RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 KLKP1Q107X0 134 aa5.89□□□□□ -1.47
CPSF4-210ENST00000469897 KRTAP3-3Q9BYR6 98 aa5.89□□□□□ -1.47
CPSF4-210ENST00000469897 KRTAP10-5P60370 271 aa5.88□□□□□ -1.47
CPSF4-210ENST00000469897 LINC00643Q86TS7 51 aa5.88□□□□□ -1.47
CPSF4-210ENST00000469897 PCP4P48539 62 aa5.86□□□□□ -1.47
CPSF4-210ENST00000469897 MUC12Q9UKN1 5478 aa5.85□□□□□ -1.47
CPSF4-210ENST00000469897 SVIPQ8NHG7 77 aa5.85□□□□□ -1.47
CPSF4-210ENST00000469897 A0A087WVE0 104 aa5.84□□□□□ -1.47
CPSF4-210ENST00000469897 IMUPQ9GZP8 106 aa5.84□□□□□ -1.47
CPSF4-210ENST00000469897 CYP4F30PQ9H0H9 118 aa5.84□□□□□ -1.47
CPSF4-210ENST00000469897 CRIPTQ9P021 101 aa5.78□□□□□ -1.48
CPSF4-210ENST00000469897 KRTAP5-9P26371 169 aa5.76□□□□□ -1.49
CPSF4-210ENST00000469897 KRTAP20-1Q3LI63 56 aa5.76□□□□□ -1.49
CPSF4-210ENST00000469897 ATP5EP2Q5VTU8 51 aa5.76□□□□□ -1.49
CPSF4-210ENST00000469897 TRAV22A0A0B4J277 110 aa5.74□□□□□ -1.49
CPSF4-210ENST00000469897 LOC101927531A0A1B0GV80 90 aa5.73□□□□□ -1.49
CPSF4-210ENST00000469897 HIST1H4AP62805 103 aaKnown RBP5.73□□□□□ -1.49
CPSF4-210ENST00000469897 KMT2DO14686 5537 aa5.72□□□□□ -1.49
CPSF4-210ENST00000469897 MDN1Q9NU22 5596 aa5.71□□□□□ -1.5
CPSF4-210ENST00000469897 NDUFC1O43677 76 aa5.7□□□□□ -1.5
CPSF4-210ENST00000469897 H0YAA0 97 aa5.67□□□□□ -1.5
CPSF4-210ENST00000469897 ANAPC13Q9BS18 74 aa5.67□□□□□ -1.5
CPSF4-210ENST00000469897 H0Y9P7 68 aa5.65□□□□□ -1.5
CPSF4-210ENST00000469897 UQCRQO14949 82 aa5.65□□□□□ -1.5
CPSF4-210ENST00000469897 ADM2Q7Z4H4 148 aa5.65□□□□□ -1.5
CPSF4-210ENST00000469897 ATOX1O00244 68 aa5.64□□□□□ -1.51
CPSF4-210ENST00000469897 A8MUN3 132 aa5.6□□□□□ -1.51
CPSF4-210ENST00000469897 CCDC179H3BU77 68 aa5.59□□□□□ -1.51
CPSF4-210ENST00000469897 COX7CP15954 63 aa5.59□□□□□ -1.51
CPSF4-210ENST00000469897 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
CPSF4-210ENST00000469897 SERP2Q8N6R1 65 aa5.58□□□□□ -1.52
CPSF4-210ENST00000469897 SPRR2FQ96RM1 72 aa5.58□□□□□ -1.52
CPSF4-210ENST00000469897 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
CPSF4-210ENST00000469897 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
CPSF4-210ENST00000469897 MT1XP80297 61 aa5.57□□□□□ -1.52
CPSF4-210ENST00000469897 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
CPSF4-210ENST00000469897 LINC00208Q96KT6 92 aa5.56□□□□□ -1.52
CPSF4-210ENST00000469897 TRAV7A0A075B6U4 112 aa5.55□□□□□ -1.52
CPSF4-210ENST00000469897 SMIM20Q8N5G0 67 aa5.55□□□□□ -1.52
CPSF4-210ENST00000469897 SPRR2EP22531 72 aa5.54□□□□□ -1.52
CPSF4-210ENST00000469897 SPRR2BP35325 72 aa5.54□□□□□ -1.52
CPSF4-210ENST00000469897 SPRR2AP35326 72 aa5.54□□□□□ -1.52
CPSF4-210ENST00000469897 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
CPSF4-210ENST00000469897 OCR1Q9BZK8 76 aa5.51□□□□□ -1.53
CPSF4-210ENST00000469897 P0C880 135 aa5.5□□□□□ -1.53
CPSF4-210ENST00000469897 R4GN34 69 aa5.5□□□□□ -1.53
CPSF4-210ENST00000469897 MP68P56378 58 aa5.48□□□□□ -1.53
CPSF4-210ENST00000469897 M0QZ58 72 aa5.45□□□□□ -1.54
CPSF4-210ENST00000469897 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
CPSF4-210ENST00000469897 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
CPSF4-210ENST00000469897 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
CPSF4-210ENST00000469897 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
CPSF4-210ENST00000469897 CYSTM1Q9H1C7 97 aa5.44□□□□□ -1.54
CPSF4-210ENST00000469897 C20orf197Q8N268 126 aa5.43□□□□□ -1.54
CPSF4-210ENST00000469897 LINC01554Q52M75 96 aa5.42□□□□□ -1.54
CPSF4-210ENST00000469897 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
CPSF4-210ENST00000469897 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.54
CPSF4-210ENST00000469897 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
CPSF4-210ENST00000469897 H7BZZ5 65 aa5.37□□□□□ -1.55
CPSF4-210ENST00000469897 TMEM258P61165 79 aa5.37□□□□□ -1.55
CPSF4-210ENST00000469897 DMAC1Q96GE9 116 aa5.37□□□□□ -1.55
CPSF4-210ENST00000469897 SNURFQ9Y675 71 aa5.37□□□□□ -1.55
CPSF4-210ENST00000469897 H3BPC8 53 aa5.35□□□□□ -1.55
CPSF4-210ENST00000469897 SPRR2DP22532 72 aa5.35□□□□□ -1.55
CPSF4-210ENST00000469897 KRTAP10-7P60409 375 aaPredicted RBP5.34□□□□□ -1.55
CPSF4-210ENST00000469897 RPS28P62857 69 aaKnown RBP5.31□□□□□ -1.56
CPSF4-210ENST00000469897 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
CPSF4-210ENST00000469897 ATP5EP56381 51 aaPredicted RBP5.26□□□□□ -1.57
CPSF4-210ENST00000469897 ACYP2P14621 99 aa5.24□□□□□ -1.57
CPSF4-210ENST00000469897 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
CPSF4-210ENST00000469897 SPANXA2-OT1Q8N9U9 137 aa5.21□□□□□ -1.58
CPSF4-210ENST00000469897 SERP1Q9Y6X1 66 aa5.21□□□□□ -1.58
CPSF4-210ENST00000469897 SPTSSBQ8NFR3 76 aa5.19□□□□□ -1.58
CPSF4-210ENST00000469897 CHKB-CPT1BH3BT56 60 aa5.14□□□□□ -1.59
CPSF4-210ENST00000469897 SMIM26A0A096LP01 95 aa5.11□□□□□ -1.59
CPSF4-210ENST00000469897 DSTQ03001 7570 aaKnown RBP5.08□□□□□ -1.6
CPSF4-210ENST00000469897 KRTAP13-4Q3LI77 160 aa5.06□□□□□ -1.6
CPSF4-210ENST00000469897 CAMK2N1Q7Z7J9 78 aa5.04□□□□□ -1.6
CPSF4-210ENST00000469897 GPR98Q8WXG9 6306 aa5.04□□□□□ -1.6
CPSF4-210ENST00000469897 COA5Q86WW8 74 aa5.02□□□□□ -1.61
CPSF4-210ENST00000469897 Q1T7F1 81 aa4.99□□□□□ -1.61
CPSF4-210ENST00000469897 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
CPSF4-210ENST00000469897 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
CPSF4-210ENST00000469897 MT1EP04732 61 aa4.95□□□□□ -1.62
CPSF4-210ENST00000469897 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
CPSF4-210ENST00000469897 KRTAP19-3Q7Z4W3 81 aa4.94□□□□□ -1.62
CPSF4-210ENST00000469897 V9GYY9 64 aa4.94□□□□□ -1.62
CPSF4-210ENST00000469897 A0A0D9SG42 100 aa4.91□□□□□ -1.62
CPSF4-210ENST00000469897 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.63
CPSF4-210ENST00000469897 SPATA8Q6RVD6 105 aa4.86□□□□□ -1.63
CPSF4-210ENST00000469897 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
CPSF4-210ENST00000469897 SEC61GP60059 68 aa4.85□□□□□ -1.63
CPSF4-210ENST00000469897 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
CPSF4-210ENST00000469897 PSPHP1O15172 72 aa4.83□□□□□ -1.64
CPSF4-210ENST00000469897 MT1GP13640 62 aa4.82□□□□□ -1.64
CPSF4-210ENST00000469897 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
CPSF4-210ENST00000469897 A0A1B0GU33 70 aa4.8□□□□□ -1.64
CPSF4-210ENST00000469897 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
CPSF4-210ENST00000469897 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
CPSF4-210ENST00000469897 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms