RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 FAM236BA0A1B0GV22 79 aa5.9□□□□□ -1.46
XRN1-203ENST00000463916 J3QR89 54 aa5.9□□□□□ -1.46
XRN1-203ENST00000463916 ATOX1O00244 68 aa5.87□□□□□ -1.47
XRN1-203ENST00000463916 OCR1Q9BZK8 76 aa5.86□□□□□ -1.47
XRN1-203ENST00000463916 MACF1Q9UPN3 7388 aaKnown RBP5.84□□□□□ -1.47
XRN1-203ENST00000463916 KLKP1Q107X0 134 aa5.84□□□□□ -1.47
XRN1-203ENST00000463916 LINC00208Q96KT6 92 aa5.84□□□□□ -1.47
XRN1-203ENST00000463916 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.47
XRN1-203ENST00000463916 MT1BP07438 61 aa5.82□□□□□ -1.48
XRN1-203ENST00000463916 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
XRN1-203ENST00000463916 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
XRN1-203ENST00000463916 MP68P56378 58 aa5.77□□□□□ -1.49
XRN1-203ENST00000463916 NDUFC1O43677 76 aa5.76□□□□□ -1.49
XRN1-203ENST00000463916 Q5VV11 94 aa5.76□□□□□ -1.49
XRN1-203ENST00000463916 A8MUN3 132 aa5.75□□□□□ -1.49
XRN1-203ENST00000463916 ANAPC13Q9BS18 74 aa5.73□□□□□ -1.49
XRN1-203ENST00000463916 IMUPQ9GZP8 106 aa5.73□□□□□ -1.49
XRN1-203ENST00000463916 H0YAA0 97 aa5.7□□□□□ -1.5
XRN1-203ENST00000463916 CRIPTQ9P021 101 aa5.7□□□□□ -1.5
XRN1-203ENST00000463916 A6NN06 94 aa5.69□□□□□ -1.5
XRN1-203ENST00000463916 H3BPC8 53 aa5.68□□□□□ -1.5
XRN1-203ENST00000463916 ADM2Q7Z4H4 148 aa5.67□□□□□ -1.5
XRN1-203ENST00000463916 SMIM20Q8N5G0 67 aa5.67□□□□□ -1.5
XRN1-203ENST00000463916 MT-ATP8P03928 68 aa5.67□□□□□ -1.5
XRN1-203ENST00000463916 KRTAP10-5P60370 271 aa5.65□□□□□ -1.51
XRN1-203ENST00000463916 DMAC1Q96GE9 116 aa5.63□□□□□ -1.51
XRN1-203ENST00000463916 KRTAP6-3Q3LI67 103 aa5.62□□□□□ -1.51
XRN1-203ENST00000463916 P0C880 135 aa5.58□□□□□ -1.52
XRN1-203ENST00000463916 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
XRN1-203ENST00000463916 CCDC179H3BU77 68 aa5.57□□□□□ -1.52
XRN1-203ENST00000463916 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
XRN1-203ENST00000463916 TRAV7A0A075B6U4 112 aa5.56□□□□□ -1.52
XRN1-203ENST00000463916 R4GN34 69 aa5.5□□□□□ -1.53
XRN1-203ENST00000463916 ACYP2P14621 99 aa5.49□□□□□ -1.53
XRN1-203ENST00000463916 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
XRN1-203ENST00000463916 SNURFQ9Y675 71 aa5.48□□□□□ -1.53
XRN1-203ENST00000463916 M0QZ58 72 aa5.47□□□□□ -1.53
XRN1-203ENST00000463916 C20orf197Q8N268 126 aa5.47□□□□□ -1.53
XRN1-203ENST00000463916 MUC12Q9UKN1 5478 aa5.47□□□□□ -1.53
XRN1-203ENST00000463916 MT1XP80297 61 aa5.46□□□□□ -1.53
XRN1-203ENST00000463916 PLAC4Q8WY50 150 aa5.44□□□□□ -1.54
XRN1-203ENST00000463916 KMT2DO14686 5537 aa5.43□□□□□ -1.54
XRN1-203ENST00000463916 KRTAP5-9P26371 169 aa5.4□□□□□ -1.54
XRN1-203ENST00000463916 LINC01554Q52M75 96 aa5.4□□□□□ -1.54
XRN1-203ENST00000463916 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
XRN1-203ENST00000463916 SERP2Q8N6R1 65 aa5.39□□□□□ -1.55
XRN1-203ENST00000463916 NEBP20929 6669 aa5.38□□□□□ -1.55
XRN1-203ENST00000463916 COX7CP15954 63 aa5.38□□□□□ -1.55
XRN1-203ENST00000463916 TMEM258P61165 79 aa5.38□□□□□ -1.55
XRN1-203ENST00000463916 CHKB-CPT1BH3BT56 60 aa5.37□□□□□ -1.55
XRN1-203ENST00000463916 SPTSSBQ8NFR3 76 aa5.37□□□□□ -1.55
XRN1-203ENST00000463916 SPANXA2-OT1Q8N9U9 137 aa5.36□□□□□ -1.55
XRN1-203ENST00000463916 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
XRN1-203ENST00000463916 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
XRN1-203ENST00000463916 KRTAP12-2P59991 146 aa5.28□□□□□ -1.56
XRN1-203ENST00000463916 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
XRN1-203ENST00000463916 KRTAP4-8A0A0G2JLE6 195 aa5.25□□□□□ -1.57
XRN1-203ENST00000463916 KRTAP4-8Q9BYQ9 185 aa5.25□□□□□ -1.57
XRN1-203ENST00000463916 KRTAP13-4Q3LI77 160 aa5.24□□□□□ -1.57
XRN1-203ENST00000463916 KRTAP8-1Q8IUC2 63 aa5.24□□□□□ -1.57
XRN1-203ENST00000463916 COA5Q86WW8 74 aa5.23□□□□□ -1.57
XRN1-203ENST00000463916 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
XRN1-203ENST00000463916 CYSTM1Q9H1C7 97 aa5.22□□□□□ -1.57
XRN1-203ENST00000463916 SEC61GP60059 68 aa5.22□□□□□ -1.57
XRN1-203ENST00000463916 SERP1Q9Y6X1 66 aa5.21□□□□□ -1.58
XRN1-203ENST00000463916 V9GYY9 64 aa5.21□□□□□ -1.58
XRN1-203ENST00000463916 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
XRN1-203ENST00000463916 SMIM26A0A096LP01 95 aa5.17□□□□□ -1.58
XRN1-203ENST00000463916 H7BZZ5 65 aa5.17□□□□□ -1.58
XRN1-203ENST00000463916 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
XRN1-203ENST00000463916 SPRR2EP22531 72 aa5.16□□□□□ -1.58
XRN1-203ENST00000463916 SPRR2BP35325 72 aa5.16□□□□□ -1.58
XRN1-203ENST00000463916 SPRR2AP35326 72 aa5.16□□□□□ -1.58
XRN1-203ENST00000463916 ATP5EP56381 51 aaPredicted RBP5.12□□□□□ -1.59
XRN1-203ENST00000463916 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
XRN1-203ENST00000463916 BRK1Q8WUW1 75 aa5.08□□□□□ -1.6
XRN1-203ENST00000463916 SPATA8Q6RVD6 105 aa5.06□□□□□ -1.6
XRN1-203ENST00000463916 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
XRN1-203ENST00000463916 CAMK2N1Q7Z7J9 78 aa5.06□□□□□ -1.6
XRN1-203ENST00000463916 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
XRN1-203ENST00000463916 A0A0D9SG42 100 aa5.05□□□□□ -1.6
XRN1-203ENST00000463916 A0A1B0GU33 70 aa5.03□□□□□ -1.6
XRN1-203ENST00000463916 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
XRN1-203ENST00000463916 SPRR2DP22532 72 aa4.98□□□□□ -1.61
XRN1-203ENST00000463916 KRTAP12-1P59990 96 aa4.96□□□□□ -1.62
XRN1-203ENST00000463916 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.62
XRN1-203ENST00000463916 A0A1B0GU69 56 aa4.94□□□□□ -1.62
XRN1-203ENST00000463916 Q1T7F1 81 aa4.9□□□□□ -1.62
XRN1-203ENST00000463916 KRTAP2-2Q9BYT5 123 aa4.9□□□□□ -1.62
XRN1-203ENST00000463916 KRTAP2-1Q9BYU5 128 aa4.9□□□□□ -1.62
XRN1-203ENST00000463916 A8MU10 97 aa4.89□□□□□ -1.63
XRN1-203ENST00000463916 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
XRN1-203ENST00000463916 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
XRN1-203ENST00000463916 MT1EP04732 61 aa4.83□□□□□ -1.64
XRN1-203ENST00000463916 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
XRN1-203ENST00000463916 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
XRN1-203ENST00000463916 LINC01558Q9Y6Z2 57 aa4.77□□□□□ -1.65
XRN1-203ENST00000463916 PSPHP1O15172 72 aa4.77□□□□□ -1.65
XRN1-203ENST00000463916 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
XRN1-203ENST00000463916 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms