RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
SORT1-202ENST00000466471 DNAH8Q96JB1 4490 aa2.05□□□□□ -2.08
SORT1-202ENST00000466471 A8MU10 97 aa2.04□□□□□ -2.08
SORT1-202ENST00000466471 H0Y9P7 68 aa2.04□□□□□ -2.08
SORT1-202ENST00000466471 MOBPQ13875 183 aa2.04□□□□□ -2.08
SORT1-202ENST00000466471 MMP24-AS1A0A0U1RRL7 71 aa2.03□□□□□ -2.08
SORT1-202ENST00000466471 LRCOL1A6NCL2 159 aa2.03□□□□□ -2.08
SORT1-202ENST00000466471 SMR3BP02814 79 aaPredicted RBP2.03□□□□□ -2.08
SORT1-202ENST00000466471 MT1HL1P0DM35 61 aa2.03□□□□□ -2.08
SORT1-202ENST00000466471 CASC2Q6XLA1 102 aa2.03□□□□□ -2.08
SORT1-202ENST00000466471 PRR15LQ9BU68 103 aa2.03□□□□□ -2.08
SORT1-202ENST00000466471 ZNF861PO60384 105 aa2.02□□□□□ -2.09
SORT1-202ENST00000466471 KRTAP13-3Q3SY46 172 aa2.02□□□□□ -2.09
SORT1-202ENST00000466471 Q5W150 140 aa2.02□□□□□ -2.09
SORT1-202ENST00000466471 SPATA8Q6RVD6 105 aa2.02□□□□□ -2.09
SORT1-202ENST00000466471 USH2AO75445 5202 aa2.01□□□□□ -2.09
SORT1-202ENST00000466471 A0A087WSZ3 146 aa2.01□□□□□ -2.09
SORT1-202ENST00000466471 IGKV2-24A0A0C4DH68 120 aa2.01□□□□□ -2.09
SORT1-202ENST00000466471 A6NED7 52 aa2.01□□□□□ -2.09
SORT1-202ENST00000466471 KRTAP9-6A8MVA2 160 aa2.01□□□□□ -2.09
SORT1-202ENST00000466471 WFDC10BQ8IUB3 73 aa2.01□□□□□ -2.09
SORT1-202ENST00000466471 KRTAP13-1Q8IUC0 172 aa2.01□□□□□ -2.09
SORT1-202ENST00000466471 DEFB105AQ8NG35 78 aa2.01□□□□□ -2.09
SORT1-202ENST00000466471 Q96NJ1 140 aa2.01□□□□□ -2.09
SORT1-202ENST00000466471 HRES1P13985 223 aa2□□□□□ -2.09
SORT1-202ENST00000466471 KRTAP10-4P60372 401 aaPredicted RBP2□□□□□ -2.09
SORT1-202ENST00000466471 DEFB116Q30KQ4 102 aa2□□□□□ -2.09
SORT1-202ENST00000466471 LINC00483Q53H64 154 aa2□□□□□ -2.09
SORT1-202ENST00000466471 OBSCNQ5VST9 7968 aa1.99□□□□□ -2.09
SORT1-202ENST00000466471 SPINK7P58062 85 aa1.99□□□□□ -2.09
SORT1-202ENST00000466471 DEFB135Q30KP9 77 aa1.99□□□□□ -2.09
SORT1-202ENST00000466471 LUZP6Q538Z0 58 aa1.99□□□□□ -2.09
SORT1-202ENST00000466471 WFDC13Q8IUB5 93 aa1.99□□□□□ -2.09
SORT1-202ENST00000466471 FCGBPQ9Y6R7 5405 aaPredicted RBP1.99□□□□□ -2.09
SORT1-202ENST00000466471 PANO1I0J062 215 aa1.98□□□□□ -2.09
SORT1-202ENST00000466471 KRTAP10-1P60331 282 aa1.98□□□□□ -2.09
SORT1-202ENST00000466471 LINC01554Q52M75 96 aa1.98□□□□□ -2.09
SORT1-202ENST00000466471 SPTSSBQ8NFR3 76 aa1.98□□□□□ -2.09
SORT1-202ENST00000466471 CIRBP-AS1Q8TBR5 109 aa1.98□□□□□ -2.09
SORT1-202ENST00000466471 DMAC1Q96GE9 116 aa1.98□□□□□ -2.09
SORT1-202ENST00000466471 A0A1W2PNN7 141 aa1.97□□□□□ -2.09
SORT1-202ENST00000466471 ACYP2P14621 99 aa1.97□□□□□ -2.09
SORT1-202ENST00000466471 LINC00313P59037 77 aa1.97□□□□□ -2.09
SORT1-202ENST00000466471 MRPL34Q9BQ48 92 aaKnown RBP1.97□□□□□ -2.09
SORT1-202ENST00000466471 ZNF706Q9Y5V0 76 aaPredicted RBP1.97□□□□□ -2.09
SORT1-202ENST00000466471 SYNE2Q8WXH0 6885 aaKnown RBP1.97□□□□□ -2.09
SORT1-202ENST00000466471 K7ERS5 55 aa1.96□□□□□ -2.1
SORT1-202ENST00000466471 DEFB4AO15263 64 aa1.96□□□□□ -2.1
SORT1-202ENST00000466471 SPAG11AQ6PDA7 123 aa1.96□□□□□ -2.1
SORT1-202ENST00000466471 ANAPC11Q9NYG5 84 aa1.96□□□□□ -2.1
SORT1-202ENST00000466471 NBDYA0A0U1RRE5 68 aa1.95□□□□□ -2.1
SORT1-202ENST00000466471 KRTAP1-4P0C5Y4 121 aa1.95□□□□□ -2.1
SORT1-202ENST00000466471 KRTAP10-12P60413 245 aa1.95□□□□□ -2.1
SORT1-202ENST00000466471 NEBP20929 6669 aa1.95□□□□□ -2.1
SORT1-202ENST00000466471 UQCR11O14957 56 aa1.94□□□□□ -2.1
SORT1-202ENST00000466471 HTN3P15516 51 aa1.94□□□□□ -2.1
SORT1-202ENST00000466471 UBE2DNLQ8IWF7 75 aa1.94□□□□□ -2.1
SORT1-202ENST00000466471 RETNLBQ9BQ08 111 aa1.94□□□□□ -2.1
SORT1-202ENST00000466471 A0A096LNI7 61 aa1.93□□□□□ -2.1
SORT1-202ENST00000466471 A0A0G2JQZ4 141 aa1.93□□□□□ -2.1
SORT1-202ENST00000466471 IGLV7-43P04211 117 aa1.93□□□□□ -2.1
SORT1-202ENST00000466471 PRLHP81277 87 aa1.93□□□□□ -2.1
SORT1-202ENST00000466471 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
SORT1-202ENST00000466471 PCOTHQ58A44 107 aa1.93□□□□□ -2.1
SORT1-202ENST00000466471 KRTAP11-1Q8IUC1 163 aa1.93□□□□□ -2.1
SORT1-202ENST00000466471 MIR22HGQ0VDD5 57 aa1.92□□□□□ -2.1
SORT1-202ENST00000466471 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
SORT1-202ENST00000466471 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
SORT1-202ENST00000466471 A0A1B0GU69 56 aa1.91□□□□□ -2.1
SORT1-202ENST00000466471 Q6ZRN7 208 aaPredicted RBP1.91□□□□□ -2.1
SORT1-202ENST00000466471 SSBP3-AS1Q7Z2R9 100 aa1.91□□□□□ -2.1
SORT1-202ENST00000466471 Q6ZSA8 131 aa1.9□□□□□ -2.11
SORT1-202ENST00000466471 ADM2Q7Z4H4 148 aa1.89□□□□□ -2.11
SORT1-202ENST00000466471 SPACA4Q8TDM5 124 aa1.89□□□□□ -2.11
SORT1-202ENST00000466471 A8MUU9 505 aa1.88□□□□□ -2.11
SORT1-202ENST00000466471 KRTAP6-3Q3LI67 103 aa1.88□□□□□ -2.11
SORT1-202ENST00000466471 SPINT4Q6UDR6 99 aa1.88□□□□□ -2.11
SORT1-202ENST00000466471 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
SORT1-202ENST00000466471 MUC12Q9UKN1 5478 aa1.87□□□□□ -2.11
SORT1-202ENST00000466471 KRTAP25-1Q3LHN0 102 aa1.87□□□□□ -2.11
SORT1-202ENST00000466471 MUC17Q685J3 4493 aa1.87□□□□□ -2.11
SORT1-202ENST00000466471 ROMO1P60602 79 aa1.86□□□□□ -2.11
SORT1-202ENST00000466471 CSAG1Q6PB30 78 aa1.86□□□□□ -2.11
SORT1-202ENST00000466471 A0A087WTM6 91 aa1.85□□□□□ -2.11
SORT1-202ENST00000466471 KMT2DO14686 5537 aa1.84□□□□□ -2.11
SORT1-202ENST00000466471 LCE3CQ5T5A8 94 aa1.84□□□□□ -2.11
SORT1-202ENST00000466471 LINC00304Q8N9R0 145 aa1.84□□□□□ -2.11
SORT1-202ENST00000466471 A0A1B0GU33 70 aa1.83□□□□□ -2.12
SORT1-202ENST00000466471 RPS29P62273 56 aaKnown RBP1.83□□□□□ -2.12
SORT1-202ENST00000466471 PSORS1C2Q9UIG4 136 aa1.83□□□□□ -2.12
SORT1-202ENST00000466471 H0YAA0 97 aa1.82□□□□□ -2.12
SORT1-202ENST00000466471 KRTAP10-8P60410 259 aa1.82□□□□□ -2.12
SORT1-202ENST00000466471 COX6B2Q6YFQ2 88 aa1.82□□□□□ -2.12
SORT1-202ENST00000466471 KRTAP4-3Q9BYR4 195 aa1.81□□□□□ -2.12
SORT1-202ENST00000466471 H1FX-AS1Q4G0G2 97 aa1.8□□□□□ -2.12
SORT1-202ENST00000466471 C20orf166-AS1Q96NR2 134 aa1.79□□□□□ -2.12
SORT1-202ENST00000466471 MDN1Q9NU22 5596 aa1.78□□□□□ -2.12
SORT1-202ENST00000466471 SPINK1P00995 79 aa1.78□□□□□ -2.12
SORT1-202ENST00000466471 P0C880 135 aa1.78□□□□□ -2.12
SORT1-202ENST00000466471 KRTAP13-2Q52LG2 175 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms