RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 MT2AP02795 61 aa8.36□□□□□ -1.07
LST1-220ENST00000464526 KRTAP9-2Q9BYQ4 174 aa8.36□□□□□ -1.07
LST1-220ENST00000464526 MT1FP04733 61 aa8.33□□□□□ -1.08
LST1-220ENST00000464526 DMAC1Q96GE9 116 aa8.33□□□□□ -1.08
LST1-220ENST00000464526 A8MUN3 132 aa8.29□□□□□ -1.08
LST1-220ENST00000464526 CCDC179H3BU77 68 aa8.28□□□□□ -1.08
LST1-220ENST00000464526 KRTAP9-6A0A140TA67 174 aa8.26□□□□□ -1.09
LST1-220ENST00000464526 H7BZZ5 65 aa8.22□□□□□ -1.09
LST1-220ENST00000464526 CSAG1Q6PB30 78 aa8.22□□□□□ -1.09
LST1-220ENST00000464526 RPS28P62857 69 aaKnown RBP8.21□□□□□ -1.1
LST1-220ENST00000464526 KRTAP10-10P60014 251 aa8.19□□□□□ -1.1
LST1-220ENST00000464526 SPANXA2-OT1Q8N9U9 137 aa8.18□□□□□ -1.1
LST1-220ENST00000464526 FSIP2Q5CZC0 6907 aa8.17□□□□□ -1.1
LST1-220ENST00000464526 NDUFC1O43677 76 aa8.16□□□□□ -1.1
LST1-220ENST00000464526 LCE2DQ5TA82 110 aaPredicted RBP8.13□□□□□ -1.11
LST1-220ENST00000464526 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
LST1-220ENST00000464526 ACYP2P14621 99 aa8.13□□□□□ -1.11
LST1-220ENST00000464526 USH2AO75445 5202 aa8.09□□□□□ -1.11
LST1-220ENST00000464526 LCE2BO14633 110 aa8.05□□□□□ -1.12
LST1-220ENST00000464526 SEC61GP60059 68 aa8.02□□□□□ -1.13
LST1-220ENST00000464526 COA5Q86WW8 74 aa8.02□□□□□ -1.13
LST1-220ENST00000464526 PRO0628Q9UI54 55 aa8.01□□□□□ -1.13
LST1-220ENST00000464526 CHKB-CPT1BH3BT56 60 aa8□□□□□ -1.13
LST1-220ENST00000464526 ADM2Q7Z4H4 148 aa7.99□□□□□ -1.13
LST1-220ENST00000464526 KRTAP19-1Q8IUB9 90 aa7.97□□□□□ -1.13
LST1-220ENST00000464526 H0YAA0 97 aa7.96□□□□□ -1.14
LST1-220ENST00000464526 KRTAP3-2Q9BYR7 98 aa7.96□□□□□ -1.14
LST1-220ENST00000464526 SSPOA2VEC9 5147 aa7.96□□□□□ -1.14
LST1-220ENST00000464526 P0C880 135 aa7.95□□□□□ -1.14
LST1-220ENST00000464526 TMEM258P61165 79 aa7.93□□□□□ -1.14
LST1-220ENST00000464526 V9GYY9 64 aa7.9□□□□□ -1.14
LST1-220ENST00000464526 SPRR2GQ9BYE4 73 aa7.85□□□□□ -1.15
LST1-220ENST00000464526 SPTSSBQ8NFR3 76 aa7.85□□□□□ -1.15
LST1-220ENST00000464526 ATP5EP56381 51 aaPredicted RBP7.8□□□□□ -1.16
LST1-220ENST00000464526 CRCT1Q9UGL9 99 aa7.8□□□□□ -1.16
LST1-220ENST00000464526 MT1BP07438 61 aa7.76□□□□□ -1.17
LST1-220ENST00000464526 CRIPTQ9P021 101 aa7.74□□□□□ -1.17
LST1-220ENST00000464526 KRTAP19-8Q3LI54 63 aa7.73□□□□□ -1.17
LST1-220ENST00000464526 M0QZ58 72 aa7.7□□□□□ -1.18
LST1-220ENST00000464526 R4GN34 69 aa7.68□□□□□ -1.18
LST1-220ENST00000464526 SERP1Q9Y6X1 66 aa7.68□□□□□ -1.18
LST1-220ENST00000464526 KRTAP13-4Q3LI77 160 aa7.67□□□□□ -1.18
LST1-220ENST00000464526 FCGBPQ9Y6R7 5405 aaPredicted RBP7.65□□□□□ -1.18
LST1-220ENST00000464526 Q5VV11 94 aa7.64□□□□□ -1.19
LST1-220ENST00000464526 SMIM26A0A096LP01 95 aa7.63□□□□□ -1.19
LST1-220ENST00000464526 LINC01554Q52M75 96 aa7.61□□□□□ -1.19
LST1-220ENST00000464526 KRTAP19-6Q3LI70 58 aa7.59□□□□□ -1.19
LST1-220ENST00000464526 PMAIP1Q13794 54 aa7.55□□□□□ -1.2
LST1-220ENST00000464526 A0A1B0GU69 56 aa7.53□□□□□ -1.2
LST1-220ENST00000464526 SPATA8Q6RVD6 105 aa7.5□□□□□ -1.21
LST1-220ENST00000464526 BRK1Q8WUW1 75 aa7.49□□□□□ -1.21
LST1-220ENST00000464526 LINC01558Q9Y6Z2 57 aa7.49□□□□□ -1.21
LST1-220ENST00000464526 A0A1B0GU33 70 aa7.47□□□□□ -1.21
LST1-220ENST00000464526 MACF1Q9UPN3 7388 aaKnown RBP7.41□□□□□ -1.22
LST1-220ENST00000464526 A0A0D9SG42 100 aa7.41□□□□□ -1.22
LST1-220ENST00000464526 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
LST1-220ENST00000464526 A6NN06 94 aa7.38□□□□□ -1.23
LST1-220ENST00000464526 MT1XP80297 61 aa7.38□□□□□ -1.23
LST1-220ENST00000464526 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
LST1-220ENST00000464526 PRR15LQ9BU68 103 aa7.38□□□□□ -1.23
LST1-220ENST00000464526 KRTAP9-7A8MTY7 169 aa7.37□□□□□ -1.23
LST1-220ENST00000464526 A8MU10 97 aa7.35□□□□□ -1.23
LST1-220ENST00000464526 PSPHP1O15172 72 aa7.31□□□□□ -1.24
LST1-220ENST00000464526 Q1T7F1 81 aa7.3□□□□□ -1.24
LST1-220ENST00000464526 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.29□□□□□ -1.24
LST1-220ENST00000464526 SYNE2Q8WXH0 6885 aaKnown RBP7.29□□□□□ -1.24
LST1-220ENST00000464526 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
LST1-220ENST00000464526 KRTAP12-2P59991 146 aa7.25□□□□□ -1.25
LST1-220ENST00000464526 KTN1-AS1Q86SY8 53 aa7.25□□□□□ -1.25
LST1-220ENST00000464526 KMT2DO14686 5537 aa7.22□□□□□ -1.25
LST1-220ENST00000464526 SPINT4Q6UDR6 99 aa7.21□□□□□ -1.26
LST1-220ENST00000464526 UQCR11O14957 56 aa7.17□□□□□ -1.26
LST1-220ENST00000464526 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
LST1-220ENST00000464526 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
LST1-220ENST00000464526 H3BS24 57 aa7.09□□□□□ -1.27
LST1-220ENST00000464526 KRTAP10-7P60409 375 aaPredicted RBP7.09□□□□□ -1.27
LST1-220ENST00000464526 MIR22HGQ0VDD5 57 aa7.09□□□□□ -1.27
LST1-220ENST00000464526 A6NED7 52 aa7.01□□□□□ -1.29
LST1-220ENST00000464526 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
LST1-220ENST00000464526 KRTAP4-8Q9BYQ9 185 aa6.98□□□□□ -1.29
LST1-220ENST00000464526 KRTAP10-12P60413 245 aa6.96□□□□□ -1.3
LST1-220ENST00000464526 C10orf95Q9H7T3 257 aa6.92□□□□□ -1.3
LST1-220ENST00000464526 MUC12Q9UKN1 5478 aa6.9□□□□□ -1.3
LST1-220ENST00000464526 KRTAP6-3Q3LI67 103 aa6.86□□□□□ -1.31
LST1-220ENST00000464526 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
LST1-220ENST00000464526 KRTAP8-1Q8IUC2 63 aa6.8□□□□□ -1.32
LST1-220ENST00000464526 KRTAP5-9P26371 169 aa6.78□□□□□ -1.32
LST1-220ENST00000464526 MDN1Q9NU22 5596 aa6.77□□□□□ -1.33
LST1-220ENST00000464526 K7ERS5 55 aa6.72□□□□□ -1.33
LST1-220ENST00000464526 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
LST1-220ENST00000464526 NEBP20929 6669 aa6.71□□□□□ -1.34
LST1-220ENST00000464526 LOC100996750A0A140TA64 210 aa6.68□□□□□ -1.34
LST1-220ENST00000464526 KRTAP4-6Q9BYQ5 205 aa6.68□□□□□ -1.34
LST1-220ENST00000464526 TNP1P09430 55 aa6.66□□□□□ -1.34
LST1-220ENST00000464526 LCE3AQ5TA76 89 aa6.64□□□□□ -1.35
LST1-220ENST00000464526 KRTAP19-7Q3SYF9 63 aa6.61□□□□□ -1.35
LST1-220ENST00000464526 PRAC1Q96KF2 57 aa6.56□□□□□ -1.36
LST1-220ENST00000464526 KRTAP19-5Q3LI72 72 aa6.54□□□□□ -1.36
LST1-220ENST00000464526 LCE1AQ5T7P2 110 aa6.5□□□□□ -1.37
LST1-220ENST00000464526 MT1EP04732 61 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms