RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 Q8N1X5 172 aa4.82□□□□□ -1.64
ACTB-208ENST00000464611 LINC00304Q8N9R0 145 aa4.82□□□□□ -1.64
ACTB-208ENST00000464611 RYR1P21817 5038 aa4.81□□□□□ -1.64
ACTB-208ENST00000464611 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
ACTB-208ENST00000464611 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
ACTB-208ENST00000464611 SPTSSBQ8NFR3 76 aa4.78□□□□□ -1.64
ACTB-208ENST00000464611 IGKV2D-30A0A075B6S6 120 aa4.77□□□□□ -1.65
ACTB-208ENST00000464611 C7orf65Q6ZTY9 151 aa4.77□□□□□ -1.65
ACTB-208ENST00000464611 FAT1Q14517 4588 aa4.77□□□□□ -1.65
ACTB-208ENST00000464611 A0A1B0GU69 56 aa4.75□□□□□ -1.65
ACTB-208ENST00000464611 LCA10Q71F78 164 aa4.75□□□□□ -1.65
ACTB-208ENST00000464611 KRTAP10-4P60372 401 aaPredicted RBP4.74□□□□□ -1.65
ACTB-208ENST00000464611 HERC2O95714 4834 aa4.74□□□□□ -1.65
ACTB-208ENST00000464611 VPS13BQ7Z7G8 4022 aa4.73□□□□□ -1.65
ACTB-208ENST00000464611 PKHD1L1Q86WI1 4243 aa4.72□□□□□ -1.65
ACTB-208ENST00000464611 A8MUU9 505 aa4.72□□□□□ -1.65
ACTB-208ENST00000464611 C20orf166-AS1Q96NR2 134 aa4.72□□□□□ -1.65
ACTB-208ENST00000464611 RETNLBQ9BQ08 111 aa4.71□□□□□ -1.66
ACTB-208ENST00000464611 UQCR11O14957 56 aa4.7□□□□□ -1.66
ACTB-208ENST00000464611 SEC61GP60059 68 aa4.7□□□□□ -1.66
ACTB-208ENST00000464611 SPINK7P58062 85 aa4.69□□□□□ -1.66
ACTB-208ENST00000464611 SPATA8Q6RVD6 105 aa4.69□□□□□ -1.66
ACTB-208ENST00000464611 KTN1-AS1Q86SY8 53 aa4.69□□□□□ -1.66
ACTB-208ENST00000464611 A6NN06 94 aa4.67□□□□□ -1.66
ACTB-208ENST00000464611 MIR22HGQ0VDD5 57 aa4.63□□□□□ -1.67
ACTB-208ENST00000464611 A8MU10 97 aa4.62□□□□□ -1.67
ACTB-208ENST00000464611 ABCA13Q86UQ4 5058 aa4.62□□□□□ -1.67
ACTB-208ENST00000464611 FAT3Q8TDW7 4589 aa4.6□□□□□ -1.67
ACTB-208ENST00000464611 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.67
ACTB-208ENST00000464611 C9orf92A6NGG3 77 aa4.57□□□□□ -1.68
ACTB-208ENST00000464611 KRTAP10-8P60410 259 aa4.57□□□□□ -1.68
ACTB-208ENST00000464611 COX6B2Q6YFQ2 88 aa4.57□□□□□ -1.68
ACTB-208ENST00000464611 TNXBP22105 4242 aa4.55□□□□□ -1.68
ACTB-208ENST00000464611 MT1HL1P0DM35 61 aa4.55□□□□□ -1.68
ACTB-208ENST00000464611 MYCBP2O75592 4640 aa4.55□□□□□ -1.68
ACTB-208ENST00000464611 FLG2Q5D862 2391 aaPredicted RBP4.54□□□□□ -1.68
ACTB-208ENST00000464611 LRP1Q07954 4544 aaKnown RBP4.54□□□□□ -1.68
ACTB-208ENST00000464611 A0A1B0GU33 70 aa4.51□□□□□ -1.69
ACTB-208ENST00000464611 RPL37P61927 97 aaKnown RBP4.5□□□□□ -1.69
ACTB-208ENST00000464611 KRTAP3-1Q9BYR8 98 aa4.5□□□□□ -1.69
ACTB-208ENST00000464611 RBM12B-AS1Q9P1G2 102 aa4.49□□□□□ -1.69
ACTB-208ENST00000464611 K7ERS5 55 aa4.47□□□□□ -1.69
ACTB-208ENST00000464611 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
ACTB-208ENST00000464611 DMBT1Q9UGM3 2413 aaPredicted RBP4.46□□□□□ -1.7
ACTB-208ENST00000464611 H0YAA0 97 aa4.4□□□□□ -1.71
ACTB-208ENST00000464611 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
ACTB-208ENST00000464611 S4R3F8 94 aa4.38□□□□□ -1.71
ACTB-208ENST00000464611 HERC1Q15751 4861 aa4.34□□□□□ -1.72
ACTB-208ENST00000464611 LINC01554Q52M75 96 aa4.33□□□□□ -1.72
ACTB-208ENST00000464611 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
ACTB-208ENST00000464611 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
ACTB-208ENST00000464611 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
ACTB-208ENST00000464611 CSAG1Q6PB30 78 aa4.3□□□□□ -1.72
ACTB-208ENST00000464611 H3BS24 57 aa4.28□□□□□ -1.72
ACTB-208ENST00000464611 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
ACTB-208ENST00000464611 M0QZ58 72 aa4.26□□□□□ -1.73
ACTB-208ENST00000464611 ROMO1P60602 79 aa4.26□□□□□ -1.73
ACTB-208ENST00000464611 SEC61BP60468 96 aaKnown RBP4.25□□□□□ -1.73
ACTB-208ENST00000464611 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
ACTB-208ENST00000464611 LPAP08519 4548 aa4.24□□□□□ -1.73
ACTB-208ENST00000464611 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
ACTB-208ENST00000464611 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
ACTB-208ENST00000464611 LRP2P98164 4655 aa4.17□□□□□ -1.74
ACTB-208ENST00000464611 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
ACTB-208ENST00000464611 P0C880 135 aa4.16□□□□□ -1.74
ACTB-208ENST00000464611 KRTAP13-4Q3LI77 160 aa4.16□□□□□ -1.74
ACTB-208ENST00000464611 A0A0D9SG42 100 aa4.14□□□□□ -1.75
ACTB-208ENST00000464611 CRIPTQ9P021 101 aa4.12□□□□□ -1.75
ACTB-208ENST00000464611 KRTAP12-1P59990 96 aa4.1□□□□□ -1.75
ACTB-208ENST00000464611 RNF213Q63HN8 5207 aa4.09□□□□□ -1.76
ACTB-208ENST00000464611 SPINT4Q6UDR6 99 aa4.07□□□□□ -1.76
ACTB-208ENST00000464611 R4GN34 69 aa4.07□□□□□ -1.76
ACTB-208ENST00000464611 KRTAP12-2P59991 146 aa4.06□□□□□ -1.76
ACTB-208ENST00000464611 KRTAP4-1Q9BYQ7 146 aa4.02□□□□□ -1.77
ACTB-208ENST00000464611 MUC2Q02817 5179 aa4□□□□□ -1.77
ACTB-208ENST00000464611 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
ACTB-208ENST00000464611 KRTAP19-2Q3LHN2 52 aa3.93□□□□□ -1.78
ACTB-208ENST00000464611 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
ACTB-208ENST00000464611 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
ACTB-208ENST00000464611 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
ACTB-208ENST00000464611 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
ACTB-208ENST00000464611 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
ACTB-208ENST00000464611 MT1HP80294 61 aa3.86□□□□□ -1.79
ACTB-208ENST00000464611 CAMK2N1Q7Z7J9 78 aa3.86□□□□□ -1.79
ACTB-208ENST00000464611 M0R2T5 61 aa3.85□□□□□ -1.79
ACTB-208ENST00000464611 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
ACTB-208ENST00000464611 FLGP20930 4061 aaPredicted RBP3.81□□□□□ -1.8
ACTB-208ENST00000464611 TNP1P09430 55 aa3.76□□□□□ -1.81
ACTB-208ENST00000464611 PLAC4Q8WY50 150 aa3.75□□□□□ -1.81
ACTB-208ENST00000464611 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
ACTB-208ENST00000464611 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
ACTB-208ENST00000464611 MT2AP02795 61 aa3.65□□□□□ -1.83
ACTB-208ENST00000464611 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
ACTB-208ENST00000464611 KRTAP10-10P60014 251 aa3.63□□□□□ -1.83
ACTB-208ENST00000464611 MT1FP04733 61 aa3.62□□□□□ -1.83
ACTB-208ENST00000464611 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
ACTB-208ENST00000464611 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
ACTB-208ENST00000464611 KRTAP19-8Q3LI54 63 aa3.58□□□□□ -1.84
ACTB-208ENST00000464611 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
ACTB-208ENST00000464611 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms