RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 DEFB109BQ30KR1 87 aa1.82□□□□□ -2.12
SGCE-209ENST00000462731 WFDC10BQ8IUB3 73 aa1.82□□□□□ -2.12
SGCE-209ENST00000462731 PRRC2CQ9Y520 2896 aaKnown RBP1.82□□□□□ -2.12
SGCE-209ENST00000462731 IGLV5-48A0A075B6I7 105 aa1.8□□□□□ -2.12
SGCE-209ENST00000462731 NSD1Q96L73 2696 aaPredicted RBP1.8□□□□□ -2.12
SGCE-209ENST00000462731 DNAH1Q9P2D7 4330 aa1.79□□□□□ -2.12
SGCE-209ENST00000462731 ZANQ9Y493 2812 aa1.79□□□□□ -2.12
SGCE-209ENST00000462731 S4R3F8 94 aa1.79□□□□□ -2.12
SGCE-209ENST00000462731 KAAG1Q9UBP8 84 aa1.78□□□□□ -2.12
SGCE-209ENST00000462731 SONP18583 2426 aaKnown RBP1.78□□□□□ -2.12
SGCE-209ENST00000462731 TENM3Q9P273 2699 aa1.77□□□□□ -2.13
SGCE-209ENST00000462731 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
SGCE-209ENST00000462731 MXRA5Q9NR99 2828 aa1.75□□□□□ -2.13
SGCE-209ENST00000462731 DEFB131AP59861 70 aa1.75□□□□□ -2.13
SGCE-209ENST00000462731 TRRAPQ9Y4A5 3859 aa1.75□□□□□ -2.13
SGCE-209ENST00000462731 FAT4Q6V0I7 4981 aa1.74□□□□□ -2.13
SGCE-209ENST00000462731 ANK3Q12955 4377 aaKnown RBP1.74□□□□□ -2.13
SGCE-209ENST00000462731 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
SGCE-209ENST00000462731 TENM2Q9NT68 2774 aa1.72□□□□□ -2.13
SGCE-209ENST00000462731 HECTD4Q9Y4D8 3996 aa1.71□□□□□ -2.14
SGCE-209ENST00000462731 MAP1AP78559 2803 aaPredicted RBP1.71□□□□□ -2.14
SGCE-209ENST00000462731 PRLHP81277 87 aa1.71□□□□□ -2.14
SGCE-209ENST00000462731 CMYA5Q8N3K9 4069 aa1.71□□□□□ -2.14
SGCE-209ENST00000462731 DEFB106AQ8N104 65 aa1.7□□□□□ -2.14
SGCE-209ENST00000462731 FRAS1Q86XX4 4008 aa1.69□□□□□ -2.14
SGCE-209ENST00000462731 MMP24-AS1A0A0U1RRL7 71 aa1.69□□□□□ -2.14
SGCE-209ENST00000462731 RNF213Q63HN8 5207 aa1.68□□□□□ -2.14
SGCE-209ENST00000462731 AKAP6Q13023 2319 aa1.68□□□□□ -2.14
SGCE-209ENST00000462731 TACC2O95359 2948 aa1.68□□□□□ -2.14
SGCE-209ENST00000462731 SPINK6Q6UWN8 80 aa1.68□□□□□ -2.14
SGCE-209ENST00000462731 LYSTQ99698 3801 aa1.65□□□□□ -2.14
SGCE-209ENST00000462731 SMR3AQ99954 134 aa1.65□□□□□ -2.15
SGCE-209ENST00000462731 HMCN2Q8NDA2 5059 aa1.65□□□□□ -2.15
SGCE-209ENST00000462731 CSMD3Q7Z407 3707 aa1.64□□□□□ -2.15
SGCE-209ENST00000462731 POLR2KP53803 58 aaKnown RBP1.64□□□□□ -2.15
SGCE-209ENST00000462731 NOP10Q9NPE3 64 aaKnown RBP1.64□□□□□ -2.15
SGCE-209ENST00000462731 COL7A1Q02388 2944 aa1.61□□□□□ -2.15
SGCE-209ENST00000462731 KMT2AQ03164 3969 aa1.6□□□□□ -2.15
SGCE-209ENST00000462731 PLECQ15149 4684 aaKnown RBP1.59□□□□□ -2.15
SGCE-209ENST00000462731 DNAH9Q9NYC9 4486 aa1.59□□□□□ -2.15
SGCE-209ENST00000462731 MYCBP2O75592 4640 aa1.59□□□□□ -2.16
SGCE-209ENST00000462731 DYNC1H1Q14204 4646 aaKnown RBP1.59□□□□□ -2.16
SGCE-209ENST00000462731 DEFB124Q8NES8 71 aa1.58□□□□□ -2.16
SGCE-209ENST00000462731 STAB2Q8WWQ8 2551 aa1.58□□□□□ -2.16
SGCE-209ENST00000462731 DNAH10Q8IVF4 4471 aa1.58□□□□□ -2.16
SGCE-209ENST00000462731 FSIP2Q5CZC0 6907 aa1.57□□□□□ -2.16
SGCE-209ENST00000462731 DMBT1Q9UGM3 2413 aaPredicted RBP1.57□□□□□ -2.16
SGCE-209ENST00000462731 SPINK1P00995 79 aa1.56□□□□□ -2.16
SGCE-209ENST00000462731 RPL39P62891 51 aaKnown RBP1.56□□□□□ -2.16
SGCE-209ENST00000462731 DEFB135Q30KP9 77 aa1.56□□□□□ -2.16
SGCE-209ENST00000462731 GPR98Q8WXG9 6306 aa1.55□□□□□ -2.16
SGCE-209ENST00000462731 H0YGG7 62 aa1.55□□□□□ -2.16
SGCE-209ENST00000462731 DNAH7Q8WXX0 4024 aa1.55□□□□□ -2.16
SGCE-209ENST00000462731 FAT2Q9NYQ8 4349 aa1.54□□□□□ -2.16
SGCE-209ENST00000462731 HSPG2P98160 4391 aa1.54□□□□□ -2.16
SGCE-209ENST00000462731 KRTAP19-3Q7Z4W3 81 aa1.54□□□□□ -2.16
SGCE-209ENST00000462731 PKHD1P08F94 4074 aa1.54□□□□□ -2.16
SGCE-209ENST00000462731 HUWE1Q7Z6Z7 4374 aaKnown RBP1.54□□□□□ -2.16
SGCE-209ENST00000462731 DNAH11Q96DT5 4516 aa1.53□□□□□ -2.16
SGCE-209ENST00000462731 M0R2T5 61 aa1.53□□□□□ -2.16
SGCE-209ENST00000462731 KRTAP2-3P0C7H8 128 aa1.53□□□□□ -2.16
SGCE-209ENST00000462731 KRTAP2-4Q9BYR9 128 aa1.53□□□□□ -2.16
SGCE-209ENST00000462731 KRTAP2-1Q9BYU5 128 aa1.53□□□□□ -2.16
SGCE-209ENST00000462731 STARD9Q9P2P6 4700 aa1.53□□□□□ -2.16
SGCE-209ENST00000462731 FAT1Q14517 4588 aa1.52□□□□□ -2.17
SGCE-209ENST00000462731 A8MTW9 85 aa1.49□□□□□ -2.17
SGCE-209ENST00000462731 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
SGCE-209ENST00000462731 U3KQA8 63 aa1.49□□□□□ -2.17
SGCE-209ENST00000462731 DNAH3Q8TD57 4116 aa1.49□□□□□ -2.17
SGCE-209ENST00000462731 NEBP20929 6669 aa1.48□□□□□ -2.17
SGCE-209ENST00000462731 M0QY20 66 aa1.48□□□□□ -2.17
SGCE-209ENST00000462731 CLPSL2Q6UWE3 100 aa1.48□□□□□ -2.17
SGCE-209ENST00000462731 RPL39LQ96EH5 51 aaKnown RBP1.48□□□□□ -2.17
SGCE-209ENST00000462731 ARHGAP5-AS1Q96IT6 56 aa1.48□□□□□ -2.17
SGCE-209ENST00000462731 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
SGCE-209ENST00000462731 VPS13DQ5THJ4 4388 aa1.47□□□□□ -2.17
SGCE-209ENST00000462731 LRP1BQ9NZR2 4599 aa1.47□□□□□ -2.17
SGCE-209ENST00000462731 DNAH6Q9C0G6 4158 aa1.46□□□□□ -2.18
SGCE-209ENST00000462731 LRP2P98164 4655 aa1.46□□□□□ -2.18
SGCE-209ENST00000462731 APOBP04114 4563 aaKnown RBP1.45□□□□□ -2.18
SGCE-209ENST00000462731 PKHD1L1Q86WI1 4243 aa1.45□□□□□ -2.18
SGCE-209ENST00000462731 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
SGCE-209ENST00000462731 DNAH5Q8TE73 4624 aa1.44□□□□□ -2.18
SGCE-209ENST00000462731 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
SGCE-209ENST00000462731 DNAH2Q9P225 4427 aa1.43□□□□□ -2.18
SGCE-209ENST00000462731 HRNRQ86YZ3 2850 aaPredicted RBP1.42□□□□□ -2.18
SGCE-209ENST00000462731 SRRM2Q9UQ35 2752 aaKnown RBP1.42□□□□□ -2.18
SGCE-209ENST00000462731 FAT3Q8TDW7 4589 aa1.41□□□□□ -2.18
SGCE-209ENST00000462731 DNAH17Q9UFH2 4485 aa1.4□□□□□ -2.19
SGCE-209ENST00000462731 USH2AO75445 5202 aa1.4□□□□□ -2.19
SGCE-209ENST00000462731 LRP1Q07954 4544 aaKnown RBP1.39□□□□□ -2.19
SGCE-209ENST00000462731 M0QZ58 72 aa1.39□□□□□ -2.19
SGCE-209ENST00000462731 MUC12Q9UKN1 5478 aa1.37□□□□□ -2.19
SGCE-209ENST00000462731 PKD1P98161 4303 aa1.37□□□□□ -2.19
SGCE-209ENST00000462731 PRM1P04553 51 aa1.36□□□□□ -2.19
SGCE-209ENST00000462731 LEAP2Q969E1 77 aa1.36□□□□□ -2.19
SGCE-209ENST00000462731 C9orf92A6NGG3 77 aa1.35□□□□□ -2.19
SGCE-209ENST00000462731 TNXBP22105 4242 aa1.34□□□□□ -2.19
SGCE-209ENST00000462731 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
SGCE-209ENST00000462731 MACF1Q9UPN3 7388 aaKnown RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms