RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 MACF1Q9UPN3 7388 aaKnown RBP4.1□□□□□ -1.75
USF1-204ENST00000472217 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
USF1-204ENST00000472217 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
USF1-204ENST00000472217 MT1BP07438 61 aa4.07□□□□□ -1.76
USF1-204ENST00000472217 PCP4P48539 62 aa4.07□□□□□ -1.76
USF1-204ENST00000472217 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
USF1-204ENST00000472217 CYP4F30PQ9H0H9 118 aa4.07□□□□□ -1.76
USF1-204ENST00000472217 TRAV22A0A0B4J277 110 aa4.06□□□□□ -1.76
USF1-204ENST00000472217 SPRR2GQ9BYE4 73 aa4.06□□□□□ -1.76
USF1-204ENST00000472217 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
USF1-204ENST00000472217 Q5VV11 94 aa4.05□□□□□ -1.76
USF1-204ENST00000472217 ACYP1P07311 99 aa4.04□□□□□ -1.76
USF1-204ENST00000472217 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
USF1-204ENST00000472217 A0A087WVE0 104 aa4.03□□□□□ -1.76
USF1-204ENST00000472217 LOC101927531A0A1B0GV80 90 aa4.03□□□□□ -1.76
USF1-204ENST00000472217 FAM240AA0A1B0GVK7 77 aa4.03□□□□□ -1.76
USF1-204ENST00000472217 KLKP1Q107X0 134 aa4.03□□□□□ -1.76
USF1-204ENST00000472217 A6NN06 94 aa4.02□□□□□ -1.77
USF1-204ENST00000472217 ATP5EP2Q5VTU8 51 aa4.02□□□□□ -1.77
USF1-204ENST00000472217 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
USF1-204ENST00000472217 HIST1H4AP62805 103 aaKnown RBP4□□□□□ -1.77
USF1-204ENST00000472217 UQCRQO14949 82 aa3.99□□□□□ -1.77
USF1-204ENST00000472217 A0A1B0GV90 55 aa3.98□□□□□ -1.77
USF1-204ENST00000472217 H0Y9P7 68 aa3.98□□□□□ -1.77
USF1-204ENST00000472217 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
USF1-204ENST00000472217 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
USF1-204ENST00000472217 ATOX1O00244 68 aa3.97□□□□□ -1.77
USF1-204ENST00000472217 CRIPTQ9P021 101 aa3.96□□□□□ -1.78
USF1-204ENST00000472217 IMUPQ9GZP8 106 aa3.95□□□□□ -1.78
USF1-204ENST00000472217 NDUFC1O43677 76 aa3.94□□□□□ -1.78
USF1-204ENST00000472217 H0YAA0 97 aa3.93□□□□□ -1.78
USF1-204ENST00000472217 J3QR89 54 aa3.93□□□□□ -1.78
USF1-204ENST00000472217 LINC00643Q86TS7 51 aa3.93□□□□□ -1.78
USF1-204ENST00000472217 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
USF1-204ENST00000472217 LINC00208Q96KT6 92 aa3.92□□□□□ -1.78
USF1-204ENST00000472217 A8MUN3 132 aa3.91□□□□□ -1.78
USF1-204ENST00000472217 ADM2Q7Z4H4 148 aa3.89□□□□□ -1.79
USF1-204ENST00000472217 OCR1Q9BZK8 76 aa3.89□□□□□ -1.79
USF1-204ENST00000472217 MP68P56378 58 aa3.87□□□□□ -1.79
USF1-204ENST00000472217 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
USF1-204ENST00000472217 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
USF1-204ENST00000472217 H3BPC8 53 aa3.81□□□□□ -1.8
USF1-204ENST00000472217 K7ERU9 68 aa3.81□□□□□ -1.8
USF1-204ENST00000472217 DMAC1Q96GE9 116 aa3.81□□□□□ -1.8
USF1-204ENST00000472217 P0C880 135 aa3.8□□□□□ -1.8
USF1-204ENST00000472217 MT1XP80297 61 aa3.8□□□□□ -1.8
USF1-204ENST00000472217 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
USF1-204ENST00000472217 R4GN34 69 aa3.79□□□□□ -1.8
USF1-204ENST00000472217 NEBP20929 6669 aa3.79□□□□□ -1.8
USF1-204ENST00000472217 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
USF1-204ENST00000472217 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
USF1-204ENST00000472217 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
USF1-204ENST00000472217 KMT2DO14686 5537 aa3.77□□□□□ -1.81
USF1-204ENST00000472217 SCGB1A1P11684 91 aa3.77□□□□□ -1.81
USF1-204ENST00000472217 C20orf197Q8N268 126 aa3.77□□□□□ -1.81
USF1-204ENST00000472217 M0QZ58 72 aa3.76□□□□□ -1.81
USF1-204ENST00000472217 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
USF1-204ENST00000472217 SMIM20Q8N5G0 67 aa3.72□□□□□ -1.81
USF1-204ENST00000472217 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
USF1-204ENST00000472217 TRAV7A0A075B6U4 112 aa3.71□□□□□ -1.82
USF1-204ENST00000472217 MT-ATP8P03928 68 aa3.71□□□□□ -1.82
USF1-204ENST00000472217 KRTAP12-2P59991 146 aa3.71□□□□□ -1.82
USF1-204ENST00000472217 LINC01554Q52M75 96 aa3.71□□□□□ -1.82
USF1-204ENST00000472217 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
USF1-204ENST00000472217 SPRR2EP22531 72 aa3.69□□□□□ -1.82
USF1-204ENST00000472217 SPRR2BP35325 72 aa3.69□□□□□ -1.82
USF1-204ENST00000472217 SPRR2AP35326 72 aa3.69□□□□□ -1.82
USF1-204ENST00000472217 ACYP2P14621 99 aa3.68□□□□□ -1.82
USF1-204ENST00000472217 KRTAP2-3P0C7H8 128 aa3.66□□□□□ -1.82
USF1-204ENST00000472217 SEC61GP60059 68 aa3.66□□□□□ -1.82
USF1-204ENST00000472217 KRTAP2-4Q9BYR9 128 aa3.66□□□□□ -1.82
USF1-204ENST00000472217 SPTSSBQ8NFR3 76 aa3.65□□□□□ -1.83
USF1-204ENST00000472217 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
USF1-204ENST00000472217 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
USF1-204ENST00000472217 CHKB-CPT1BH3BT56 60 aa3.62□□□□□ -1.83
USF1-204ENST00000472217 SNURFQ9Y675 71 aa3.61□□□□□ -1.83
USF1-204ENST00000472217 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
USF1-204ENST00000472217 SERP2Q8N6R1 65 aa3.59□□□□□ -1.83
USF1-204ENST00000472217 SPRR2DP22532 72 aa3.56□□□□□ -1.84
USF1-204ENST00000472217 SPANXA2-OT1Q8N9U9 137 aa3.56□□□□□ -1.84
USF1-204ENST00000472217 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
USF1-204ENST00000472217 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
USF1-204ENST00000472217 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
USF1-204ENST00000472217 V9GYY9 64 aa3.51□□□□□ -1.85
USF1-204ENST00000472217 COX7CP15954 63 aa3.5□□□□□ -1.85
USF1-204ENST00000472217 CAMK2N1Q7Z7J9 78 aa3.47□□□□□ -1.85
USF1-204ENST00000472217 COA5Q86WW8 74 aa3.47□□□□□ -1.85
USF1-204ENST00000472217 ANAPC13Q9BS18 74 aa3.43□□□□□ -1.86
USF1-204ENST00000472217 A0A0D9SG42 100 aa3.42□□□□□ -1.86
USF1-204ENST00000472217 H7BZZ5 65 aa3.41□□□□□ -1.86
USF1-204ENST00000472217 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.87
USF1-204ENST00000472217 SPATA8Q6RVD6 105 aa3.4□□□□□ -1.87
USF1-204ENST00000472217 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
USF1-204ENST00000472217 SERP1Q9Y6X1 66 aa3.4□□□□□ -1.87
USF1-204ENST00000472217 KRTAP5-3Q6L8H2 238 aa3.38□□□□□ -1.87
USF1-204ENST00000472217 A0A1B0GU33 70 aa3.37□□□□□ -1.87
USF1-204ENST00000472217 MT1EP04732 61 aa3.37□□□□□ -1.87
USF1-204ENST00000472217 CYSTM1Q9H1C7 97 aa3.37□□□□□ -1.87
USF1-204ENST00000472217 SPINT4Q6UDR6 99 aa3.36□□□□□ -1.87
USF1-204ENST00000472217 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms