RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 RPL37P61927 97 aaKnown RBP10.66□□□□□ -0.7
TUBGCP3-204ENST00000464139 KTN1-AS1Q86SY8 53 aa10.59□□□□□ -0.71
TUBGCP3-204ENST00000464139 KRTAP4-5Q9BYR2 181 aa10.5□□□□□ -0.73
TUBGCP3-204ENST00000464139 ABCA13Q86UQ4 5058 aa10.47□□□□□ -0.73
TUBGCP3-204ENST00000464139 H0YAA0 97 aa10.43□□□□□ -0.74
TUBGCP3-204ENST00000464139 A0A1B0GU33 70 aa10.43□□□□□ -0.74
TUBGCP3-204ENST00000464139 H1FX-AS1Q4G0G2 97 aa10.4□□□□□ -0.75
TUBGCP3-204ENST00000464139 KRTAP3-3Q9BYR6 98 aa10.4□□□□□ -0.75
TUBGCP3-204ENST00000464139 LRP2P98164 4655 aa10.39□□□□□ -0.75
TUBGCP3-204ENST00000464139 LPAP08519 4548 aa10.38□□□□□ -0.75
TUBGCP3-204ENST00000464139 TPRXLQ17RH7 258 aa10.32□□□□□ -0.76
TUBGCP3-204ENST00000464139 S4R3F8 94 aa10.32□□□□□ -0.76
TUBGCP3-204ENST00000464139 HERC2O95714 4834 aa10.3□□□□□ -0.76
TUBGCP3-204ENST00000464139 ADM2Q7Z4H4 148 aa10.3□□□□□ -0.76
TUBGCP3-204ENST00000464139 PRAC1Q96KF2 57 aa10.28□□□□□ -0.76
TUBGCP3-204ENST00000464139 RBM12B-AS1Q9P1G2 102 aa10.26□□□□□ -0.77
TUBGCP3-204ENST00000464139 KRTAP10-6P60371 365 aaPredicted RBP10.23□□□□□ -0.77
TUBGCP3-204ENST00000464139 BIRC6Q9NR09 4857 aa10.21□□□□□ -0.78
TUBGCP3-204ENST00000464139 KRTAP3-2Q9BYR7 98 aa10.18□□□□□ -0.78
TUBGCP3-204ENST00000464139 KRTAP13-4Q3LI77 160 aa10.1□□□□□ -0.79
TUBGCP3-204ENST00000464139 P0C880 135 aa10.09□□□□□ -0.79
TUBGCP3-204ENST00000464139 J3QL48 77 aa10.05□□□□□ -0.8
TUBGCP3-204ENST00000464139 A0A0D9SG42 100 aa10.01□□□□□ -0.81
TUBGCP3-204ENST00000464139 PCLOQ9Y6V0 5065 aa9.99□□□□□ -0.81
TUBGCP3-204ENST00000464139 CSAG1Q6PB30 78 aa9.99□□□□□ -0.81
TUBGCP3-204ENST00000464139 K7ERS5 55 aa9.98□□□□□ -0.81
TUBGCP3-204ENST00000464139 SEC61BP60468 96 aaKnown RBP9.95□□□□□ -0.82
TUBGCP3-204ENST00000464139 MUC17Q685J3 4493 aa9.93□□□□□ -0.82
TUBGCP3-204ENST00000464139 HERC1Q15751 4861 aa9.91□□□□□ -0.82
TUBGCP3-204ENST00000464139 KRTAP4-1Q9BYQ7 146 aa9.89□□□□□ -0.83
TUBGCP3-204ENST00000464139 MUC2Q02817 5179 aa9.8□□□□□ -0.84
TUBGCP3-204ENST00000464139 LINC01554Q52M75 96 aa9.78□□□□□ -0.84
TUBGCP3-204ENST00000464139 CRIPTQ9P021 101 aa9.76□□□□□ -0.85
TUBGCP3-204ENST00000464139 KRTAP12-2P59991 146 aa9.75□□□□□ -0.85
TUBGCP3-204ENST00000464139 ROMO1P60602 79 aa9.74□□□□□ -0.85
TUBGCP3-204ENST00000464139 KRTAP25-1Q3LHN0 102 aa9.73□□□□□ -0.85
TUBGCP3-204ENST00000464139 M0QZ58 72 aa9.7□□□□□ -0.86
TUBGCP3-204ENST00000464139 SPINT4Q6UDR6 99 aa9.69□□□□□ -0.86
TUBGCP3-204ENST00000464139 KRTAP12-1P59990 96 aa9.68□□□□□ -0.86
TUBGCP3-204ENST00000464139 HMCN2Q8NDA2 5059 aa9.68□□□□□ -0.86
TUBGCP3-204ENST00000464139 KRTAP19-2Q3LHN2 52 aa9.64□□□□□ -0.87
TUBGCP3-204ENST00000464139 R4GN34 69 aa9.57□□□□□ -0.88
TUBGCP3-204ENST00000464139 H3BS24 57 aa9.56□□□□□ -0.88
TUBGCP3-204ENST00000464139 LORP23490 312 aaPredicted RBP9.56□□□□□ -0.88
TUBGCP3-204ENST00000464139 FLGP20930 4061 aaPredicted RBP9.47□□□□□ -0.89
TUBGCP3-204ENST00000464139 C10orf95Q9H7T3 257 aa9.44□□□□□ -0.9
TUBGCP3-204ENST00000464139 UBR4Q5T4S7 5183 aa9.38□□□□□ -0.91
TUBGCP3-204ENST00000464139 FAT4Q6V0I7 4981 aa9.36□□□□□ -0.91
TUBGCP3-204ENST00000464139 RNF213Q63HN8 5207 aa9.36□□□□□ -0.91
TUBGCP3-204ENST00000464139 LCE2CQ5TA81 110 aa9.17□□□□□ -0.94
TUBGCP3-204ENST00000464139 CAMK2N1Q7Z7J9 78 aa9.06□□□□□ -0.96
TUBGCP3-204ENST00000464139 M0R2T5 61 aa8.97□□□□□ -0.97
TUBGCP3-204ENST00000464139 MT1HP80294 61 aa8.94□□□□□ -0.98
TUBGCP3-204ENST00000464139 KRTAP19-1Q8IUB9 90 aa8.81□□□□□ -1
TUBGCP3-204ENST00000464139 SPRR2GQ9BYE4 73 aa8.81□□□□□ -1
TUBGCP3-204ENST00000464139 KRTAP15-1Q3LI76 137 aa8.8□□□□□ -1
TUBGCP3-204ENST00000464139 MT2AP02795 61 aa8.74□□□□□ -1.01
TUBGCP3-204ENST00000464139 MT1FP04733 61 aa8.74□□□□□ -1.01
TUBGCP3-204ENST00000464139 KRTAP10-10P60014 251 aa8.73□□□□□ -1.01
TUBGCP3-204ENST00000464139 KRTAP9-8Q9BYQ0 159 aa8.7□□□□□ -1.02
TUBGCP3-204ENST00000464139 PLAC4Q8WY50 150 aa8.7□□□□□ -1.02
TUBGCP3-204ENST00000464139 PP632Q6XCG6 107 aa8.67□□□□□ -1.02
TUBGCP3-204ENST00000464139 TNP1P09430 55 aa8.66□□□□□ -1.02
TUBGCP3-204ENST00000464139 NDUFAF8A1L188 74 aa8.52□□□□□ -1.05
TUBGCP3-204ENST00000464139 KRTAP19-8Q3LI54 63 aa8.45□□□□□ -1.06
TUBGCP3-204ENST00000464139 KRTAP23-1A1A580 65 aa8.43□□□□□ -1.06
TUBGCP3-204ENST00000464139 MT1BP07438 61 aa8.39□□□□□ -1.07
TUBGCP3-204ENST00000464139 KRTAP9-3Q9BYQ3 159 aa8.35□□□□□ -1.07
TUBGCP3-204ENST00000464139 KRTAP10-5P60370 271 aa8.28□□□□□ -1.08
TUBGCP3-204ENST00000464139 LCE3AQ5TA76 89 aa8.28□□□□□ -1.08
TUBGCP3-204ENST00000464139 MT1XP80297 61 aa8.27□□□□□ -1.09
TUBGCP3-204ENST00000464139 LCE2AQ5TA79 106 aaPredicted RBP8.21□□□□□ -1.1
TUBGCP3-204ENST00000464139 USH2AO75445 5202 aa8.17□□□□□ -1.1
TUBGCP3-204ENST00000464139 LUZP6Q538Z0 58 aa8.08□□□□□ -1.12
TUBGCP3-204ENST00000464139 LCE2BO14633 110 aa8.07□□□□□ -1.12
TUBGCP3-204ENST00000464139 KRTAP10-7P60409 375 aaPredicted RBP8.04□□□□□ -1.12
TUBGCP3-204ENST00000464139 KRTAP8-1Q8IUC2 63 aa8.03□□□□□ -1.12
TUBGCP3-204ENST00000464139 KRTAP10-12P60413 245 aa8.02□□□□□ -1.13
TUBGCP3-204ENST00000464139 A0A0A0MQY5 61 aa8.01□□□□□ -1.13
TUBGCP3-204ENST00000464139 SPRR5A0A1B0GTR4 108 aa8□□□□□ -1.13
TUBGCP3-204ENST00000464139 PRO2289Q9P1D8 64 aa7.97□□□□□ -1.13
TUBGCP3-204ENST00000464139 KRTAP12-3P60328 96 aa7.88□□□□□ -1.15
TUBGCP3-204ENST00000464139 FSIP2Q5CZC0 6907 aa7.79□□□□□ -1.16
TUBGCP3-204ENST00000464139 KMT2DO14686 5537 aa7.74□□□□□ -1.17
TUBGCP3-204ENST00000464139 KRTAP19-5Q3LI72 72 aa7.66□□□□□ -1.18
TUBGCP3-204ENST00000464139 SSPOA2VEC9 5147 aa7.64□□□□□ -1.19
TUBGCP3-204ENST00000464139 KRTAP4-8A0A0G2JLE6 195 aa7.62□□□□□ -1.19
TUBGCP3-204ENST00000464139 KRTAP4-8Q9BYQ9 185 aa7.62□□□□□ -1.19
TUBGCP3-204ENST00000464139 LCE3CQ5T5A8 94 aa7.4□□□□□ -1.23
TUBGCP3-204ENST00000464139 KRTAP19-7Q3SYF9 63 aa7.37□□□□□ -1.23
TUBGCP3-204ENST00000464139 KRTAP19-6Q3LI70 58 aa7.29□□□□□ -1.24
TUBGCP3-204ENST00000464139 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.26
TUBGCP3-204ENST00000464139 KRTAP4-7Q9BYR0 210 aa7.19□□□□□ -1.26
TUBGCP3-204ENST00000464139 LCE2DQ5TA82 110 aaPredicted RBP7.19□□□□□ -1.26
TUBGCP3-204ENST00000464139 MT1EP04732 61 aa7.17□□□□□ -1.26
TUBGCP3-204ENST00000464139 KRTAP9-6A8MVA2 160 aa7.14□□□□□ -1.27
TUBGCP3-204ENST00000464139 MT1LQ93083 61 aa7.13□□□□□ -1.27
TUBGCP3-204ENST00000464139 KRTAP19-4Q3LI73 84 aa6.98□□□□□ -1.29
TUBGCP3-204ENST00000464139 MUC12Q9UKN1 5478 aa6.97□□□□□ -1.29
TUBGCP3-204ENST00000464139 MACF1Q9UPN3 7388 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms