RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 LCA10Q71F78 164 aa13.6□□□□□ -0.23
HOXB3-207ENST00000472863 S4R3F8 94 aa13.59□□□□□ -0.23
HOXB3-207ENST00000472863 KRTAP3-3Q9BYR6 98 aa13.55□□□□□ -0.24
HOXB3-207ENST00000472863 SPTSSBQ8NFR3 76 aa13.45□□□□□ -0.26
HOXB3-207ENST00000472863 LCE2CQ5TA81 110 aa13.43□□□□□ -0.26
HOXB3-207ENST00000472863 Q1T7F1 81 aa13.38□□□□□ -0.27
HOXB3-207ENST00000472863 FAT4Q6V0I7 4981 aa13.35□□□□□ -0.27
HOXB3-207ENST00000472863 FLGP20930 4061 aaPredicted RBP13.35□□□□□ -0.27
HOXB3-207ENST00000472863 LINC01558Q9Y6Z2 57 aa13.32□□□□□ -0.28
HOXB3-207ENST00000472863 CSAG1Q6PB30 78 aa13.3□□□□□ -0.28
HOXB3-207ENST00000472863 V9GYY9 64 aa13.29□□□□□ -0.28
HOXB3-207ENST00000472863 PSPHP1O15172 72 aa13.23□□□□□ -0.29
HOXB3-207ENST00000472863 PRR15LQ9BU68 103 aa13.2□□□□□ -0.3
HOXB3-207ENST00000472863 A0A1B0GU69 56 aa13.17□□□□□ -0.3
HOXB3-207ENST00000472863 MT1HP80294 61 aa13.15□□□□□ -0.3
HOXB3-207ENST00000472863 SEC61GP60059 68 aa13.09□□□□□ -0.31
HOXB3-207ENST00000472863 Q5VV11 94 aa13.07□□□□□ -0.32
HOXB3-207ENST00000472863 KRTAP3-2Q9BYR7 98 aa13.03□□□□□ -0.32
HOXB3-207ENST00000472863 ADM2Q7Z4H4 148 aa13.01□□□□□ -0.33
HOXB3-207ENST00000472863 M0R2T5 61 aa13.01□□□□□ -0.33
HOXB3-207ENST00000472863 KRTAP10-6P60371 365 aaPredicted RBP13□□□□□ -0.33
HOXB3-207ENST00000472863 P0C880 135 aa12.95□□□□□ -0.34
HOXB3-207ENST00000472863 H0YAA0 97 aa12.94□□□□□ -0.34
HOXB3-207ENST00000472863 A0A1B0GU33 70 aa12.82□□□□□ -0.36
HOXB3-207ENST00000472863 A6NED7 52 aa12.77□□□□□ -0.37
HOXB3-207ENST00000472863 UQCR11O14957 56 aa12.72□□□□□ -0.37
HOXB3-207ENST00000472863 LORP23490 312 aaPredicted RBP12.71□□□□□ -0.37
HOXB3-207ENST00000472863 LCE2AQ5TA79 106 aaPredicted RBP12.7□□□□□ -0.38
HOXB3-207ENST00000472863 SPATA8Q6RVD6 105 aa12.67□□□□□ -0.38
HOXB3-207ENST00000472863 KRTAP13-4Q3LI77 160 aa12.66□□□□□ -0.38
HOXB3-207ENST00000472863 KRTAP9-8Q9BYQ0 159 aa12.66□□□□□ -0.38
HOXB3-207ENST00000472863 MT2AP02795 61 aa12.59□□□□□ -0.39
HOXB3-207ENST00000472863 MIR22HGQ0VDD5 57 aa12.59□□□□□ -0.39
HOXB3-207ENST00000472863 A8MU10 97 aa12.58□□□□□ -0.4
HOXB3-207ENST00000472863 BRK1Q8WUW1 75 aa12.56□□□□□ -0.4
HOXB3-207ENST00000472863 MT1FP04733 61 aa12.54□□□□□ -0.4
HOXB3-207ENST00000472863 R4GN34 69 aa12.52□□□□□ -0.4
HOXB3-207ENST00000472863 M0QZ58 72 aa12.52□□□□□ -0.41
HOXB3-207ENST00000472863 KRTAP10-10P60014 251 aa12.5□□□□□ -0.41
HOXB3-207ENST00000472863 CDC42SE1Q9NRR8 79 aa12.5□□□□□ -0.41
HOXB3-207ENST00000472863 A0A0D9SG42 100 aa12.41□□□□□ -0.42
HOXB3-207ENST00000472863 CRIPTQ9P021 101 aa12.41□□□□□ -0.42
HOXB3-207ENST00000472863 LINC01554Q52M75 96 aa12.35□□□□□ -0.43
HOXB3-207ENST00000472863 KRTAP19-1Q8IUB9 90 aa12.27□□□□□ -0.44
HOXB3-207ENST00000472863 SPRR2GQ9BYE4 73 aa12.25□□□□□ -0.45
HOXB3-207ENST00000472863 KRTAP9-3Q9BYQ3 159 aa12.2□□□□□ -0.46
HOXB3-207ENST00000472863 PRO0628Q9UI54 55 aa12.16□□□□□ -0.46
HOXB3-207ENST00000472863 KRTAP12-1P59990 96 aa12.13□□□□□ -0.47
HOXB3-207ENST00000472863 KRTAP12-2P59991 146 aa12.11□□□□□ -0.47
HOXB3-207ENST00000472863 SPINT4Q6UDR6 99 aa12.11□□□□□ -0.47
HOXB3-207ENST00000472863 A6NN06 94 aa11.99□□□□□ -0.49
HOXB3-207ENST00000472863 K7ERS5 55 aa11.98□□□□□ -0.49
HOXB3-207ENST00000472863 KRTAP19-8Q3LI54 63 aa11.94□□□□□ -0.5
HOXB3-207ENST00000472863 LCE2BO14633 110 aa11.9□□□□□ -0.5
HOXB3-207ENST00000472863 PMAIP1Q13794 54 aa11.86□□□□□ -0.51
HOXB3-207ENST00000472863 MT1BP07438 61 aa11.84□□□□□ -0.51
HOXB3-207ENST00000472863 PLAC4Q8WY50 150 aa11.81□□□□□ -0.52
HOXB3-207ENST00000472863 CAMK2N1Q7Z7J9 78 aa11.72□□□□□ -0.53
HOXB3-207ENST00000472863 USH2AO75445 5202 aa11.65□□□□□ -0.54
HOXB3-207ENST00000472863 LCE2DQ5TA82 110 aaPredicted RBP11.53□□□□□ -0.56
HOXB3-207ENST00000472863 ROMO1P60602 79 aa11.52□□□□□ -0.57
HOXB3-207ENST00000472863 C10orf95Q9H7T3 257 aa11.51□□□□□ -0.57
HOXB3-207ENST00000472863 MT1XP80297 61 aa11.43□□□□□ -0.58
HOXB3-207ENST00000472863 KRTAP10-5P60370 271 aa11.41□□□□□ -0.58
HOXB3-207ENST00000472863 FSIP2Q5CZC0 6907 aa11.39□□□□□ -0.59
HOXB3-207ENST00000472863 SSPOA2VEC9 5147 aa11.3□□□□□ -0.6
HOXB3-207ENST00000472863 KTN1-AS1Q86SY8 53 aa11.27□□□□□ -0.6
HOXB3-207ENST00000472863 PRO2289Q9P1D8 64 aa11.23□□□□□ -0.61
HOXB3-207ENST00000472863 KRTAP9-2Q9BYQ4 174 aa11.21□□□□□ -0.62
HOXB3-207ENST00000472863 PRAC1Q96KF2 57 aa11.18□□□□□ -0.62
HOXB3-207ENST00000472863 KRTAP19-6Q3LI70 58 aa11.13□□□□□ -0.63
HOXB3-207ENST00000472863 TNP1P09430 55 aa11.11□□□□□ -0.63
HOXB3-207ENST00000472863 KRTAP25-1Q3LHN0 102 aa11.09□□□□□ -0.63
HOXB3-207ENST00000472863 KRTAP10-7P60409 375 aaPredicted RBP10.99□□□□□ -0.65
HOXB3-207ENST00000472863 FCGBPQ9Y6R7 5405 aaPredicted RBP10.84□□□□□ -0.67
HOXB3-207ENST00000472863 KRTAP10-12P60413 245 aa10.8□□□□□ -0.68
HOXB3-207ENST00000472863 CRCT1Q9UGL9 99 aa10.78□□□□□ -0.68
HOXB3-207ENST00000472863 SVIPQ8NHG7 77 aa10.74□□□□□ -0.69
HOXB3-207ENST00000472863 LCE3AQ5TA76 89 aa10.72□□□□□ -0.69
HOXB3-207ENST00000472863 KMT2DO14686 5537 aa10.7□□□□□ -0.7
HOXB3-207ENST00000472863 KRTAP23-1A1A580 65 aa10.67□□□□□ -0.7
HOXB3-207ENST00000472863 PP632Q6XCG6 107 aa10.66□□□□□ -0.7
HOXB3-207ENST00000472863 KRTAP4-8A0A0G2JLE6 195 aa10.63□□□□□ -0.71
HOXB3-207ENST00000472863 KRTAP4-8Q9BYQ9 185 aa10.63□□□□□ -0.71
HOXB3-207ENST00000472863 KRTAP8-1Q8IUC2 63 aa10.45□□□□□ -0.74
HOXB3-207ENST00000472863 MACF1Q9UPN3 7388 aaKnown RBP10.35□□□□□ -0.75
HOXB3-207ENST00000472863 KRTAP9-6A0A140TA67 174 aa10.34□□□□□ -0.75
HOXB3-207ENST00000472863 KRTAP19-5Q3LI72 72 aa10.31□□□□□ -0.76
HOXB3-207ENST00000472863 KRTAP12-3P60328 96 aa10.27□□□□□ -0.76
HOXB3-207ENST00000472863 KRTAP19-7Q3SYF9 63 aa10.2□□□□□ -0.78
HOXB3-207ENST00000472863 SYNE2Q8WXH0 6885 aaKnown RBP10.1□□□□□ -0.79
HOXB3-207ENST00000472863 KRTAP15-1Q3LI76 137 aa10.03□□□□□ -0.8
HOXB3-207ENST00000472863 MT1EP04732 61 aa10.01□□□□□ -0.81
HOXB3-207ENST00000472863 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.98□□□□□ -0.81
HOXB3-207ENST00000472863 SPRR2FQ96RM1 72 aa9.92□□□□□ -0.82
HOXB3-207ENST00000472863 MUC12Q9UKN1 5478 aa9.9□□□□□ -0.82
HOXB3-207ENST00000472863 KRTAP5-9P26371 169 aa9.8□□□□□ -0.84
HOXB3-207ENST00000472863 MT1LQ93083 61 aa9.8□□□□□ -0.84
HOXB3-207ENST00000472863 KRTAP6-3Q3LI67 103 aa9.68□□□□□ -0.86
HOXB3-207ENST00000472863 KRTAP19-3Q7Z4W3 81 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms