RNA–Protein interactions for RNA: ENST00000478888.1

GKN1-202, Transcript of gastrokine 1, humanhuman

TSL 2

Gene GKN1, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1-202ENST00000478888 SPTAN1Q13813 2472 aaKnown RBP0.07□□□□□ -2.4
GKN1-202ENST00000478888 PKHD1L1Q86WI1 4243 aa0.06□□□□□ -2.4
GKN1-202ENST00000478888 POLR2KP53803 58 aaKnown RBP0.06□□□□□ -2.4
GKN1-202ENST00000478888 CLPSL2Q6UWE3 100 aa0.06□□□□□ -2.4
GKN1-202ENST00000478888 SAMD9LQ8IVG5 1584 aa0.06□□□□□ -2.4
GKN1-202ENST00000478888 SPRR2FQ96RM1 72 aa0.05□□□□□ -2.4
GKN1-202ENST00000478888 ANK3Q12955 4377 aaKnown RBP0.04□□□□□ -2.4
GKN1-202ENST00000478888 TOP2AP11388 1531 aaKnown RBP0.04□□□□□ -2.4
GKN1-202ENST00000478888 SPART-AS1P0CW21 52 aa0.03□□□□□ -2.4
GKN1-202ENST00000478888 NBPF19A0A087WUL8 3843 aa0.03□□□□□ -2.41
GKN1-202ENST00000478888 USP9YO00507 2555 aaPredicted RBP0.02□□□□□ -2.41
GKN1-202ENST00000478888 RANBP2P49792 3224 aaKnown RBP0.02□□□□□ -2.41
GKN1-202ENST00000478888 LAMA1P25391 3075 aa0.02□□□□□ -2.41
GKN1-202ENST00000478888 FRYQ5TBA9 3013 aa0.02□□□□□ -2.41
GKN1-202ENST00000478888 DOPEY1Q5JWR5 2465 aa0.02□□□□□ -2.41
GKN1-202ENST00000478888 PCLOQ9Y6V0 5065 aa0.02□□□□□ -2.41
GKN1-202ENST00000478888 LAMA5O15230 3695 aa0.01□□□□□ -2.41
GKN1-202ENST00000478888 WDR87Q6ZQQ6 2873 aa0.01□□□□□ -2.41
GKN1-202ENST00000478888 DNAH2Q9P225 4427 aa0.01□□□□□ -2.41
GKN1-202ENST00000478888 MUC2Q02817 5179 aa0.01□□□□□ -2.41
GKN1-202ENST00000478888 CELSR3Q9NYQ7 3312 aa0□□□□□ -2.41
GKN1-202ENST00000478888 DNAH11Q96DT5 4516 aa-0□□□□□ -2.41
GKN1-202ENST00000478888 DNAH6Q9C0G6 4158 aa-0□□□□□ -2.41
GKN1-202ENST00000478888 FAT3Q8TDW7 4589 aa-0.01□□□□□ -2.41
GKN1-202ENST00000478888 DNAH7Q8WXX0 4024 aa-0.01□□□□□ -2.41
GKN1-202ENST00000478888 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
GKN1-202ENST00000478888 KRTAP19-7Q3SYF9 63 aa-0.01□□□□□ -2.41
GKN1-202ENST00000478888 ITPR3Q14573 2671 aa-0.02□□□□□ -2.41
GKN1-202ENST00000478888 DEFB1P60022 68 aa-0.02□□□□□ -2.41
GKN1-202ENST00000478888 KRTAP8-1Q8IUC2 63 aa-0.02□□□□□ -2.41
GKN1-202ENST00000478888 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.02□□□□□ -2.41
GKN1-202ENST00000478888 ITPR1Q14643 2758 aa-0.03□□□□□ -2.41
GKN1-202ENST00000478888 SPENQ96T58 3664 aaKnown RBP-0.03□□□□□ -2.41
GKN1-202ENST00000478888 APOBP04114 4563 aaKnown RBP-0.03□□□□□ -2.41
GKN1-202ENST00000478888 CHD7Q9P2D1 2997 aa-0.03□□□□□ -2.41
GKN1-202ENST00000478888 DNAH1Q9P2D7 4330 aa-0.04□□□□□ -2.42
GKN1-202ENST00000478888 MROH2BQ7Z745 1585 aa-0.04□□□□□ -2.42
GKN1-202ENST00000478888 TRIOO75962 3097 aa-0.04□□□□□ -2.42
GKN1-202ENST00000478888 SPTBN5Q9NRC6 3674 aaKnown RBP-0.05□□□□□ -2.42
GKN1-202ENST00000478888 GCC2Q8IWJ2 1684 aa-0.05□□□□□ -2.42
GKN1-202ENST00000478888 HERC1Q15751 4861 aa-0.05□□□□□ -2.42
GKN1-202ENST00000478888 MUC12Q9UKN1 5478 aa-0.05□□□□□ -2.42
GKN1-202ENST00000478888 KRTAP19-5Q3LI72 72 aa-0.05□□□□□ -2.42
GKN1-202ENST00000478888 TOMM7Q9P0U1 55 aa-0.05□□□□□ -2.42
GKN1-202ENST00000478888 ADGRG4Q8IZF6 3080 aa-0.05□□□□□ -2.42
GKN1-202ENST00000478888 MYO9AB2RTY4 2548 aa-0.06□□□□□ -2.42
GKN1-202ENST00000478888 C5orf42Q9H799 3197 aa-0.06□□□□□ -2.42
GKN1-202ENST00000478888 DNAH8Q96JB1 4490 aa-0.06□□□□□ -2.42
GKN1-202ENST00000478888 SMR3BP02814 79 aaPredicted RBP-0.06□□□□□ -2.42
GKN1-202ENST00000478888 RPL39P62891 51 aaKnown RBP-0.06□□□□□ -2.42
GKN1-202ENST00000478888 KRTAP19-8Q3LI54 63 aa-0.06□□□□□ -2.42
GKN1-202ENST00000478888 FAT1Q14517 4588 aa-0.06□□□□□ -2.42
GKN1-202ENST00000478888 VPS13DQ5THJ4 4388 aa-0.07□□□□□ -2.42
GKN1-202ENST00000478888 CRYBG3Q68DQ2 2970 aa-0.08□□□□□ -2.42
GKN1-202ENST00000478888 LRBAP50851 2863 aa-0.08□□□□□ -2.42
GKN1-202ENST00000478888 DUOX1Q9NRD9 1551 aa-0.08□□□□□ -2.42
GKN1-202ENST00000478888 KMT2CQ8NEZ4 4911 aaKnown RBP-0.09□□□□□ -2.42
GKN1-202ENST00000478888 UBR4Q5T4S7 5183 aa-0.09□□□□□ -2.42
GKN1-202ENST00000478888 TEX15Q9BXT5 2789 aa-0.09□□□□□ -2.42
GKN1-202ENST00000478888 MGAQ8IWI9 3026 aa-0.09□□□□□ -2.42
GKN1-202ENST00000478888 CFAP46Q8IYW2 2715 aa-0.09□□□□□ -2.42
GKN1-202ENST00000478888 RYR1P21817 5038 aa-0.09□□□□□ -2.42
GKN1-202ENST00000478888 LEAP2Q969E1 77 aa-0.1□□□□□ -2.43
GKN1-202ENST00000478888 RPL39LQ96EH5 51 aaKnown RBP-0.1□□□□□ -2.43
GKN1-202ENST00000478888 STARD9Q9P2P6 4700 aa-0.1□□□□□ -2.43
GKN1-202ENST00000478888 TLN1Q9Y490 2541 aaKnown RBP-0.11□□□□□ -2.43
GKN1-202ENST00000478888 CMYA5Q8N3K9 4069 aa-0.11□□□□□ -2.43
GKN1-202ENST00000478888 SNRPGP62308 76 aaKnown RBP-0.11□□□□□ -2.43
GKN1-202ENST00000478888 MT1HP80294 61 aa-0.11□□□□□ -2.43
GKN1-202ENST00000478888 CEP250Q9BV73 2442 aa-0.11□□□□□ -2.43
GKN1-202ENST00000478888 SRCAPQ6ZRS2 3230 aa-0.11□□□□□ -2.43
GKN1-202ENST00000478888 RELNP78509 3460 aa-0.12□□□□□ -2.43
GKN1-202ENST00000478888 LAMA3Q16787 3333 aa-0.13□□□□□ -2.43
GKN1-202ENST00000478888 ZFHX4Q86UP3 3567 aa-0.13□□□□□ -2.43
GKN1-202ENST00000478888 MUC17Q685J3 4493 aa-0.14□□□□□ -2.43
GKN1-202ENST00000478888 PLECQ15149 4684 aaKnown RBP-0.14□□□□□ -2.43
GKN1-202ENST00000478888 LINC01590Q5TEZ4 76 aa-0.15□□□□□ -2.43
GKN1-202ENST00000478888 DMXL2Q8TDJ6 3036 aa-0.15□□□□□ -2.43
GKN1-202ENST00000478888 USH2AO75445 5202 aa-0.16□□□□□ -2.43
GKN1-202ENST00000478888 RNF213Q63HN8 5207 aa-0.16□□□□□ -2.43
GKN1-202ENST00000478888 CSMD1Q96PZ7 3565 aa-0.16□□□□□ -2.44
GKN1-202ENST00000478888 TRRAPQ9Y4A5 3859 aa-0.16□□□□□ -2.44
GKN1-202ENST00000478888 RYR3Q15413 4870 aa-0.16□□□□□ -2.44
GKN1-202ENST00000478888 DNAH10Q8IVF4 4471 aa-0.17□□□□□ -2.44
GKN1-202ENST00000478888 DYNC1H1Q14204 4646 aaKnown RBP-0.17□□□□□ -2.44
GKN1-202ENST00000478888 NIPBLQ6KC79 2804 aaeCLIP-0.18□□□□□ -2.44
GKN1-202ENST00000478888 RYR2Q92736 4967 aa-0.18□□□□□ -2.44
GKN1-202ENST00000478888 KIAA1109Q2LD37 5005 aa-0.19□□□□□ -2.44
GKN1-202ENST00000478888 DEFB136Q30KP8 78 aa-0.19□□□□□ -2.44
GKN1-202ENST00000478888 KRTAP20-2Q3LI61 65 aa-0.19□□□□□ -2.44
GKN1-202ENST00000478888 LAMA2P24043 3122 aaKnown RBP-0.19□□□□□ -2.44
GKN1-202ENST00000478888 MT1EP04732 61 aa-0.2□□□□□ -2.44
GKN1-202ENST00000478888 DNAH17Q9UFH2 4485 aa-0.21□□□□□ -2.44
GKN1-202ENST00000478888 HERC2O95714 4834 aa-0.21□□□□□ -2.44
GKN1-202ENST00000478888 MT4P47944 62 aa-0.21□□□□□ -2.44
GKN1-202ENST00000478888 KRTAP20-1Q3LI63 56 aa-0.21□□□□□ -2.44
GKN1-202ENST00000478888 ABCA13Q86UQ4 5058 aa-0.21□□□□□ -2.44
GKN1-202ENST00000478888 CFAP54Q96N23 3096 aa-0.22□□□□□ -2.44
GKN1-202ENST00000478888 MT1XP80297 61 aa-0.22□□□□□ -2.44
GKN1-202ENST00000478888 MT1LQ93083 61 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms