RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 Q96NJ1 140 aa2.43□□□□□ -2.02
GAPVD1-216ENST00000474637 MMP24-AS1A0A0U1RRL7 71 aa2.43□□□□□ -2.02
GAPVD1-216ENST00000474637 A0A087X002 238 aa2.42□□□□□ -2.02
GAPVD1-216ENST00000474637 KRTAP13-2Q52LG2 175 aa2.42□□□□□ -2.02
GAPVD1-216ENST00000474637 IGLV7-46A0A075B6I9 117 aa2.42□□□□□ -2.02
GAPVD1-216ENST00000474637 IGHV6-1A0A0B4J1U7 121 aa2.42□□□□□ -2.02
GAPVD1-216ENST00000474637 LINC00313P59037 77 aa2.42□□□□□ -2.02
GAPVD1-216ENST00000474637 ADM2Q7Z4H4 148 aa2.42□□□□□ -2.02
GAPVD1-216ENST00000474637 SSBP3-AS1Q7Z2R9 100 aa2.41□□□□□ -2.02
GAPVD1-216ENST00000474637 LINC00304Q8N9R0 145 aa2.41□□□□□ -2.02
GAPVD1-216ENST00000474637 H3BPC8 53 aa2.41□□□□□ -2.02
GAPVD1-216ENST00000474637 C8orf17Q9NRJ1 99 aa2.41□□□□□ -2.02
GAPVD1-216ENST00000474637 HERC1Q15751 4861 aa2.41□□□□□ -2.02
GAPVD1-216ENST00000474637 NOTCH2NLQ7Z3S9 236 aa2.4□□□□□ -2.02
GAPVD1-216ENST00000474637 LINC01558Q9Y6Z2 57 aa2.4□□□□□ -2.02
GAPVD1-216ENST00000474637 ASB16-AS1Q495Z4 193 aa2.4□□□□□ -2.03
GAPVD1-216ENST00000474637 A0A1B0GVX0 72 aa2.39□□□□□ -2.03
GAPVD1-216ENST00000474637 TP53AIP1Q9HCN2 124 aa2.39□□□□□ -2.03
GAPVD1-216ENST00000474637 SPINK1P00995 79 aa2.39□□□□□ -2.03
GAPVD1-216ENST00000474637 HRES1P13985 223 aa2.39□□□□□ -2.03
GAPVD1-216ENST00000474637 RPS29P62273 56 aaKnown RBP2.39□□□□□ -2.03
GAPVD1-216ENST00000474637 HMCN2Q8NDA2 5059 aa2.38□□□□□ -2.03
GAPVD1-216ENST00000474637 MRPL34Q9BQ48 92 aaKnown RBP2.38□□□□□ -2.03
GAPVD1-216ENST00000474637 LINC01554Q52M75 96 aa2.37□□□□□ -2.03
GAPVD1-216ENST00000474637 Q5W150 140 aa2.36□□□□□ -2.03
GAPVD1-216ENST00000474637 RETNLBQ9BQ08 111 aa2.33□□□□□ -2.04
GAPVD1-216ENST00000474637 TPRXLQ17RH7 258 aa2.33□□□□□ -2.04
GAPVD1-216ENST00000474637 KRTAP13-3Q3SY46 172 aa2.33□□□□□ -2.04
GAPVD1-216ENST00000474637 CSAG1Q6PB30 78 aa2.33□□□□□ -2.04
GAPVD1-216ENST00000474637 A0A1B0GU69 56 aa2.32□□□□□ -2.04
GAPVD1-216ENST00000474637 ACYP2P14621 99 aa2.31□□□□□ -2.04
GAPVD1-216ENST00000474637 MIR22HGQ0VDD5 57 aa2.31□□□□□ -2.04
GAPVD1-216ENST00000474637 UQCR11O14957 56 aa2.29□□□□□ -2.04
GAPVD1-216ENST00000474637 SPATA8Q6RVD6 105 aa2.29□□□□□ -2.04
GAPVD1-216ENST00000474637 MUC17Q685J3 4493 aa2.29□□□□□ -2.04
GAPVD1-216ENST00000474637 KRTAP16-1A8MUX0 517 aa2.29□□□□□ -2.04
GAPVD1-216ENST00000474637 LRP2P98164 4655 aa2.28□□□□□ -2.04
GAPVD1-216ENST00000474637 IGKV2-30P06310 120 aa2.28□□□□□ -2.04
GAPVD1-216ENST00000474637 KRTAP19-4Q3LI73 84 aa2.28□□□□□ -2.04
GAPVD1-216ENST00000474637 IGKV2D-30A0A075B6S6 120 aa2.27□□□□□ -2.05
GAPVD1-216ENST00000474637 RNF213Q63HN8 5207 aa2.27□□□□□ -2.05
GAPVD1-216ENST00000474637 LPAP08519 4548 aa2.27□□□□□ -2.05
GAPVD1-216ENST00000474637 UBR4Q5T4S7 5183 aa2.27□□□□□ -2.05
GAPVD1-216ENST00000474637 SEC61BP60468 96 aaKnown RBP2.27□□□□□ -2.05
GAPVD1-216ENST00000474637 DMAC1Q96GE9 116 aa2.27□□□□□ -2.05
GAPVD1-216ENST00000474637 KRTAP3-1Q9BYR8 98 aa2.26□□□□□ -2.05
GAPVD1-216ENST00000474637 C9orf92A6NGG3 77 aa2.25□□□□□ -2.05
GAPVD1-216ENST00000474637 LCE4AQ5TA78 99 aa2.25□□□□□ -2.05
GAPVD1-216ENST00000474637 KRTAP23-1A1A580 65 aa2.23□□□□□ -2.05
GAPVD1-216ENST00000474637 CRIPTQ9P021 101 aa2.23□□□□□ -2.05
GAPVD1-216ENST00000474637 ROMO1P60602 79 aa2.23□□□□□ -2.05
GAPVD1-216ENST00000474637 RPL37P61927 97 aaKnown RBP2.23□□□□□ -2.05
GAPVD1-216ENST00000474637 KRTAP9-7A8MTY7 169 aa2.21□□□□□ -2.06
GAPVD1-216ENST00000474637 KRTAP25-1Q3LHN0 102 aa2.21□□□□□ -2.06
GAPVD1-216ENST00000474637 C20orf166-AS1Q96NR2 134 aa2.21□□□□□ -2.06
GAPVD1-216ENST00000474637 A8MUU9 505 aa2.2□□□□□ -2.06
GAPVD1-216ENST00000474637 H0YAA0 97 aa2.19□□□□□ -2.06
GAPVD1-216ENST00000474637 P0C880 135 aa2.18□□□□□ -2.06
GAPVD1-216ENST00000474637 LCE5AQ5TCM9 118 aa2.18□□□□□ -2.06
GAPVD1-216ENST00000474637 KRTAP4-1Q9BYQ7 146 aa2.18□□□□□ -2.06
GAPVD1-216ENST00000474637 A0A1B0GU33 70 aa2.15□□□□□ -2.07
GAPVD1-216ENST00000474637 MUC2Q02817 5179 aa2.15□□□□□ -2.07
GAPVD1-216ENST00000474637 SPINT4Q6UDR6 99 aa2.14□□□□□ -2.07
GAPVD1-216ENST00000474637 FAT4Q6V0I7 4981 aa2.14□□□□□ -2.07
GAPVD1-216ENST00000474637 COX6B2Q6YFQ2 88 aa2.13□□□□□ -2.07
GAPVD1-216ENST00000474637 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
GAPVD1-216ENST00000474637 K7ERS5 55 aa2.12□□□□□ -2.07
GAPVD1-216ENST00000474637 KRTAP19-2Q3LHN2 52 aa2.12□□□□□ -2.07
GAPVD1-216ENST00000474637 H1FX-AS1Q4G0G2 97 aa2.12□□□□□ -2.07
GAPVD1-216ENST00000474637 KRTAP9-3Q9BYQ3 159 aa2.11□□□□□ -2.07
GAPVD1-216ENST00000474637 FLGP20930 4061 aaPredicted RBP2.1□□□□□ -2.07
GAPVD1-216ENST00000474637 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
GAPVD1-216ENST00000474637 A0A0D9SG42 100 aa2.09□□□□□ -2.07
GAPVD1-216ENST00000474637 MT1HP80294 61 aa2.09□□□□□ -2.07
GAPVD1-216ENST00000474637 M0R2T5 61 aa2.08□□□□□ -2.08
GAPVD1-216ENST00000474637 KRTAP10-6P60371 365 aaPredicted RBP2.06□□□□□ -2.08
GAPVD1-216ENST00000474637 KRTAP15-1Q3LI76 137 aa2.05□□□□□ -2.08
GAPVD1-216ENST00000474637 S4R3F8 94 aa2.05□□□□□ -2.08
GAPVD1-216ENST00000474637 A0A0A0MQY5 61 aa2.03□□□□□ -2.08
GAPVD1-216ENST00000474637 KRTAP13-4Q3LI77 160 aa2.03□□□□□ -2.08
GAPVD1-216ENST00000474637 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
GAPVD1-216ENST00000474637 KRTAP12-2P59991 146 aa1.99□□□□□ -2.09
GAPVD1-216ENST00000474637 MT2AP02795 61 aa1.97□□□□□ -2.09
GAPVD1-216ENST00000474637 KRTAP10-10P60014 251 aa1.96□□□□□ -2.09
GAPVD1-216ENST00000474637 LUZP6Q538Z0 58 aa1.95□□□□□ -2.1
GAPVD1-216ENST00000474637 MT1FP04733 61 aa1.95□□□□□ -2.1
GAPVD1-216ENST00000474637 KRTAP12-1P59990 96 aa1.94□□□□□ -2.1
GAPVD1-216ENST00000474637 M0QZ58 72 aa1.94□□□□□ -2.1
GAPVD1-216ENST00000474637 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
GAPVD1-216ENST00000474637 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
GAPVD1-216ENST00000474637 R4GN34 69 aa1.91□□□□□ -2.1
GAPVD1-216ENST00000474637 PLAC4Q8WY50 150 aa1.9□□□□□ -2.1
GAPVD1-216ENST00000474637 USH2AO75445 5202 aa1.9□□□□□ -2.11
GAPVD1-216ENST00000474637 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
GAPVD1-216ENST00000474637 SPRR2GQ9BYE4 73 aa1.86□□□□□ -2.11
GAPVD1-216ENST00000474637 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
GAPVD1-216ENST00000474637 SSPOA2VEC9 5147 aa1.85□□□□□ -2.11
GAPVD1-216ENST00000474637 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.12
GAPVD1-216ENST00000474637 KRTAP19-6Q3LI70 58 aa1.84□□□□□ -2.12
GAPVD1-216ENST00000474637 CAMK2N1Q7Z7J9 78 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms