RNA–Protein interactions for RNA: ENST00000475971.5

SUN1-229, Transcript of Sad1 and UNC84 domain containing 1, humanhuman

TSL 1 (best)

Gene SUN1, Length 4,038 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUN1-229ENST00000475971 LRP1Q07954 4544 aaKnown RBP5.06□□□□□ -1.6
SUN1-229ENST00000475971 NOTCH2NLQ7Z3S9 236 aa5.05□□□□□ -1.6
SUN1-229ENST00000475971 MYCBP2O75592 4640 aa5.03□□□□□ -1.6
SUN1-229ENST00000475971 KRTAP10-4P60372 401 aaPredicted RBP5.01□□□□□ -1.61
SUN1-229ENST00000475971 Q5W150 140 aa5.01□□□□□ -1.61
SUN1-229ENST00000475971 DMAC1Q96GE9 116 aa5.01□□□□□ -1.61
SUN1-229ENST00000475971 C20orf166-AS1Q96NR2 134 aa4.99□□□□□ -1.61
SUN1-229ENST00000475971 HSPG2P98160 4391 aa4.98□□□□□ -1.61
SUN1-229ENST00000475971 FAT3Q8TDW7 4589 aa4.96□□□□□ -1.62
SUN1-229ENST00000475971 A0A0D9SG42 100 aa4.94□□□□□ -1.62
SUN1-229ENST00000475971 HERC2O95714 4834 aa4.93□□□□□ -1.62
SUN1-229ENST00000475971 A0A1B0GU33 70 aa4.92□□□□□ -1.62
SUN1-229ENST00000475971 KRTAP10-8P60410 259 aa4.92□□□□□ -1.62
SUN1-229ENST00000475971 LUZP6Q538Z0 58 aa4.91□□□□□ -1.62
SUN1-229ENST00000475971 PKHD1L1Q86WI1 4243 aa4.9□□□□□ -1.62
SUN1-229ENST00000475971 BIRC6Q9NR09 4857 aa4.89□□□□□ -1.63
SUN1-229ENST00000475971 MT1HL1P0DM35 61 aa4.88□□□□□ -1.63
SUN1-229ENST00000475971 ABCA13Q86UQ4 5058 aa4.87□□□□□ -1.63
SUN1-229ENST00000475971 H0YAA0 97 aa4.87□□□□□ -1.63
SUN1-229ENST00000475971 KRTAP13-3Q3SY46 172 aa4.81□□□□□ -1.64
SUN1-229ENST00000475971 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
SUN1-229ENST00000475971 RPS29P62273 56 aaKnown RBP4.78□□□□□ -1.64
SUN1-229ENST00000475971 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
SUN1-229ENST00000475971 XP32Q5T750 250 aa4.75□□□□□ -1.65
SUN1-229ENST00000475971 COX6B2Q6YFQ2 88 aa4.75□□□□□ -1.65
SUN1-229ENST00000475971 TPRXLQ17RH7 258 aa4.75□□□□□ -1.65
SUN1-229ENST00000475971 HERC1Q15751 4861 aa4.73□□□□□ -1.65
SUN1-229ENST00000475971 LRP2P98164 4655 aa4.73□□□□□ -1.65
SUN1-229ENST00000475971 TNXBP22105 4242 aa4.73□□□□□ -1.65
SUN1-229ENST00000475971 H1FX-AS1Q4G0G2 97 aa4.72□□□□□ -1.65
SUN1-229ENST00000475971 PCLOQ9Y6V0 5065 aa4.72□□□□□ -1.65
SUN1-229ENST00000475971 S4R3F8 94 aa4.71□□□□□ -1.66
SUN1-229ENST00000475971 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
SUN1-229ENST00000475971 LPAP08519 4548 aa4.68□□□□□ -1.66
SUN1-229ENST00000475971 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
SUN1-229ENST00000475971 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
SUN1-229ENST00000475971 R4GN34 69 aa4.61□□□□□ -1.67
SUN1-229ENST00000475971 M0R2T5 61 aa4.56□□□□□ -1.68
SUN1-229ENST00000475971 M0QZ58 72 aa4.55□□□□□ -1.68
SUN1-229ENST00000475971 RNF213Q63HN8 5207 aa4.54□□□□□ -1.68
SUN1-229ENST00000475971 MUC2Q02817 5179 aa4.53□□□□□ -1.68
SUN1-229ENST00000475971 UBR4Q5T4S7 5183 aa4.52□□□□□ -1.69
SUN1-229ENST00000475971 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
SUN1-229ENST00000475971 KRTAP3-1Q9BYR8 98 aa4.44□□□□□ -1.7
SUN1-229ENST00000475971 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
SUN1-229ENST00000475971 HMCN2Q8NDA2 5059 aa4.42□□□□□ -1.7
SUN1-229ENST00000475971 PLAC4Q8WY50 150 aa4.39□□□□□ -1.71
SUN1-229ENST00000475971 FAT4Q6V0I7 4981 aa4.37□□□□□ -1.71
SUN1-229ENST00000475971 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
SUN1-229ENST00000475971 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
SUN1-229ENST00000475971 KRTAP3-2Q9BYR7 98 aa4.26□□□□□ -1.73
SUN1-229ENST00000475971 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
SUN1-229ENST00000475971 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
SUN1-229ENST00000475971 KRTAP3-3Q9BYR6 98 aa4.23□□□□□ -1.73
SUN1-229ENST00000475971 KRTAP10-10P60014 251 aa4.21□□□□□ -1.74
SUN1-229ENST00000475971 TNP1P09430 55 aa4.18□□□□□ -1.74
SUN1-229ENST00000475971 MT1HP80294 61 aa4.14□□□□□ -1.75
SUN1-229ENST00000475971 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
SUN1-229ENST00000475971 LORP23490 312 aaPredicted RBP4.12□□□□□ -1.75
SUN1-229ENST00000475971 KRTAP19-2Q3LHN2 52 aa4.11□□□□□ -1.75
SUN1-229ENST00000475971 LCE2CQ5TA81 110 aa4.11□□□□□ -1.75
SUN1-229ENST00000475971 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
SUN1-229ENST00000475971 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.75
SUN1-229ENST00000475971 FLGP20930 4061 aaPredicted RBP4.05□□□□□ -1.76
SUN1-229ENST00000475971 MT2AP02795 61 aa3.98□□□□□ -1.77
SUN1-229ENST00000475971 MT1FP04733 61 aa3.98□□□□□ -1.77
SUN1-229ENST00000475971 KRTAP9-8Q9BYQ0 159 aa3.91□□□□□ -1.78
SUN1-229ENST00000475971 USH2AO75445 5202 aa3.9□□□□□ -1.78
SUN1-229ENST00000475971 INE1O15225 51 aa3.85□□□□□ -1.79
SUN1-229ENST00000475971 LCE2AQ5TA79 106 aaPredicted RBP3.85□□□□□ -1.79
SUN1-229ENST00000475971 KRTAP19-1Q8IUB9 90 aa3.83□□□□□ -1.8
SUN1-229ENST00000475971 KRTAP9-3Q9BYQ3 159 aa3.76□□□□□ -1.81
SUN1-229ENST00000475971 SPRR2GQ9BYE4 73 aa3.75□□□□□ -1.81
SUN1-229ENST00000475971 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
SUN1-229ENST00000475971 LCE2BO14633 110 aa3.74□□□□□ -1.81
SUN1-229ENST00000475971 MT1BP07438 61 aa3.69□□□□□ -1.82
SUN1-229ENST00000475971 KRTAP19-8Q3LI54 63 aa3.62□□□□□ -1.83
SUN1-229ENST00000475971 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
SUN1-229ENST00000475971 KRTAP9-2Q9BYQ4 174 aa3.6□□□□□ -1.83
SUN1-229ENST00000475971 KMT2DO14686 5537 aa3.59□□□□□ -1.83
SUN1-229ENST00000475971 MT1XP80297 61 aa3.57□□□□□ -1.84
SUN1-229ENST00000475971 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
SUN1-229ENST00000475971 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
SUN1-229ENST00000475971 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
SUN1-229ENST00000475971 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
SUN1-229ENST00000475971 KRTAP23-1A1A580 65 aa3.52□□□□□ -1.85
SUN1-229ENST00000475971 KRTAP4-8A0A0G2JLE6 195 aa3.51□□□□□ -1.85
SUN1-229ENST00000475971 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
SUN1-229ENST00000475971 KRTAP4-8Q9BYQ9 185 aa3.51□□□□□ -1.85
SUN1-229ENST00000475971 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
SUN1-229ENST00000475971 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
SUN1-229ENST00000475971 LCE2DQ5TA82 110 aaPredicted RBP3.43□□□□□ -1.86
SUN1-229ENST00000475971 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
SUN1-229ENST00000475971 MACF1Q9UPN3 7388 aaKnown RBP3.42□□□□□ -1.86
SUN1-229ENST00000475971 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
SUN1-229ENST00000475971 KRTAP19-6Q3LI70 58 aa3.38□□□□□ -1.87
SUN1-229ENST00000475971 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
SUN1-229ENST00000475971 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
SUN1-229ENST00000475971 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
SUN1-229ENST00000475971 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms