RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 LINC00304Q8N9R0 145 aa6.77□□□□□ -1.33
XPC-205ENST00000476581 MT1HL1P0DM35 61 aa6.77□□□□□ -1.33
XPC-205ENST00000476581 HERC1Q15751 4861 aa6.72□□□□□ -1.33
XPC-205ENST00000476581 LPAP08519 4548 aa6.72□□□□□ -1.33
XPC-205ENST00000476581 IGKV2-30P06310 120 aa6.71□□□□□ -1.33
XPC-205ENST00000476581 SPINK1P00995 79 aa6.71□□□□□ -1.34
XPC-205ENST00000476581 ROMO1P60602 79 aa6.68□□□□□ -1.34
XPC-205ENST00000476581 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
XPC-205ENST00000476581 A8MUU9 505 aa6.64□□□□□ -1.35
XPC-205ENST00000476581 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
XPC-205ENST00000476581 LRP2P98164 4655 aa6.6□□□□□ -1.35
XPC-205ENST00000476581 IGKV2D-30A0A075B6S6 120 aa6.59□□□□□ -1.36
XPC-205ENST00000476581 C9orf92A6NGG3 77 aa6.58□□□□□ -1.36
XPC-205ENST00000476581 H0YAA0 97 aa6.55□□□□□ -1.36
XPC-205ENST00000476581 KRTAP16-1A8MUX0 517 aa6.54□□□□□ -1.36
XPC-205ENST00000476581 J3QL48 77 aa6.51□□□□□ -1.37
XPC-205ENST00000476581 P0C880 135 aa6.49□□□□□ -1.37
XPC-205ENST00000476581 HMCN2Q8NDA2 5059 aa6.48□□□□□ -1.37
XPC-205ENST00000476581 A0A1B0GU33 70 aa6.44□□□□□ -1.38
XPC-205ENST00000476581 MUC2Q02817 5179 aa6.41□□□□□ -1.38
XPC-205ENST00000476581 H1FX-AS1Q4G0G2 97 aa6.4□□□□□ -1.38
XPC-205ENST00000476581 XP32Q5T750 250 aa6.39□□□□□ -1.39
XPC-205ENST00000476581 CRIPTQ9P021 101 aa6.38□□□□□ -1.39
XPC-205ENST00000476581 K7ERS5 55 aa6.36□□□□□ -1.39
XPC-205ENST00000476581 C20orf166-AS1Q96NR2 134 aa6.36□□□□□ -1.39
XPC-205ENST00000476581 TPRXLQ17RH7 258 aa6.32□□□□□ -1.4
XPC-205ENST00000476581 UBR4Q5T4S7 5183 aa6.31□□□□□ -1.4
XPC-205ENST00000476581 MUC17Q685J3 4493 aa6.3□□□□□ -1.4
XPC-205ENST00000476581 RPL37P61927 97 aaKnown RBP6.28□□□□□ -1.4
XPC-205ENST00000476581 SPINT4Q6UDR6 99 aa6.27□□□□□ -1.41
XPC-205ENST00000476581 RNF213Q63HN8 5207 aa6.26□□□□□ -1.41
XPC-205ENST00000476581 COX6B2Q6YFQ2 88 aa6.25□□□□□ -1.41
XPC-205ENST00000476581 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
XPC-205ENST00000476581 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
XPC-205ENST00000476581 NDUFAF8A1L188 74 aa6.21□□□□□ -1.42
XPC-205ENST00000476581 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
XPC-205ENST00000476581 FAT4Q6V0I7 4981 aa6.11□□□□□ -1.43
XPC-205ENST00000476581 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.43
XPC-205ENST00000476581 KRTAP10-6P60371 365 aaPredicted RBP6.06□□□□□ -1.44
XPC-205ENST00000476581 SEC61BP60468 96 aaKnown RBP6.05□□□□□ -1.44
XPC-205ENST00000476581 KRTAP13-4Q3LI77 160 aa6.05□□□□□ -1.44
XPC-205ENST00000476581 A0A0A0MQY5 61 aa6.05□□□□□ -1.44
XPC-205ENST00000476581 A0A0D9SG42 100 aa6.03□□□□□ -1.44
XPC-205ENST00000476581 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
XPC-205ENST00000476581 KRTAP19-2Q3LHN2 52 aa5.97□□□□□ -1.45
XPC-205ENST00000476581 KRTAP3-2Q9BYR7 98 aa5.97□□□□□ -1.45
XPC-205ENST00000476581 S4R3F8 94 aa5.96□□□□□ -1.46
XPC-205ENST00000476581 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
XPC-205ENST00000476581 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
XPC-205ENST00000476581 LCE2CQ5TA81 110 aa5.85□□□□□ -1.47
XPC-205ENST00000476581 KRTAP12-1P59990 96 aa5.84□□□□□ -1.48
XPC-205ENST00000476581 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
XPC-205ENST00000476581 MT1HP80294 61 aa5.71□□□□□ -1.5
XPC-205ENST00000476581 PLAC4Q8WY50 150 aa5.69□□□□□ -1.5
XPC-205ENST00000476581 M0QZ58 72 aa5.68□□□□□ -1.5
XPC-205ENST00000476581 M0R2T5 61 aa5.59□□□□□ -1.51
XPC-205ENST00000476581 LORP23490 312 aaPredicted RBP5.58□□□□□ -1.52
XPC-205ENST00000476581 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
XPC-205ENST00000476581 KRTAP9-8Q9BYQ0 159 aa5.5□□□□□ -1.53
XPC-205ENST00000476581 MT1FP04733 61 aa5.47□□□□□ -1.53
XPC-205ENST00000476581 MT2AP02795 61 aa5.46□□□□□ -1.54
XPC-205ENST00000476581 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
XPC-205ENST00000476581 R4GN34 69 aa5.41□□□□□ -1.54
XPC-205ENST00000476581 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
XPC-205ENST00000476581 USH2AO75445 5202 aa5.35□□□□□ -1.55
XPC-205ENST00000476581 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
XPC-205ENST00000476581 KRTAP9-3Q9BYQ3 159 aa5.29□□□□□ -1.56
XPC-205ENST00000476581 SPRR5A0A1B0GTR4 108 aa5.27□□□□□ -1.57
XPC-205ENST00000476581 FSIP2Q5CZC0 6907 aa5.26□□□□□ -1.57
XPC-205ENST00000476581 SPRR2GQ9BYE4 73 aa5.25□□□□□ -1.57
XPC-205ENST00000476581 LCE2BO14633 110 aa5.21□□□□□ -1.58
XPC-205ENST00000476581 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
XPC-205ENST00000476581 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
XPC-205ENST00000476581 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
XPC-205ENST00000476581 MT1BP07438 61 aa5.14□□□□□ -1.59
XPC-205ENST00000476581 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
XPC-205ENST00000476581 SSPOA2VEC9 5147 aa5.11□□□□□ -1.59
XPC-205ENST00000476581 TNP1P09430 55 aa5.08□□□□□ -1.6
XPC-205ENST00000476581 INE1O15225 51 aa5.02□□□□□ -1.61
XPC-205ENST00000476581 MT1XP80297 61 aa4.96□□□□□ -1.62
XPC-205ENST00000476581 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
XPC-205ENST00000476581 KMT2DO14686 5537 aa4.94□□□□□ -1.62
XPC-205ENST00000476581 LCE2DQ5TA82 110 aaPredicted RBP4.94□□□□□ -1.62
XPC-205ENST00000476581 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.63
XPC-205ENST00000476581 FCGBPQ9Y6R7 5405 aaPredicted RBP4.87□□□□□ -1.63
XPC-205ENST00000476581 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
XPC-205ENST00000476581 KRTAP19-6Q3LI70 58 aa4.79□□□□□ -1.64
XPC-205ENST00000476581 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
XPC-205ENST00000476581 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
XPC-205ENST00000476581 KRTAP4-8A0A0G2JLE6 195 aa4.69□□□□□ -1.66
XPC-205ENST00000476581 KRTAP4-8Q9BYQ9 185 aa4.69□□□□□ -1.66
XPC-205ENST00000476581 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
XPC-205ENST00000476581 KRTAP8-1Q8IUC2 63 aa4.65□□□□□ -1.67
XPC-205ENST00000476581 KRTAP10-12P60413 245 aa4.64□□□□□ -1.67
XPC-205ENST00000476581 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
XPC-205ENST00000476581 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
XPC-205ENST00000476581 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
XPC-205ENST00000476581 KRTAP9-6A0A140TA67 174 aa4.49□□□□□ -1.69
XPC-205ENST00000476581 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
XPC-205ENST00000476581 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms