RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 PRAC1Q96KF2 57 aa8.79□□□□□ -1
TVP23B-202ENST00000476139 MT1HL1P0DM35 61 aa8.76□□□□□ -1.01
TVP23B-202ENST00000476139 XP32Q5T750 250 aa8.71□□□□□ -1.01
TVP23B-202ENST00000476139 RPL37P61927 97 aaKnown RBP8.68□□□□□ -1.02
TVP23B-202ENST00000476139 COX6B2Q6YFQ2 88 aa8.66□□□□□ -1.02
TVP23B-202ENST00000476139 LPAP08519 4548 aa8.66□□□□□ -1.02
TVP23B-202ENST00000476139 ABCA13Q86UQ4 5058 aa8.64□□□□□ -1.03
TVP23B-202ENST00000476139 H0YAA0 97 aa8.62□□□□□ -1.03
TVP23B-202ENST00000476139 KRTAP4-5Q9BYR2 181 aa8.62□□□□□ -1.03
TVP23B-202ENST00000476139 LRP2P98164 4655 aa8.6□□□□□ -1.03
TVP23B-202ENST00000476139 A0A1B0GU33 70 aa8.58□□□□□ -1.04
TVP23B-202ENST00000476139 H1FX-AS1Q4G0G2 97 aa8.52□□□□□ -1.04
TVP23B-202ENST00000476139 CSAG1Q6PB30 78 aa8.48□□□□□ -1.05
TVP23B-202ENST00000476139 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
TVP23B-202ENST00000476139 TPRXLQ17RH7 258 aa8.43□□□□□ -1.06
TVP23B-202ENST00000476139 S4R3F8 94 aa8.37□□□□□ -1.07
TVP23B-202ENST00000476139 A0A0D9SG42 100 aa8.34□□□□□ -1.08
TVP23B-202ENST00000476139 LINC01554Q52M75 96 aa8.34□□□□□ -1.08
TVP23B-202ENST00000476139 CRIPTQ9P021 101 aa8.34□□□□□ -1.08
TVP23B-202ENST00000476139 HERC2O95714 4834 aa8.33□□□□□ -1.08
TVP23B-202ENST00000476139 KRTAP10-6P60371 365 aaPredicted RBP8.33□□□□□ -1.08
TVP23B-202ENST00000476139 KRTAP13-4Q3LI77 160 aa8.31□□□□□ -1.08
TVP23B-202ENST00000476139 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
TVP23B-202ENST00000476139 P0C880 135 aa8.26□□□□□ -1.09
TVP23B-202ENST00000476139 K7ERS5 55 aa8.24□□□□□ -1.09
TVP23B-202ENST00000476139 J3QL48 77 aa8.23□□□□□ -1.09
TVP23B-202ENST00000476139 KRTAP25-1Q3LHN0 102 aa8.16□□□□□ -1.1
TVP23B-202ENST00000476139 MUC17Q685J3 4493 aa8.14□□□□□ -1.11
TVP23B-202ENST00000476139 MUC2Q02817 5179 aa8.14□□□□□ -1.11
TVP23B-202ENST00000476139 H3BS24 57 aa8.13□□□□□ -1.11
TVP23B-202ENST00000476139 KRTAP4-1Q9BYQ7 146 aa8.13□□□□□ -1.11
TVP23B-202ENST00000476139 BIRC6Q9NR09 4857 aa8.12□□□□□ -1.11
TVP23B-202ENST00000476139 SEC61BP60468 96 aaKnown RBP8.11□□□□□ -1.11
TVP23B-202ENST00000476139 ROMO1P60602 79 aa8.07□□□□□ -1.12
TVP23B-202ENST00000476139 PCLOQ9Y6V0 5065 aa8.04□□□□□ -1.12
TVP23B-202ENST00000476139 HERC1Q15751 4861 aa8.03□□□□□ -1.12
TVP23B-202ENST00000476139 KRTAP12-2P59991 146 aa8.03□□□□□ -1.12
TVP23B-202ENST00000476139 SPINT4Q6UDR6 99 aa8.03□□□□□ -1.12
TVP23B-202ENST00000476139 C10orf95Q9H7T3 257 aa7.97□□□□□ -1.13
TVP23B-202ENST00000476139 KRTAP12-1P59990 96 aa7.92□□□□□ -1.14
TVP23B-202ENST00000476139 KRTAP19-2Q3LHN2 52 aa7.91□□□□□ -1.14
TVP23B-202ENST00000476139 M0QZ58 72 aa7.86□□□□□ -1.15
TVP23B-202ENST00000476139 HMCN2Q8NDA2 5059 aa7.84□□□□□ -1.15
TVP23B-202ENST00000476139 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
TVP23B-202ENST00000476139 R4GN34 69 aa7.79□□□□□ -1.16
TVP23B-202ENST00000476139 FAT4Q6V0I7 4981 aa7.72□□□□□ -1.17
TVP23B-202ENST00000476139 FLGP20930 4061 aaPredicted RBP7.7□□□□□ -1.18
TVP23B-202ENST00000476139 RNF213Q63HN8 5207 aa7.64□□□□□ -1.19
TVP23B-202ENST00000476139 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
TVP23B-202ENST00000476139 LCE2CQ5TA81 110 aa7.54□□□□□ -1.2
TVP23B-202ENST00000476139 KRTAP15-1Q3LI76 137 aa7.42□□□□□ -1.22
TVP23B-202ENST00000476139 CAMK2N1Q7Z7J9 78 aa7.41□□□□□ -1.22
TVP23B-202ENST00000476139 M0R2T5 61 aa7.36□□□□□ -1.23
TVP23B-202ENST00000476139 MT1HP80294 61 aa7.35□□□□□ -1.23
TVP23B-202ENST00000476139 NDUFAF8A1L188 74 aa7.34□□□□□ -1.23
TVP23B-202ENST00000476139 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
TVP23B-202ENST00000476139 SPRR2GQ9BYE4 73 aa7.2□□□□□ -1.26
TVP23B-202ENST00000476139 PLAC4Q8WY50 150 aa7.18□□□□□ -1.26
TVP23B-202ENST00000476139 MT1FP04733 61 aa7.17□□□□□ -1.26
TVP23B-202ENST00000476139 MT2AP02795 61 aa7.16□□□□□ -1.26
TVP23B-202ENST00000476139 KRTAP9-8Q9BYQ0 159 aa7.16□□□□□ -1.26
TVP23B-202ENST00000476139 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
TVP23B-202ENST00000476139 TNP1P09430 55 aa7.04□□□□□ -1.28
TVP23B-202ENST00000476139 PP632Q6XCG6 107 aa7.03□□□□□ -1.28
TVP23B-202ENST00000476139 KRTAP19-8Q3LI54 63 aa6.89□□□□□ -1.31
TVP23B-202ENST00000476139 MT1BP07438 61 aa6.87□□□□□ -1.31
TVP23B-202ENST00000476139 KRTAP9-3Q9BYQ3 159 aa6.85□□□□□ -1.31
TVP23B-202ENST00000476139 LUZP6Q538Z0 58 aa6.81□□□□□ -1.32
TVP23B-202ENST00000476139 KRTAP23-1A1A580 65 aa6.79□□□□□ -1.32
TVP23B-202ENST00000476139 A0A0A0MQY5 61 aa6.78□□□□□ -1.32
TVP23B-202ENST00000476139 KRTAP10-5P60370 271 aa6.78□□□□□ -1.32
TVP23B-202ENST00000476139 MT1XP80297 61 aa6.76□□□□□ -1.33
TVP23B-202ENST00000476139 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
TVP23B-202ENST00000476139 USH2AO75445 5202 aa6.74□□□□□ -1.33
TVP23B-202ENST00000476139 LCE2AQ5TA79 106 aaPredicted RBP6.66□□□□□ -1.34
TVP23B-202ENST00000476139 LCE2BO14633 110 aa6.65□□□□□ -1.34
TVP23B-202ENST00000476139 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.35
TVP23B-202ENST00000476139 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
TVP23B-202ENST00000476139 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
TVP23B-202ENST00000476139 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
TVP23B-202ENST00000476139 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
TVP23B-202ENST00000476139 KMT2DO14686 5537 aa6.47□□□□□ -1.37
TVP23B-202ENST00000476139 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
TVP23B-202ENST00000476139 FSIP2Q5CZC0 6907 aa6.35□□□□□ -1.39
TVP23B-202ENST00000476139 KRTAP4-8A0A0G2JLE6 195 aa6.29□□□□□ -1.4
TVP23B-202ENST00000476139 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
TVP23B-202ENST00000476139 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
TVP23B-202ENST00000476139 SSPOA2VEC9 5147 aa6.2□□□□□ -1.42
TVP23B-202ENST00000476139 KRTAP19-7Q3SYF9 63 aa6.04□□□□□ -1.44
TVP23B-202ENST00000476139 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
TVP23B-202ENST00000476139 KRTAP19-6Q3LI70 58 aa5.97□□□□□ -1.45
TVP23B-202ENST00000476139 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
TVP23B-202ENST00000476139 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
TVP23B-202ENST00000476139 MT1EP04732 61 aa5.85□□□□□ -1.47
TVP23B-202ENST00000476139 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.47
TVP23B-202ENST00000476139 MT1LQ93083 61 aa5.82□□□□□ -1.48
TVP23B-202ENST00000476139 MUC12Q9UKN1 5478 aa5.76□□□□□ -1.49
TVP23B-202ENST00000476139 LCE2DQ5TA82 110 aaPredicted RBP5.75□□□□□ -1.49
TVP23B-202ENST00000476139 INE1O15225 51 aa5.69□□□□□ -1.5
TVP23B-202ENST00000476139 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms