RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 LRP1Q07954 4544 aaKnown RBP6.81□□□□□ -1.32
USP11-206ENST00000469080 A0A1B0GU33 70 aa6.81□□□□□ -1.32
USP11-206ENST00000469080 FAT3Q8TDW7 4589 aa6.78□□□□□ -1.32
USP11-206ENST00000469080 KIAA1109Q2LD37 5005 aa6.76□□□□□ -1.33
USP11-206ENST00000469080 APOBP04114 4563 aaKnown RBP6.73□□□□□ -1.33
USP11-206ENST00000469080 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
USP11-206ENST00000469080 KRTAP15-1Q3LI76 137 aa6.71□□□□□ -1.33
USP11-206ENST00000469080 TPRXLQ17RH7 258 aa6.69□□□□□ -1.34
USP11-206ENST00000469080 A0A1B0GVY2 172 aa6.69□□□□□ -1.34
USP11-206ENST00000469080 H1FX-AS1Q4G0G2 97 aa6.68□□□□□ -1.34
USP11-206ENST00000469080 RYR1P21817 5038 aa6.63□□□□□ -1.35
USP11-206ENST00000469080 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
USP11-206ENST00000469080 A0A0D9SG42 100 aa6.6□□□□□ -1.35
USP11-206ENST00000469080 J3QL48 77 aa6.56□□□□□ -1.36
USP11-206ENST00000469080 KRTAP17-1Q9BYP8 105 aa6.54□□□□□ -1.36
USP11-206ENST00000469080 COX6B2Q6YFQ2 88 aa6.51□□□□□ -1.37
USP11-206ENST00000469080 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
USP11-206ENST00000469080 HSPG2P98160 4391 aa6.5□□□□□ -1.37
USP11-206ENST00000469080 KRTAP10-4P60372 401 aaPredicted RBP6.5□□□□□ -1.37
USP11-206ENST00000469080 SEC61BP60468 96 aaKnown RBP6.48□□□□□ -1.37
USP11-206ENST00000469080 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
USP11-206ENST00000469080 XP32Q5T750 250 aa6.4□□□□□ -1.38
USP11-206ENST00000469080 LRP2P98164 4655 aa6.4□□□□□ -1.39
USP11-206ENST00000469080 KRTAP10-8P60410 259 aa6.38□□□□□ -1.39
USP11-206ENST00000469080 RPS29P62273 56 aaKnown RBP6.37□□□□□ -1.39
USP11-206ENST00000469080 KRTAP3-1Q9BYR8 98 aa6.36□□□□□ -1.39
USP11-206ENST00000469080 LPAP08519 4548 aa6.35□□□□□ -1.39
USP11-206ENST00000469080 PKHD1L1Q86WI1 4243 aa6.34□□□□□ -1.39
USP11-206ENST00000469080 S4R3F8 94 aa6.3□□□□□ -1.4
USP11-206ENST00000469080 MT1HL1P0DM35 61 aa6.28□□□□□ -1.4
USP11-206ENST00000469080 KRTAP13-4Q3LI77 160 aa6.26□□□□□ -1.41
USP11-206ENST00000469080 ABCA13Q86UQ4 5058 aa6.26□□□□□ -1.41
USP11-206ENST00000469080 HERC2O95714 4834 aa6.24□□□□□ -1.41
USP11-206ENST00000469080 MUC2Q02817 5179 aa6.2□□□□□ -1.42
USP11-206ENST00000469080 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
USP11-206ENST00000469080 TNXBP22105 4242 aa6.19□□□□□ -1.42
USP11-206ENST00000469080 BIRC6Q9NR09 4857 aa6.18□□□□□ -1.42
USP11-206ENST00000469080 KRTAP12-2P59991 146 aa6.16□□□□□ -1.42
USP11-206ENST00000469080 KRTAP10-6P60371 365 aaPredicted RBP6.12□□□□□ -1.43
USP11-206ENST00000469080 HERC1Q15751 4861 aa6.07□□□□□ -1.44
USP11-206ENST00000469080 M0QZ58 72 aa6.06□□□□□ -1.44
USP11-206ENST00000469080 PCLOQ9Y6V0 5065 aa6.05□□□□□ -1.44
USP11-206ENST00000469080 R4GN34 69 aa6.04□□□□□ -1.44
USP11-206ENST00000469080 KRTAP3-2Q9BYR7 98 aa6.04□□□□□ -1.44
USP11-206ENST00000469080 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.44
USP11-206ENST00000469080 M0R2T5 61 aa6.02□□□□□ -1.45
USP11-206ENST00000469080 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
USP11-206ENST00000469080 KRTAP12-1P59990 96 aa6□□□□□ -1.45
USP11-206ENST00000469080 RNF213Q63HN8 5207 aa5.99□□□□□ -1.45
USP11-206ENST00000469080 KRTAP4-1Q9BYQ7 146 aa5.93□□□□□ -1.46
USP11-206ENST00000469080 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
USP11-206ENST00000469080 LORP23490 312 aaPredicted RBP5.83□□□□□ -1.48
USP11-206ENST00000469080 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
USP11-206ENST00000469080 PRO2289Q9P1D8 64 aa5.77□□□□□ -1.49
USP11-206ENST00000469080 HMCN2Q8NDA2 5059 aa5.71□□□□□ -1.5
USP11-206ENST00000469080 KRTAP10-10P60014 251 aa5.58□□□□□ -1.52
USP11-206ENST00000469080 PP632Q6XCG6 107 aa5.57□□□□□ -1.52
USP11-206ENST00000469080 MUC17Q685J3 4493 aa5.56□□□□□ -1.52
USP11-206ENST00000469080 FSIP2Q5CZC0 6907 aa5.48□□□□□ -1.53
USP11-206ENST00000469080 INE1O15225 51 aa5.44□□□□□ -1.54
USP11-206ENST00000469080 FLGP20930 4061 aaPredicted RBP5.39□□□□□ -1.55
USP11-206ENST00000469080 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
USP11-206ENST00000469080 TNP1P09430 55 aa5.33□□□□□ -1.56
USP11-206ENST00000469080 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
USP11-206ENST00000469080 USH2AO75445 5202 aa5.31□□□□□ -1.56
USP11-206ENST00000469080 MT1HP80294 61 aa5.31□□□□□ -1.56
USP11-206ENST00000469080 LCE2CQ5TA81 110 aa5.28□□□□□ -1.56
USP11-206ENST00000469080 MT1FP04733 61 aa5.24□□□□□ -1.57
USP11-206ENST00000469080 MT2AP02795 61 aa5.2□□□□□ -1.58
USP11-206ENST00000469080 KRTAP19-1Q8IUB9 90 aa5.14□□□□□ -1.59
USP11-206ENST00000469080 KMT2DO14686 5537 aa5.1□□□□□ -1.59
USP11-206ENST00000469080 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
USP11-206ENST00000469080 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
USP11-206ENST00000469080 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
USP11-206ENST00000469080 SPRR2GQ9BYE4 73 aa5.01□□□□□ -1.61
USP11-206ENST00000469080 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
USP11-206ENST00000469080 LCE2AQ5TA79 106 aaPredicted RBP4.9□□□□□ -1.63
USP11-206ENST00000469080 MT1BP07438 61 aa4.89□□□□□ -1.63
USP11-206ENST00000469080 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
USP11-206ENST00000469080 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
USP11-206ENST00000469080 MT1XP80297 61 aa4.83□□□□□ -1.64
USP11-206ENST00000469080 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
USP11-206ENST00000469080 LCE2BO14633 110 aa4.81□□□□□ -1.64
USP11-206ENST00000469080 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
USP11-206ENST00000469080 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
USP11-206ENST00000469080 KRTAP4-8A0A0G2JLE6 195 aa4.79□□□□□ -1.64
USP11-206ENST00000469080 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
USP11-206ENST00000469080 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
USP11-206ENST00000469080 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
USP11-206ENST00000469080 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
USP11-206ENST00000469080 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.66
USP11-206ENST00000469080 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
USP11-206ENST00000469080 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
USP11-206ENST00000469080 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
USP11-206ENST00000469080 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
USP11-206ENST00000469080 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.67
USP11-206ENST00000469080 KRTAP8-1Q8IUC2 63 aa4.56□□□□□ -1.68
USP11-206ENST00000469080 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
USP11-206ENST00000469080 KRTAP9-2Q9BYQ4 174 aa4.39□□□□□ -1.71
USP11-206ENST00000469080 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms