RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 C5orf47Q569G3 176 aa6.49□□□□□ -1.37
COMMD3-208ENST00000470045 S4R3F8 94 aa6.49□□□□□ -1.37
COMMD3-208ENST00000470045 ATP5EP2Q5VTU8 51 aa6.46□□□□□ -1.38
COMMD3-208ENST00000470045 LCA10Q71F78 164 aa6.46□□□□□ -1.38
COMMD3-208ENST00000470045 CYP4F30PQ9H0H9 118 aa6.46□□□□□ -1.38
COMMD3-208ENST00000470045 TRAV22A0A0B4J277 110 aa6.45□□□□□ -1.38
COMMD3-208ENST00000470045 CSAG1Q6PB30 78 aa6.43□□□□□ -1.38
COMMD3-208ENST00000470045 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
COMMD3-208ENST00000470045 LOC101927531A0A1B0GV80 90 aa6.41□□□□□ -1.38
COMMD3-208ENST00000470045 FAM236AA0A1B0GUQ0 79 aa6.39□□□□□ -1.39
COMMD3-208ENST00000470045 FAM236BA0A1B0GV22 79 aa6.39□□□□□ -1.39
COMMD3-208ENST00000470045 HIST1H4AP62805 103 aaKnown RBP6.38□□□□□ -1.39
COMMD3-208ENST00000470045 UQCRQO14949 82 aa6.37□□□□□ -1.39
COMMD3-208ENST00000470045 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
COMMD3-208ENST00000470045 A0A087WVE0 104 aa6.34□□□□□ -1.39
COMMD3-208ENST00000470045 LINC00643Q86TS7 51 aa6.34□□□□□ -1.39
COMMD3-208ENST00000470045 H0Y9P7 68 aa6.33□□□□□ -1.4
COMMD3-208ENST00000470045 ATOX1O00244 68 aa6.33□□□□□ -1.4
COMMD3-208ENST00000470045 MT1BP07438 61 aa6.33□□□□□ -1.4
COMMD3-208ENST00000470045 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
COMMD3-208ENST00000470045 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
COMMD3-208ENST00000470045 KLKP1Q107X0 134 aa6.32□□□□□ -1.4
COMMD3-208ENST00000470045 A0A1B0GV90 55 aa6.29□□□□□ -1.4
COMMD3-208ENST00000470045 Q5VV11 94 aa6.28□□□□□ -1.4
COMMD3-208ENST00000470045 OCR1Q9BZK8 76 aa6.25□□□□□ -1.41
COMMD3-208ENST00000470045 A8MUN3 132 aa6.23□□□□□ -1.41
COMMD3-208ENST00000470045 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
COMMD3-208ENST00000470045 H0YAA0 97 aa6.22□□□□□ -1.41
COMMD3-208ENST00000470045 KRTAP6-3Q3LI67 103 aa6.22□□□□□ -1.41
COMMD3-208ENST00000470045 LINC00208Q96KT6 92 aa6.22□□□□□ -1.41
COMMD3-208ENST00000470045 IMUPQ9GZP8 106 aa6.22□□□□□ -1.41
COMMD3-208ENST00000470045 A6NN06 94 aa6.21□□□□□ -1.42
COMMD3-208ENST00000470045 NDUFC1O43677 76 aa6.21□□□□□ -1.42
COMMD3-208ENST00000470045 MP68P56378 58 aa6.18□□□□□ -1.42
COMMD3-208ENST00000470045 KRTAP10-5P60370 271 aa6.18□□□□□ -1.42
COMMD3-208ENST00000470045 J3QR89 54 aa6.15□□□□□ -1.42
COMMD3-208ENST00000470045 H3BPC8 53 aa6.13□□□□□ -1.43
COMMD3-208ENST00000470045 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.43
COMMD3-208ENST00000470045 DMAC1Q96GE9 116 aa6.06□□□□□ -1.44
COMMD3-208ENST00000470045 SCGB1A1P11684 91 aa6.04□□□□□ -1.44
COMMD3-208ENST00000470045 P0C880 135 aa5.98□□□□□ -1.45
COMMD3-208ENST00000470045 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.97□□□□□ -1.45
COMMD3-208ENST00000470045 NEBP20929 6669 aa5.97□□□□□ -1.45
COMMD3-208ENST00000470045 KRTAP5-9P26371 169 aa5.96□□□□□ -1.46
COMMD3-208ENST00000470045 C20orf197Q8N268 126 aa5.96□□□□□ -1.46
COMMD3-208ENST00000470045 MT-ATP8P03928 68 aa5.95□□□□□ -1.46
COMMD3-208ENST00000470045 R4GN34 69 aa5.94□□□□□ -1.46
COMMD3-208ENST00000470045 TRAV7A0A075B6U4 112 aa5.93□□□□□ -1.46
COMMD3-208ENST00000470045 MT1XP80297 61 aa5.93□□□□□ -1.46
COMMD3-208ENST00000470045 K7ERU9 68 aa5.92□□□□□ -1.46
COMMD3-208ENST00000470045 SMIM20Q8N5G0 67 aa5.92□□□□□ -1.46
COMMD3-208ENST00000470045 MUC12Q9UKN1 5478 aa5.91□□□□□ -1.46
COMMD3-208ENST00000470045 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
COMMD3-208ENST00000470045 M0QZ58 72 aa5.89□□□□□ -1.47
COMMD3-208ENST00000470045 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
COMMD3-208ENST00000470045 ACYP2P14621 99 aa5.88□□□□□ -1.47
COMMD3-208ENST00000470045 KMT2DO14686 5537 aa5.85□□□□□ -1.47
COMMD3-208ENST00000470045 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
COMMD3-208ENST00000470045 SPTSSBQ8NFR3 76 aa5.8□□□□□ -1.48
COMMD3-208ENST00000470045 LINC01554Q52M75 96 aa5.78□□□□□ -1.48
COMMD3-208ENST00000470045 SNURFQ9Y675 71 aa5.78□□□□□ -1.48
COMMD3-208ENST00000470045 MDN1Q9NU22 5596 aa5.77□□□□□ -1.49
COMMD3-208ENST00000470045 SPANXA2-OT1Q8N9U9 137 aa5.75□□□□□ -1.49
COMMD3-208ENST00000470045 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
COMMD3-208ENST00000470045 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
COMMD3-208ENST00000470045 KRTAP20-1Q3LI63 56 aa5.73□□□□□ -1.49
COMMD3-208ENST00000470045 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
COMMD3-208ENST00000470045 SERP2Q8N6R1 65 aa5.72□□□□□ -1.49
COMMD3-208ENST00000470045 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
COMMD3-208ENST00000470045 KRTAP5-11Q6L8G4 156 aa5.69□□□□□ -1.5
COMMD3-208ENST00000470045 SPRR2EP22531 72 aa5.65□□□□□ -1.5
COMMD3-208ENST00000470045 SPRR2BP35325 72 aa5.65□□□□□ -1.5
COMMD3-208ENST00000470045 SPRR2AP35326 72 aa5.65□□□□□ -1.5
COMMD3-208ENST00000470045 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
COMMD3-208ENST00000470045 KRTAP10-12P60413 245 aa5.64□□□□□ -1.51
COMMD3-208ENST00000470045 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
COMMD3-208ENST00000470045 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
COMMD3-208ENST00000470045 KRTAP2-3P0C7H8 128 aa5.59□□□□□ -1.51
COMMD3-208ENST00000470045 KRTAP2-4Q9BYR9 128 aa5.59□□□□□ -1.51
COMMD3-208ENST00000470045 COA5Q86WW8 74 aa5.56□□□□□ -1.52
COMMD3-208ENST00000470045 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
COMMD3-208ENST00000470045 COX7CP15954 63 aa5.53□□□□□ -1.52
COMMD3-208ENST00000470045 H7BZZ5 65 aa5.48□□□□□ -1.53
COMMD3-208ENST00000470045 CYSTM1Q9H1C7 97 aa5.47□□□□□ -1.53
COMMD3-208ENST00000470045 SPRR2DP22532 72 aa5.45□□□□□ -1.54
COMMD3-208ENST00000470045 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
COMMD3-208ENST00000470045 SEC61GP60059 68 aa5.43□□□□□ -1.54
COMMD3-208ENST00000470045 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
COMMD3-208ENST00000470045 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
COMMD3-208ENST00000470045 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
COMMD3-208ENST00000470045 A0A1B0GU33 70 aa5.37□□□□□ -1.55
COMMD3-208ENST00000470045 SPATA8Q6RVD6 105 aa5.37□□□□□ -1.55
COMMD3-208ENST00000470045 A0A0D9SG42 100 aa5.36□□□□□ -1.55
COMMD3-208ENST00000470045 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
COMMD3-208ENST00000470045 KRTAP19-7Q3SYF9 63 aa5.31□□□□□ -1.56
COMMD3-208ENST00000470045 ANAPC13Q9BS18 74 aa5.3□□□□□ -1.56
COMMD3-208ENST00000470045 SPINT4Q6UDR6 99 aa5.29□□□□□ -1.56
COMMD3-208ENST00000470045 A0A1B0GU69 56 aa5.26□□□□□ -1.57
COMMD3-208ENST00000470045 MT1EP04732 61 aa5.25□□□□□ -1.57
COMMD3-208ENST00000470045 SMIM26A0A096LP01 95 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms