RNA–Protein interactions for RNA: ENST00000478888.1

GKN1-202, Transcript of gastrokine 1, humanhuman

TSL 2

Gene GKN1, Length 581 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1-202ENST00000478888 AEBP2Q6ZN18 517 aaPredicted RBP21.54■■□□□ 1.04
GKN1-202ENST00000478888 CHIC1Q5VXU3 224 aa20.15■□□□□ 0.82
GKN1-202ENST00000478888 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
GKN1-202ENST00000478888 SENP3Q9H4L4 574 aaPredicted RBP18.62■□□□□ 0.57
GKN1-202ENST00000478888 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
GKN1-202ENST00000478888 FOXD1Q16676 465 aa17.51■□□□□ 0.39
GKN1-202ENST00000478888 MSH5O43196 834 aa16.93■□□□□ 0.3
GKN1-202ENST00000478888 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
GKN1-202ENST00000478888 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
GKN1-202ENST00000478888 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
GKN1-202ENST00000478888 ADRA2BP18089 450 aa15.18■□□□□ 0.02
GKN1-202ENST00000478888 PLPPR3Q6T4P5 718 aa14.72□□□□□ -0.05
GKN1-202ENST00000478888 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
GKN1-202ENST00000478888 POTEHQ6S545 545 aa14.47□□□□□ -0.09
GKN1-202ENST00000478888 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
GKN1-202ENST00000478888 RNF39Q9H2S5 420 aa14.3□□□□□ -0.12
GKN1-202ENST00000478888 C1QBPQ07021 282 aaKnown RBP14.03□□□□□ -0.16
GKN1-202ENST00000478888 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
GKN1-202ENST00000478888 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
GKN1-202ENST00000478888 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
GKN1-202ENST00000478888 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
GKN1-202ENST00000478888 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
GKN1-202ENST00000478888 DSG3P32926 999 aa12.94□□□□□ -0.34
GKN1-202ENST00000478888 SP7Q8TDD2 431 aaPredicted RBP12.93□□□□□ -0.34
GKN1-202ENST00000478888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.35
GKN1-202ENST00000478888 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
GKN1-202ENST00000478888 PPP4R3CPQ6ZMV5 832 aa12.71□□□□□ -0.37
GKN1-202ENST00000478888 CAPN15O75808 1086 aa12.7□□□□□ -0.38
GKN1-202ENST00000478888 CHRDL2Q6WN34 429 aa12.65□□□□□ -0.38
GKN1-202ENST00000478888 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
GKN1-202ENST00000478888 PLSCR2Q9NRY7 297 aa12.49□□□□□ -0.41
GKN1-202ENST00000478888 U3KPZ7 1027 aaPredicted RBP12.42□□□□□ -0.42
GKN1-202ENST00000478888 RBM42Q9BTD8 480 aaKnown RBP12.41□□□□□ -0.42
GKN1-202ENST00000478888 ABCB7O75027 752 aa12.27□□□□□ -0.45
GKN1-202ENST00000478888 HAX1O00165 279 aa12.21□□□□□ -0.45
GKN1-202ENST00000478888 TRHP20396 242 aaPredicted RBP12.16□□□□□ -0.46
GKN1-202ENST00000478888 LHX8Q68G74 356 aa12.11□□□□□ -0.47
GKN1-202ENST00000478888 ZNF219Q9P2Y4 722 aaPredicted RBP12.11□□□□□ -0.47
GKN1-202ENST00000478888 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
GKN1-202ENST00000478888 APLP2Q06481 763 aa11.97□□□□□ -0.49
GKN1-202ENST00000478888 EVX2Q03828 476 aa11.93□□□□□ -0.5
GKN1-202ENST00000478888 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.52
GKN1-202ENST00000478888 AKT1S1Q96B36 256 aa11.82□□□□□ -0.52
GKN1-202ENST00000478888 FXR2P51116 673 aaKnown RBP eCLIP11.77□□□□□ -0.53
GKN1-202ENST00000478888 REM2Q8IYK8 340 aaPredicted RBP11.7□□□□□ -0.54
GKN1-202ENST00000478888 NPM3O75607 178 aaKnown RBP11.64□□□□□ -0.55
GKN1-202ENST00000478888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
GKN1-202ENST00000478888 HNRNPUL2Q1KMD3 747 aaKnown RBP11.62□□□□□ -0.55
GKN1-202ENST00000478888 GABBR2O75899 941 aa11.61□□□□□ -0.55
GKN1-202ENST00000478888 PITPNM1O00562 1244 aa11.59□□□□□ -0.55
GKN1-202ENST00000478888 POLA2Q14181 598 aa11.53□□□□□ -0.56
GKN1-202ENST00000478888 POTEMA6NI47 508 aa11.48□□□□□ -0.57
GKN1-202ENST00000478888 SAMD1Q6SPF0 538 aaPredicted RBP11.48□□□□□ -0.57
GKN1-202ENST00000478888 SLC4A2P04920 1241 aa11.46□□□□□ -0.57
GKN1-202ENST00000478888 C19orf67A6NJJ6 358 aa11.44□□□□□ -0.58
GKN1-202ENST00000478888 POTEGQ6S5H5 508 aa11.4□□□□□ -0.58
GKN1-202ENST00000478888 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
GKN1-202ENST00000478888 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
GKN1-202ENST00000478888 PRKAR2AP13861 404 aaKnown RBP11.29□□□□□ -0.6
GKN1-202ENST00000478888 OSCARQ8IYS5 282 aa11.21□□□□□ -0.61
GKN1-202ENST00000478888 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.61
GKN1-202ENST00000478888 OTUD5Q96G74 571 aa11.18□□□□□ -0.62
GKN1-202ENST00000478888 DCBLD2Q96PD2 775 aa11.02□□□□□ -0.65
GKN1-202ENST00000478888 CLCN6P51797 869 aa11□□□□□ -0.65
GKN1-202ENST00000478888 POTEB2H3BUK9 544 aa10.93□□□□□ -0.66
GKN1-202ENST00000478888 CLEC11AQ9Y240 323 aa10.93□□□□□ -0.66
GKN1-202ENST00000478888 SPDYE1Q8NFV5 336 aaPredicted RBP10.88□□□□□ -0.67
GKN1-202ENST00000478888 CHADLQ6NUI6 762 aa10.86□□□□□ -0.67
GKN1-202ENST00000478888 CD44P16070 742 aaKnown RBP10.85□□□□□ -0.67
GKN1-202ENST00000478888 LCE2DQ5TA82 110 aaPredicted RBP10.83□□□□□ -0.68
GKN1-202ENST00000478888 MYCNP04198 464 aaPredicted RBP10.81□□□□□ -0.68
GKN1-202ENST00000478888 SPDYE2BA6NHP3 402 aa10.74□□□□□ -0.69
GKN1-202ENST00000478888 SPDYE6P0CI01 402 aa10.74□□□□□ -0.69
GKN1-202ENST00000478888 SPDYE2Q495Y8 402 aa10.74□□□□□ -0.69
GKN1-202ENST00000478888 FAM163AQ96GL9 167 aaPredicted RBP10.73□□□□□ -0.69
GKN1-202ENST00000478888 CDAN1Q8IWY9 1227 aa10.68□□□□□ -0.7
GKN1-202ENST00000478888 ATF5Q9Y2D1 282 aaPredicted RBP10.64□□□□□ -0.71
GKN1-202ENST00000478888 ZNF579Q8NAF0 562 aaKnown RBP10.61□□□□□ -0.71
GKN1-202ENST00000478888 MAMSTRQ6ZN01 415 aa10.58□□□□□ -0.72
GKN1-202ENST00000478888 GALR2O43603 387 aaPredicted RBP10.57□□□□□ -0.72
GKN1-202ENST00000478888 MMRN1Q13201 1228 aa10.57□□□□□ -0.72
GKN1-202ENST00000478888 PRR29P0C7W0 189 aa10.56□□□□□ -0.72
GKN1-202ENST00000478888 FARP1Q9Y4F1 1045 aaPredicted RBP10.56□□□□□ -0.72
GKN1-202ENST00000478888 POTEJP0CG39 1038 aa10.55□□□□□ -0.72
GKN1-202ENST00000478888 PELP1Q8IZL8 1130 aaKnown RBP10.48□□□□□ -0.73
GKN1-202ENST00000478888 ZRANB1Q9UGI0 708 aa10.48□□□□□ -0.73
GKN1-202ENST00000478888 SPNS2Q8IVW8 549 aa10.44□□□□□ -0.74
GKN1-202ENST00000478888 SCUBE2Q9NQ36 999 aa10.44□□□□□ -0.74
GKN1-202ENST00000478888 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
GKN1-202ENST00000478888 SSUH2Q9Y2M2 353 aa10.43□□□□□ -0.74
GKN1-202ENST00000478888 ZNF692Q9BU19 519 aaPredicted RBP10.39□□□□□ -0.75
GKN1-202ENST00000478888 C7P10643 843 aa10.37□□□□□ -0.75
GKN1-202ENST00000478888 FBLN2P98095 1184 aa10.35□□□□□ -0.75
GKN1-202ENST00000478888 SLC39A7Q92504 469 aa10.35□□□□□ -0.75
GKN1-202ENST00000478888 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
GKN1-202ENST00000478888 ATMINO43313 823 aaPredicted RBP10.21□□□□□ -0.77
GKN1-202ENST00000478888 KCNA4P22459 653 aa10.2□□□□□ -0.78
GKN1-202ENST00000478888 PHF12Q96QT6 1004 aa10.2□□□□□ -0.78
GKN1-202ENST00000478888 PABPN1Q86U42 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
GKN1-202ENST00000478888 ST18O60284 1047 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms