RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SPRR1BP22528 89 aa2.66□□□□□ -1.98
NPHP3-206ENST00000474871 PRO2289Q9P1D8 64 aa2.65□□□□□ -1.99
NPHP3-206ENST00000474871 R4GN34 69 aa2.65□□□□□ -1.99
NPHP3-206ENST00000474871 KMT2AQ03164 3969 aa2.65□□□□□ -1.99
NPHP3-206ENST00000474871 PKHD1L1Q86WI1 4243 aa2.64□□□□□ -1.99
NPHP3-206ENST00000474871 HECTD4Q9Y4D8 3996 aa2.64□□□□□ -1.99
NPHP3-206ENST00000474871 PLAC4Q8WY50 150 aa2.64□□□□□ -1.99
NPHP3-206ENST00000474871 MMP24-AS1A0A0U1RRL7 71 aa2.64□□□□□ -1.99
NPHP3-206ENST00000474871 SPRR1AP35321 89 aa2.64□□□□□ -1.99
NPHP3-206ENST00000474871 KRTAP10-1P60331 282 aa2.64□□□□□ -1.99
NPHP3-206ENST00000474871 S4R3F8 94 aa2.64□□□□□ -1.99
NPHP3-206ENST00000474871 DNAH2Q9P225 4427 aa2.63□□□□□ -1.99
NPHP3-206ENST00000474871 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
NPHP3-206ENST00000474871 KRTAP7-1Q8IUC3 87 aa2.63□□□□□ -1.99
NPHP3-206ENST00000474871 Q6ZRN7 208 aaPredicted RBP2.62□□□□□ -1.99
NPHP3-206ENST00000474871 RPS29P62273 56 aaKnown RBP2.62□□□□□ -1.99
NPHP3-206ENST00000474871 SRRM2Q9UQ35 2752 aaKnown RBP2.61□□□□□ -1.99
NPHP3-206ENST00000474871 A0A0D9SG42 100 aa2.61□□□□□ -1.99
NPHP3-206ENST00000474871 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
NPHP3-206ENST00000474871 KRTAP9-2Q9BYQ4 174 aa2.6□□□□□ -1.99
NPHP3-206ENST00000474871 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
NPHP3-206ENST00000474871 DNAH17Q9UFH2 4485 aa2.57□□□□□ -2
NPHP3-206ENST00000474871 HYDINQ4G0P3 5121 aa2.57□□□□□ -2
NPHP3-206ENST00000474871 PKD1P98161 4303 aa2.57□□□□□ -2
NPHP3-206ENST00000474871 KRTAP4-8Q9BYQ9 185 aa2.57□□□□□ -2
NPHP3-206ENST00000474871 FAT2Q9NYQ8 4349 aa2.56□□□□□ -2
NPHP3-206ENST00000474871 DNAH5Q8TE73 4624 aa2.55□□□□□ -2
NPHP3-206ENST00000474871 M0QZ58 72 aa2.53□□□□□ -2
NPHP3-206ENST00000474871 KRTAP13-1Q8IUC0 172 aa2.53□□□□□ -2
NPHP3-206ENST00000474871 H1FX-AS1Q4G0G2 97 aa2.52□□□□□ -2.01
NPHP3-206ENST00000474871 RPL37P61927 97 aaKnown RBP2.51□□□□□ -2.01
NPHP3-206ENST00000474871 VPS13BQ7Z7G8 4022 aa2.49□□□□□ -2.01
NPHP3-206ENST00000474871 SACSQ9NZJ4 4579 aa2.49□□□□□ -2.01
NPHP3-206ENST00000474871 KRTAP9-3Q9BYQ3 159 aa2.48□□□□□ -2.01
NPHP3-206ENST00000474871 RYR2Q92736 4967 aa2.48□□□□□ -2.01
NPHP3-206ENST00000474871 TGP01266 2768 aa2.47□□□□□ -2.01
NPHP3-206ENST00000474871 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
NPHP3-206ENST00000474871 PKHD1P08F94 4074 aa2.47□□□□□ -2.01
NPHP3-206ENST00000474871 A0A1B0GVY2 172 aa2.46□□□□□ -2.01
NPHP3-206ENST00000474871 LRP1BQ9NZR2 4599 aa2.44□□□□□ -2.02
NPHP3-206ENST00000474871 KMT2CQ8NEZ4 4911 aaKnown RBP2.43□□□□□ -2.02
NPHP3-206ENST00000474871 HSPG2P98160 4391 aa2.43□□□□□ -2.02
NPHP3-206ENST00000474871 DYNC1H1Q14204 4646 aaKnown RBP2.42□□□□□ -2.02
NPHP3-206ENST00000474871 APOBP04114 4563 aaKnown RBP2.41□□□□□ -2.02
NPHP3-206ENST00000474871 KRTAP13-4Q3LI77 160 aa2.41□□□□□ -2.02
NPHP3-206ENST00000474871 LCE3BQ5TA77 95 aa2.41□□□□□ -2.02
NPHP3-206ENST00000474871 KRTAP13-2Q52LG2 175 aa2.4□□□□□ -2.02
NPHP3-206ENST00000474871 RYR3Q15413 4870 aa2.4□□□□□ -2.03
NPHP3-206ENST00000474871 TNP1P09430 55 aa2.4□□□□□ -2.03
NPHP3-206ENST00000474871 KRTAP12-2P59991 146 aa2.4□□□□□ -2.03
NPHP3-206ENST00000474871 KRTAP1-4P0C5Y4 121 aa2.4□□□□□ -2.03
NPHP3-206ENST00000474871 INE1O15225 51 aa2.38□□□□□ -2.03
NPHP3-206ENST00000474871 KRTAP10-4P60372 401 aaPredicted RBP2.37□□□□□ -2.03
NPHP3-206ENST00000474871 KRTAP19-4Q3LI73 84 aa2.36□□□□□ -2.03
NPHP3-206ENST00000474871 LCE5AQ5TCM9 118 aa2.36□□□□□ -2.03
NPHP3-206ENST00000474871 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
NPHP3-206ENST00000474871 BIRC6Q9NR09 4857 aa2.34□□□□□ -2.03
NPHP3-206ENST00000474871 KRTAP10-10P60014 251 aa2.34□□□□□ -2.04
NPHP3-206ENST00000474871 FAT3Q8TDW7 4589 aa2.33□□□□□ -2.04
NPHP3-206ENST00000474871 KRTAP10-6P60371 365 aaPredicted RBP2.33□□□□□ -2.04
NPHP3-206ENST00000474871 TNXBP22105 4242 aa2.33□□□□□ -2.04
NPHP3-206ENST00000474871 FAT1Q14517 4588 aa2.32□□□□□ -2.04
NPHP3-206ENST00000474871 RYR1P21817 5038 aa2.31□□□□□ -2.04
NPHP3-206ENST00000474871 KRTAP2-2Q9BYT5 123 aa2.3□□□□□ -2.04
NPHP3-206ENST00000474871 EPPK1P58107 5090 aaKnown RBP2.3□□□□□ -2.04
NPHP3-206ENST00000474871 KRTAP4-8A0A0G2JLE6 195 aa2.29□□□□□ -2.04
NPHP3-206ENST00000474871 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
NPHP3-206ENST00000474871 LRP1Q07954 4544 aaKnown RBP2.26□□□□□ -2.05
NPHP3-206ENST00000474871 LCE1DQ5T752 114 aa2.25□□□□□ -2.05
NPHP3-206ENST00000474871 KRTAP12-1P59990 96 aa2.24□□□□□ -2.05
NPHP3-206ENST00000474871 KIAA1109Q2LD37 5005 aa2.24□□□□□ -2.05
NPHP3-206ENST00000474871 MT1HL1P0DM35 61 aa2.22□□□□□ -2.05
NPHP3-206ENST00000474871 KRTAP4-5Q9BYR2 181 aa2.19□□□□□ -2.06
NPHP3-206ENST00000474871 ABCA13Q86UQ4 5058 aa2.19□□□□□ -2.06
NPHP3-206ENST00000474871 HERC2O95714 4834 aa2.19□□□□□ -2.06
NPHP3-206ENST00000474871 KRTAP4-11Q9BYQ6 195 aa2.17□□□□□ -2.06
NPHP3-206ENST00000474871 KRTAP4-9Q9BYQ8 210 aa2.16□□□□□ -2.06
NPHP3-206ENST00000474871 KRTAP4-7Q9BYR0 210 aa2.16□□□□□ -2.06
NPHP3-206ENST00000474871 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.07
NPHP3-206ENST00000474871 LPAP08519 4548 aa2.13□□□□□ -2.07
NPHP3-206ENST00000474871 MUC17Q685J3 4493 aa2.1□□□□□ -2.07
NPHP3-206ENST00000474871 LCE1AQ5T7P2 110 aa2.1□□□□□ -2.07
NPHP3-206ENST00000474871 PCLOQ9Y6V0 5065 aa2.1□□□□□ -2.07
NPHP3-206ENST00000474871 LRP2P98164 4655 aa2.08□□□□□ -2.08
NPHP3-206ENST00000474871 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
NPHP3-206ENST00000474871 HMCN2Q8NDA2 5059 aa2.04□□□□□ -2.08
NPHP3-206ENST00000474871 KRTAP4-1Q9BYQ7 146 aa2.03□□□□□ -2.08
NPHP3-206ENST00000474871 HERC1Q15751 4861 aa2.02□□□□□ -2.09
NPHP3-206ENST00000474871 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
NPHP3-206ENST00000474871 KRTAP19-2Q3LHN2 52 aa1.99□□□□□ -2.09
NPHP3-206ENST00000474871 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
NPHP3-206ENST00000474871 KRTAP9-8Q9BYQ0 159 aa1.99□□□□□ -2.09
NPHP3-206ENST00000474871 MUC2Q02817 5179 aa1.99□□□□□ -2.09
NPHP3-206ENST00000474871 LCE1EQ5T753 118 aa1.97□□□□□ -2.09
NPHP3-206ENST00000474871 KRTAP10-12P60413 245 aa1.95□□□□□ -2.1
NPHP3-206ENST00000474871 UBR4Q5T4S7 5183 aa1.94□□□□□ -2.1
NPHP3-206ENST00000474871 RNF213Q63HN8 5207 aa1.93□□□□□ -2.1
NPHP3-206ENST00000474871 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
NPHP3-206ENST00000474871 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
NPHP3-206ENST00000474871 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms