RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, human

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCCAG3-208	ENST00000466579		A0A087WVE0	104 aa		4.53	□□□□□ -1.68
SDCCAG3-208	ENST00000466579	UQCRQ	O14949	82 aa		4.53	□□□□□ -1.68
SDCCAG3-208	ENST00000466579	CYP4F30P	Q9H0H9	118 aa		4.53	□□□□□ -1.68
SDCCAG3-208	ENST00000466579	CRCT1	Q9UGL9	99 aa		4.53	□□□□□ -1.68
SDCCAG3-208	ENST00000466579	LOC101927531	A0A1B0GV80	90 aa		4.52	□□□□□ -1.69
SDCCAG3-208	ENST00000466579		H3BS24	57 aa		4.52	□□□□□ -1.69
SDCCAG3-208	ENST00000466579		K7ERU9	68 aa		4.5	□□□□□ -1.69
SDCCAG3-208	ENST00000466579	ATOX1	O00244	68 aa		4.5	□□□□□ -1.69
SDCCAG3-208	ENST00000466579	KRTAP10-10	P60014	251 aa		4.5	□□□□□ -1.69
SDCCAG3-208	ENST00000466579	C1orf64	Q8NEQ6	169 aa		4.5	□□□□□ -1.69
SDCCAG3-208	ENST00000466579	FSIP2	Q5CZC0	6907 aa		4.5	□□□□□ -1.69
SDCCAG3-208	ENST00000466579	OCR1	Q9BZK8	76 aa		4.49	□□□□□ -1.69
SDCCAG3-208	ENST00000466579	USH2A	O75445	5202 aa		4.49	□□□□□ -1.69
SDCCAG3-208	ENST00000466579		H0Y9P7	68 aa		4.48	□□□□□ -1.69
SDCCAG3-208	ENST00000466579		S4R3F8	94 aa		4.45	□□□□□ -1.7
SDCCAG3-208	ENST00000466579	IMUP	Q9GZP8	106 aa		4.44	□□□□□ -1.7
SDCCAG3-208	ENST00000466579	SSPO	A2VEC9	5147 aa		4.43	□□□□□ -1.7
SDCCAG3-208	ENST00000466579	LCA10	Q71F78	164 aa		4.43	□□□□□ -1.7
SDCCAG3-208	ENST00000466579	C5orf47	Q569G3	176 aa		4.42	□□□□□ -1.7
SDCCAG3-208	ENST00000466579	MP68	P56378	58 aa		4.41	□□□□□ -1.7
SDCCAG3-208	ENST00000466579	CSAG1	Q6PB30	78 aa		4.41	□□□□□ -1.7
SDCCAG3-208	ENST00000466579	LINC00208	Q96KT6	92 aa		4.41	□□□□□ -1.7
SDCCAG3-208	ENST00000466579		H3BPC8	53 aa		4.4	□□□□□ -1.71
SDCCAG3-208	ENST00000466579	MT-ATP8	P03928	68 aa		4.39	□□□□□ -1.71
SDCCAG3-208	ENST00000466579	KLKP1	Q107X0	134 aa		4.39	□□□□□ -1.71
SDCCAG3-208	ENST00000466579		A8MUN3	132 aa		4.38	□□□□□ -1.71
SDCCAG3-208	ENST00000466579	SMIM20	Q8N5G0	67 aa		4.33	□□□□□ -1.72
SDCCAG3-208	ENST00000466579	TRAV7	A0A075B6U4	112 aa		4.32	□□□□□ -1.72
SDCCAG3-208	ENST00000466579	FAM236A	A0A1B0GUQ0	79 aa		4.31	□□□□□ -1.72
SDCCAG3-208	ENST00000466579	FAM236B	A0A1B0GV22	79 aa		4.31	□□□□□ -1.72
SDCCAG3-208	ENST00000466579	KRTAP19-6	Q3LI70	58 aa		4.31	□□□□□ -1.72
SDCCAG3-208	ENST00000466579	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.31	□□□□□ -1.72
SDCCAG3-208	ENST00000466579		H0YAA0	97 aa		4.3	□□□□□ -1.72
SDCCAG3-208	ENST00000466579	NDUFC1	O43677	76 aa		4.3	□□□□□ -1.72
SDCCAG3-208	ENST00000466579	DMAC1	Q96GE9	116 aa		4.3	□□□□□ -1.72
SDCCAG3-208	ENST00000466579	SPRR2G	Q9BYE4	73 aa		4.3	□□□□□ -1.72
SDCCAG3-208	ENST00000466579	KRTAP19-8	Q3LI54	63 aa		4.26	□□□□□ -1.73
SDCCAG3-208	ENST00000466579	CRIPT	Q9P021	101 aa		4.26	□□□□□ -1.73
SDCCAG3-208	ENST00000466579	MT1B	P07438	61 aa		4.23	□□□□□ -1.73
SDCCAG3-208	ENST00000466579	SERP2	Q8N6R1	65 aa		4.21	□□□□□ -1.74
SDCCAG3-208	ENST00000466579		Q5VV11	94 aa		4.2	□□□□□ -1.74
SDCCAG3-208	ENST00000466579	ADM2	Q7Z4H4	148 aa		4.19	□□□□□ -1.74
SDCCAG3-208	ENST00000466579	ACYP2	P14621	99 aa		4.18	□□□□□ -1.74
SDCCAG3-208	ENST00000466579	RPS28	P62857	69 aa	Known RBP	4.18	□□□□□ -1.74
SDCCAG3-208	ENST00000466579	ANAPC13	Q9BS18	74 aa		4.18	□□□□□ -1.74
SDCCAG3-208	ENST00000466579	SPANXA2-OT1	Q8N9U9	137 aa		4.17	□□□□□ -1.74
SDCCAG3-208	ENST00000466579	SNURF	Q9Y675	71 aa		4.17	□□□□□ -1.74
SDCCAG3-208	ENST00000466579	C20orf197	Q8N268	126 aa		4.15	□□□□□ -1.75
SDCCAG3-208	ENST00000466579		P0C880	135 aa		4.13	□□□□□ -1.75
SDCCAG3-208	ENST00000466579	COX7C	P15954	63 aa		4.11	□□□□□ -1.75
SDCCAG3-208	ENST00000466579	SEC61G	P60059	68 aa		4.11	□□□□□ -1.75
SDCCAG3-208	ENST00000466579	KRTAP10-5	P60370	271 aa		4.11	□□□□□ -1.75
SDCCAG3-208	ENST00000466579	SPTSSB	Q8NFR3	76 aa		4.1	□□□□□ -1.75
SDCCAG3-208	ENST00000466579	MACF1	Q9UPN3	7388 aa	Known RBP	4.1	□□□□□ -1.75
SDCCAG3-208	ENST00000466579		A6NN06	94 aa		4.09	□□□□□ -1.75
SDCCAG3-208	ENST00000466579	PRO0628	Q9UI54	55 aa		4.07	□□□□□ -1.76
SDCCAG3-208	ENST00000466579		R4GN34	69 aa		4.07	□□□□□ -1.76
SDCCAG3-208	ENST00000466579	CHKB-CPT1B	H3BT56	60 aa		4.06	□□□□□ -1.76
SDCCAG3-208	ENST00000466579		V9GYY9	64 aa		4.06	□□□□□ -1.76
SDCCAG3-208	ENST00000466579		M0QZ58	72 aa		4.04	□□□□□ -1.76
SDCCAG3-208	ENST00000466579	CCDC179	H3BU77	68 aa		4.03	□□□□□ -1.76
SDCCAG3-208	ENST00000466579		H7BZZ5	65 aa		4.03	□□□□□ -1.76
SDCCAG3-208	ENST00000466579	CYSTM1	Q9H1C7	97 aa		4.03	□□□□□ -1.76
SDCCAG3-208	ENST00000466579	COA5	Q86WW8	74 aa		4.01	□□□□□ -1.77
SDCCAG3-208	ENST00000466579	KRTAP6-3	Q3LI67	103 aa		4	□□□□□ -1.77
SDCCAG3-208	ENST00000466579	TMEM258	P61165	79 aa		3.99	□□□□□ -1.77
SDCCAG3-208	ENST00000466579	MT1X	P80297	61 aa		3.99	□□□□□ -1.77
SDCCAG3-208	ENST00000466579	PLAC4	Q8WY50	150 aa		3.99	□□□□□ -1.77
SDCCAG3-208	ENST00000466579	SYNE2	Q8WXH0	6885 aa	Known RBP	3.98	□□□□□ -1.77
SDCCAG3-208	ENST00000466579	PRO2289	Q9P1D8	64 aa		3.96	□□□□□ -1.78
SDCCAG3-208	ENST00000466579	LINC01554	Q52M75	96 aa		3.93	□□□□□ -1.78
SDCCAG3-208	ENST00000466579	KRTAP13-4	Q3LI77	160 aa		3.91	□□□□□ -1.78
SDCCAG3-208	ENST00000466579	KRTAP12-2	P59991	146 aa		3.9	□□□□□ -1.79
SDCCAG3-208	ENST00000466579	KRTAP5-9	P26371	169 aa		3.89	□□□□□ -1.79
SDCCAG3-208	ENST00000466579	ATP5E	P56381	51 aa	Predicted RBP	3.87	□□□□□ -1.79
SDCCAG3-208	ENST00000466579	SERP1	Q9Y6X1	66 aa		3.87	□□□□□ -1.79
SDCCAG3-208	ENST00000466579	SMIM26	A0A096LP01	95 aa		3.86	□□□□□ -1.79
SDCCAG3-208	ENST00000466579	MUC12	Q9UKN1	5478 aa		3.85	□□□□□ -1.79
SDCCAG3-208	ENST00000466579	KRTAP23-1	A1A580	65 aa		3.85	□□□□□ -1.79
SDCCAG3-208	ENST00000466579	PMAIP1	Q13794	54 aa		3.85	□□□□□ -1.79
SDCCAG3-208	ENST00000466579	KMT2D	O14686	5537 aa		3.84	□□□□□ -1.79
SDCCAG3-208	ENST00000466579		A0A1B0GU33	70 aa		3.81	□□□□□ -1.8
SDCCAG3-208	ENST00000466579	KRTAP10-12	P60413	245 aa		3.81	□□□□□ -1.8
SDCCAG3-208	ENST00000466579	KRTAP10-7	P60409	375 aa	Predicted RBP	3.79	□□□□□ -1.8
SDCCAG3-208	ENST00000466579	NEB	P20929	6669 aa		3.79	□□□□□ -1.8
SDCCAG3-208	ENST00000466579		A0A1B0GU69	56 aa		3.78	□□□□□ -1.8
SDCCAG3-208	ENST00000466579	SPATA8	Q6RVD6	105 aa		3.78	□□□□□ -1.8
SDCCAG3-208	ENST00000466579	MDN1	Q9NU22	5596 aa		3.76	□□□□□ -1.81
SDCCAG3-208	ENST00000466579	KRTAP8-1	Q8IUC2	63 aa		3.76	□□□□□ -1.81
SDCCAG3-208	ENST00000466579		A0A0D9SG42	100 aa		3.74	□□□□□ -1.81
SDCCAG3-208	ENST00000466579	KRTAP12-1	P59990	96 aa		3.74	□□□□□ -1.81
SDCCAG3-208	ENST00000466579	CAMK2N1	Q7Z7J9	78 aa		3.74	□□□□□ -1.81
SDCCAG3-208	ENST00000466579	BRK1	Q8WUW1	75 aa		3.74	□□□□□ -1.81
SDCCAG3-208	ENST00000466579	LINC01558	Q9Y6Z2	57 aa		3.74	□□□□□ -1.81
SDCCAG3-208	ENST00000466579		A0A0A0MQY5	61 aa		3.73	□□□□□ -1.81
SDCCAG3-208	ENST00000466579	KRTAP15-1	Q3LI76	137 aa		3.73	□□□□□ -1.81
SDCCAG3-208	ENST00000466579	SPRR2F	Q96RM1	72 aa		3.73	□□□□□ -1.81
SDCCAG3-208	ENST00000466579	PRR15L	Q9BU68	103 aa		3.7	□□□□□ -1.82
SDCCAG3-208	ENST00000466579	SPINT4	Q6UDR6	99 aa		3.68	□□□□□ -1.82
SDCCAG3-208	ENST00000466579	KTN1-AS1	Q86SY8	53 aa		3.68	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms