RNA–Protein interactions for RNA: ENST00000478576.5

GFM1-208, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2 BASIC

Gene GFM1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-208ENST00000478576 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
GFM1-208ENST00000478576 KRTAP17-1Q9BYP8 105 aa8.33□□□□□ -1.08
GFM1-208ENST00000478576 MT1HL1P0DM35 61 aa8.32□□□□□ -1.08
GFM1-208ENST00000478576 CSAG1Q6PB30 78 aa8.3□□□□□ -1.08
GFM1-208ENST00000478576 KRTAP10-6P60371 365 aaPredicted RBP8.29□□□□□ -1.08
GFM1-208ENST00000478576 LINC01554Q52M75 96 aa8.29□□□□□ -1.08
GFM1-208ENST00000478576 DMBT1Q9UGM3 2413 aaPredicted RBP8.28□□□□□ -1.08
GFM1-208ENST00000478576 S4R3F8 94 aa8.27□□□□□ -1.08
GFM1-208ENST00000478576 RYR1P21817 5038 aa8.27□□□□□ -1.09
GFM1-208ENST00000478576 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
GFM1-208ENST00000478576 K7ERS5 55 aa8.23□□□□□ -1.09
GFM1-208ENST00000478576 TPRXLQ17RH7 258 aa8.16□□□□□ -1.1
GFM1-208ENST00000478576 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
GFM1-208ENST00000478576 KRTAP25-1Q3LHN0 102 aa8.14□□□□□ -1.11
GFM1-208ENST00000478576 RYR3Q15413 4870 aa8.13□□□□□ -1.11
GFM1-208ENST00000478576 MYCBP2O75592 4640 aa8.1□□□□□ -1.11
GFM1-208ENST00000478576 P0C880 135 aa8.09□□□□□ -1.11
GFM1-208ENST00000478576 KIAA1109Q2LD37 5005 aa8.06□□□□□ -1.12
GFM1-208ENST00000478576 ROMO1P60602 79 aa8.05□□□□□ -1.12
GFM1-208ENST00000478576 A0A0D9SG42 100 aa8.03□□□□□ -1.12
GFM1-208ENST00000478576 LRP2P98164 4655 aa7.92□□□□□ -1.14
GFM1-208ENST00000478576 LPAP08519 4548 aa7.91□□□□□ -1.14
GFM1-208ENST00000478576 M0QZ58 72 aa7.91□□□□□ -1.14
GFM1-208ENST00000478576 CRIPTQ9P021 101 aa7.9□□□□□ -1.14
GFM1-208ENST00000478576 KRTAP12-2P59991 146 aa7.89□□□□□ -1.15
GFM1-208ENST00000478576 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
GFM1-208ENST00000478576 KRTAP4-5Q9BYR2 181 aa7.88□□□□□ -1.15
GFM1-208ENST00000478576 EPPK1P58107 5090 aaKnown RBP7.84□□□□□ -1.15
GFM1-208ENST00000478576 SEC61BP60468 96 aaKnown RBP7.83□□□□□ -1.16
GFM1-208ENST00000478576 SPINT4Q6UDR6 99 aa7.78□□□□□ -1.16
GFM1-208ENST00000478576 ABCA13Q86UQ4 5058 aa7.75□□□□□ -1.17
GFM1-208ENST00000478576 KRTAP4-1Q9BYQ7 146 aa7.69□□□□□ -1.18
GFM1-208ENST00000478576 MUC17Q685J3 4493 aa7.68□□□□□ -1.18
GFM1-208ENST00000478576 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
GFM1-208ENST00000478576 J3QL48 77 aa7.65□□□□□ -1.18
GFM1-208ENST00000478576 R4GN34 69 aa7.65□□□□□ -1.18
GFM1-208ENST00000478576 KRTAP19-2Q3LHN2 52 aa7.63□□□□□ -1.19
GFM1-208ENST00000478576 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
GFM1-208ENST00000478576 HERC2O95714 4834 aa7.43□□□□□ -1.22
GFM1-208ENST00000478576 KRTAP15-1Q3LI76 137 aa7.42□□□□□ -1.22
GFM1-208ENST00000478576 H3BS24 57 aa7.4□□□□□ -1.23
GFM1-208ENST00000478576 BIRC6Q9NR09 4857 aa7.3□□□□□ -1.24
GFM1-208ENST00000478576 FLGP20930 4061 aaPredicted RBP7.3□□□□□ -1.24
GFM1-208ENST00000478576 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
GFM1-208ENST00000478576 PP632Q6XCG6 107 aa7.2□□□□□ -1.26
GFM1-208ENST00000478576 LCE2CQ5TA81 110 aa7.15□□□□□ -1.26
GFM1-208ENST00000478576 HERC1Q15751 4861 aa7.13□□□□□ -1.27
GFM1-208ENST00000478576 MUC2Q02817 5179 aa7.13□□□□□ -1.27
GFM1-208ENST00000478576 NDUFAF8A1L188 74 aa7.12□□□□□ -1.27
GFM1-208ENST00000478576 PLAC4Q8WY50 150 aa7.1□□□□□ -1.27
GFM1-208ENST00000478576 HMCN2Q8NDA2 5059 aa7.06□□□□□ -1.28
GFM1-208ENST00000478576 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
GFM1-208ENST00000478576 SPRR2GQ9BYE4 73 aa7.04□□□□□ -1.28
GFM1-208ENST00000478576 TNP1P09430 55 aa7.02□□□□□ -1.29
GFM1-208ENST00000478576 PCLOQ9Y6V0 5065 aa6.99□□□□□ -1.29
GFM1-208ENST00000478576 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
GFM1-208ENST00000478576 MT1HP80294 61 aa6.94□□□□□ -1.3
GFM1-208ENST00000478576 M0R2T5 61 aa6.88□□□□□ -1.31
GFM1-208ENST00000478576 MT2AP02795 61 aa6.83□□□□□ -1.32
GFM1-208ENST00000478576 MT1FP04733 61 aa6.82□□□□□ -1.32
GFM1-208ENST00000478576 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
GFM1-208ENST00000478576 KRTAP9-8Q9BYQ0 159 aa6.8□□□□□ -1.32
GFM1-208ENST00000478576 KRTAP10-10P60014 251 aa6.77□□□□□ -1.33
GFM1-208ENST00000478576 KRTAP19-8Q3LI54 63 aa6.74□□□□□ -1.33
GFM1-208ENST00000478576 LUZP6Q538Z0 58 aa6.74□□□□□ -1.33
GFM1-208ENST00000478576 RNF213Q63HN8 5207 aa6.73□□□□□ -1.33
GFM1-208ENST00000478576 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
GFM1-208ENST00000478576 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
GFM1-208ENST00000478576 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
GFM1-208ENST00000478576 MT1BP07438 61 aa6.62□□□□□ -1.35
GFM1-208ENST00000478576 KRTAP10-5P60370 271 aa6.56□□□□□ -1.36
GFM1-208ENST00000478576 MT1XP80297 61 aa6.55□□□□□ -1.36
GFM1-208ENST00000478576 KRTAP8-1Q8IUC2 63 aa6.54□□□□□ -1.36
GFM1-208ENST00000478576 KRTAP9-3Q9BYQ3 159 aa6.52□□□□□ -1.37
GFM1-208ENST00000478576 KRTAP10-12P60413 245 aa6.4□□□□□ -1.38
GFM1-208ENST00000478576 A0A0A0MQY5 61 aa6.38□□□□□ -1.39
GFM1-208ENST00000478576 KRTAP12-3P60328 96 aa6.34□□□□□ -1.4
GFM1-208ENST00000478576 KRTAP10-7P60409 375 aaPredicted RBP6.33□□□□□ -1.4
GFM1-208ENST00000478576 PRO2289Q9P1D8 64 aa6.33□□□□□ -1.4
GFM1-208ENST00000478576 LCE2BO14633 110 aa6.23□□□□□ -1.41
GFM1-208ENST00000478576 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
GFM1-208ENST00000478576 KRTAP19-5Q3LI72 72 aa6.07□□□□□ -1.44
GFM1-208ENST00000478576 LCE2DQ5TA82 110 aaPredicted RBP6.05□□□□□ -1.44
GFM1-208ENST00000478576 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
GFM1-208ENST00000478576 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
GFM1-208ENST00000478576 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
GFM1-208ENST00000478576 INE1O15225 51 aa5.86□□□□□ -1.47
GFM1-208ENST00000478576 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.47
GFM1-208ENST00000478576 USH2AO75445 5202 aa5.83□□□□□ -1.48
GFM1-208ENST00000478576 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
GFM1-208ENST00000478576 KMT2DO14686 5537 aa5.75□□□□□ -1.49
GFM1-208ENST00000478576 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
GFM1-208ENST00000478576 MT1EP04732 61 aa5.68□□□□□ -1.5
GFM1-208ENST00000478576 MT1LQ93083 61 aa5.67□□□□□ -1.5
GFM1-208ENST00000478576 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
GFM1-208ENST00000478576 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
GFM1-208ENST00000478576 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
GFM1-208ENST00000478576 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
GFM1-208ENST00000478576 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
GFM1-208ENST00000478576 KRTAP2-1Q9BYU5 128 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms