RNA–Protein interactions for RNA: ENST00000463717.5

GCOM1-204, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-204ENST00000463717 A8MU10 97 aa10.38□□□□□ -0.75
GCOM1-204ENST00000463717 BIRC6Q9NR09 4857 aa10.33□□□□□ -0.76
GCOM1-204ENST00000463717 HERC2O95714 4834 aa10.31□□□□□ -0.76
GCOM1-204ENST00000463717 SPATA8Q6RVD6 105 aa10.31□□□□□ -0.76
GCOM1-204ENST00000463717 S4R3F8 94 aa10.31□□□□□ -0.76
GCOM1-204ENST00000463717 ABCA13Q86UQ4 5058 aa10.28□□□□□ -0.76
GCOM1-204ENST00000463717 SEC61BP60468 96 aaKnown RBP10.28□□□□□ -0.76
GCOM1-204ENST00000463717 MIR22HGQ0VDD5 57 aa10.28□□□□□ -0.76
GCOM1-204ENST00000463717 RBM12B-AS1Q9P1G2 102 aa10.28□□□□□ -0.76
GCOM1-204ENST00000463717 H1FX-AS1Q4G0G2 97 aa10.27□□□□□ -0.77
GCOM1-204ENST00000463717 PMAIP1Q13794 54 aa10.22□□□□□ -0.77
GCOM1-204ENST00000463717 KRTAP3-3Q9BYR6 98 aa10.22□□□□□ -0.77
GCOM1-204ENST00000463717 LRP2P98164 4655 aa10.21□□□□□ -0.77
GCOM1-204ENST00000463717 A0A1B0GU33 70 aa10.15□□□□□ -0.78
GCOM1-204ENST00000463717 LPAP08519 4548 aa10.14□□□□□ -0.79
GCOM1-204ENST00000463717 A6NN06 94 aa10.12□□□□□ -0.79
GCOM1-204ENST00000463717 H0YAA0 97 aa10.05□□□□□ -0.8
GCOM1-204ENST00000463717 CSAG1Q6PB30 78 aa10□□□□□ -0.81
GCOM1-204ENST00000463717 MUC17Q685J3 4493 aa10□□□□□ -0.81
GCOM1-204ENST00000463717 KRTAP10-6P60371 365 aaPredicted RBP9.99□□□□□ -0.81
GCOM1-204ENST00000463717 KTN1-AS1Q86SY8 53 aa9.97□□□□□ -0.81
GCOM1-204ENST00000463717 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.81
GCOM1-204ENST00000463717 KRTAP4-1Q9BYQ7 146 aa9.9□□□□□ -0.82
GCOM1-204ENST00000463717 ADM2Q7Z4H4 148 aa9.87□□□□□ -0.83
GCOM1-204ENST00000463717 P0C880 135 aa9.83□□□□□ -0.84
GCOM1-204ENST00000463717 K7ERS5 55 aa9.81□□□□□ -0.84
GCOM1-204ENST00000463717 PCLOQ9Y6V0 5065 aa9.76□□□□□ -0.85
GCOM1-204ENST00000463717 KRTAP19-2Q3LHN2 52 aa9.75□□□□□ -0.85
GCOM1-204ENST00000463717 KRTAP13-4Q3LI77 160 aa9.75□□□□□ -0.85
GCOM1-204ENST00000463717 M0QZ58 72 aa9.7□□□□□ -0.86
GCOM1-204ENST00000463717 HERC1Q15751 4861 aa9.67□□□□□ -0.86
GCOM1-204ENST00000463717 HMCN2Q8NDA2 5059 aa9.67□□□□□ -0.86
GCOM1-204ENST00000463717 A0A0D9SG42 100 aa9.62□□□□□ -0.87
GCOM1-204ENST00000463717 FLGP20930 4061 aaPredicted RBP9.53□□□□□ -0.88
GCOM1-204ENST00000463717 R4GN34 69 aa9.5□□□□□ -0.89
GCOM1-204ENST00000463717 PRAC1Q96KF2 57 aa9.49□□□□□ -0.89
GCOM1-204ENST00000463717 KRTAP12-1P59990 96 aa9.45□□□□□ -0.9
GCOM1-204ENST00000463717 KRTAP12-2P59991 146 aa9.42□□□□□ -0.9
GCOM1-204ENST00000463717 ROMO1P60602 79 aa9.42□□□□□ -0.9
GCOM1-204ENST00000463717 SPINT4Q6UDR6 99 aa9.38□□□□□ -0.91
GCOM1-204ENST00000463717 LCE2CQ5TA81 110 aa9.34□□□□□ -0.91
GCOM1-204ENST00000463717 CRIPTQ9P021 101 aa9.32□□□□□ -0.92
GCOM1-204ENST00000463717 LORP23490 312 aaPredicted RBP9.31□□□□□ -0.92
GCOM1-204ENST00000463717 LINC01554Q52M75 96 aa9.29□□□□□ -0.92
GCOM1-204ENST00000463717 MUC2Q02817 5179 aa9.29□□□□□ -0.92
GCOM1-204ENST00000463717 KRTAP25-1Q3LHN0 102 aa9.24□□□□□ -0.93
GCOM1-204ENST00000463717 MT1HP80294 61 aa9.16□□□□□ -0.94
GCOM1-204ENST00000463717 RNF213Q63HN8 5207 aa9.15□□□□□ -0.94
GCOM1-204ENST00000463717 M0R2T5 61 aa9.13□□□□□ -0.95
GCOM1-204ENST00000463717 UBR4Q5T4S7 5183 aa9.05□□□□□ -0.96
GCOM1-204ENST00000463717 SPRR2GQ9BYE4 73 aa8.96□□□□□ -0.98
GCOM1-204ENST00000463717 CAMK2N1Q7Z7J9 78 aa8.95□□□□□ -0.98
GCOM1-204ENST00000463717 FAT4Q6V0I7 4981 aa8.94□□□□□ -0.98
GCOM1-204ENST00000463717 MT2AP02795 61 aa8.9□□□□□ -0.98
GCOM1-204ENST00000463717 C10orf95Q9H7T3 257 aa8.89□□□□□ -0.99
GCOM1-204ENST00000463717 KRTAP9-8Q9BYQ0 159 aa8.86□□□□□ -0.99
GCOM1-204ENST00000463717 MT1FP04733 61 aa8.85□□□□□ -0.99
GCOM1-204ENST00000463717 KRTAP10-10P60014 251 aa8.85□□□□□ -0.99
GCOM1-204ENST00000463717 KRTAP19-1Q8IUB9 90 aa8.85□□□□□ -0.99
GCOM1-204ENST00000463717 PLAC4Q8WY50 150 aa8.78□□□□□ -1
GCOM1-204ENST00000463717 KRTAP19-8Q3LI54 63 aa8.67□□□□□ -1.02
GCOM1-204ENST00000463717 PP632Q6XCG6 107 aa8.64□□□□□ -1.03
GCOM1-204ENST00000463717 TNP1P09430 55 aa8.61□□□□□ -1.03
GCOM1-204ENST00000463717 KRTAP9-3Q9BYQ3 159 aa8.53□□□□□ -1.04
GCOM1-204ENST00000463717 KRTAP23-1A1A580 65 aa8.53□□□□□ -1.04
GCOM1-204ENST00000463717 LCE2AQ5TA79 106 aaPredicted RBP8.49□□□□□ -1.05
GCOM1-204ENST00000463717 MT1BP07438 61 aa8.47□□□□□ -1.05
GCOM1-204ENST00000463717 MT1XP80297 61 aa8.3□□□□□ -1.08
GCOM1-204ENST00000463717 KRTAP10-5P60370 271 aa8.29□□□□□ -1.08
GCOM1-204ENST00000463717 KRTAP15-1Q3LI76 137 aa8.26□□□□□ -1.09
GCOM1-204ENST00000463717 PRO2289Q9P1D8 64 aa8.24□□□□□ -1.09
GCOM1-204ENST00000463717 LCE2BO14633 110 aa8.2□□□□□ -1.1
GCOM1-204ENST00000463717 LCE3AQ5TA76 89 aa8.11□□□□□ -1.11
GCOM1-204ENST00000463717 KRTAP10-12P60413 245 aa8.06□□□□□ -1.12
GCOM1-204ENST00000463717 KRTAP8-1Q8IUC2 63 aa8.01□□□□□ -1.13
GCOM1-204ENST00000463717 KRTAP10-7P60409 375 aaPredicted RBP7.96□□□□□ -1.13
GCOM1-204ENST00000463717 KRTAP12-3P60328 96 aa7.8□□□□□ -1.16
GCOM1-204ENST00000463717 USH2AO75445 5202 aa7.8□□□□□ -1.16
GCOM1-204ENST00000463717 NDUFAF8A1L188 74 aa7.79□□□□□ -1.16
GCOM1-204ENST00000463717 SPRR5A0A1B0GTR4 108 aa7.78□□□□□ -1.16
GCOM1-204ENST00000463717 LUZP6Q538Z0 58 aa7.74□□□□□ -1.17
GCOM1-204ENST00000463717 KRTAP19-6Q3LI70 58 aa7.66□□□□□ -1.18
GCOM1-204ENST00000463717 SSPOA2VEC9 5147 aa7.62□□□□□ -1.19
GCOM1-204ENST00000463717 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
GCOM1-204ENST00000463717 KRTAP19-5Q3LI72 72 aa7.58□□□□□ -1.2
GCOM1-204ENST00000463717 H3BS24 57 aa7.51□□□□□ -1.21
GCOM1-204ENST00000463717 KRTAP4-8A0A0G2JLE6 195 aa7.49□□□□□ -1.21
GCOM1-204ENST00000463717 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
GCOM1-204ENST00000463717 KRTAP19-7Q3SYF9 63 aa7.39□□□□□ -1.23
GCOM1-204ENST00000463717 KRTAP19-4Q3LI73 84 aa7.36□□□□□ -1.23
GCOM1-204ENST00000463717 LCE3CQ5T5A8 94 aa7.31□□□□□ -1.24
GCOM1-204ENST00000463717 KMT2DO14686 5537 aa7.29□□□□□ -1.24
GCOM1-204ENST00000463717 MT1EP04732 61 aa7.26□□□□□ -1.25
GCOM1-204ENST00000463717 MT1LQ93083 61 aa7.17□□□□□ -1.26
GCOM1-204ENST00000463717 FCGBPQ9Y6R7 5405 aaPredicted RBP7.09□□□□□ -1.27
GCOM1-204ENST00000463717 FSIP2Q5CZC0 6907 aa7.04□□□□□ -1.28
GCOM1-204ENST00000463717 A0A0A0MQY5 61 aa7.02□□□□□ -1.29
GCOM1-204ENST00000463717 KRTAP9-2Q9BYQ4 174 aa7.02□□□□□ -1.29
GCOM1-204ENST00000463717 KRTAP19-3Q7Z4W3 81 aa6.91□□□□□ -1.3
GCOM1-204ENST00000463717 KRTAP4-7Q9BYR0 210 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms