RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 RPL37P61927 97 aaKnown RBP8.8□□□□□ -1
ACTB-207ENST00000462494 MYCBP2O75592 4640 aa8.78□□□□□ -1
ACTB-207ENST00000462494 XP32Q5T750 250 aa8.78□□□□□ -1
ACTB-207ENST00000462494 RYR3Q15413 4870 aa8.76□□□□□ -1.01
ACTB-207ENST00000462494 KRTAP17-1Q9BYP8 105 aa8.74□□□□□ -1.01
ACTB-207ENST00000462494 RYR1P21817 5038 aa8.73□□□□□ -1.01
ACTB-207ENST00000462494 CSAG1Q6PB30 78 aa8.69□□□□□ -1.02
ACTB-207ENST00000462494 KRTAP3-3Q9BYR6 98 aa8.68□□□□□ -1.02
ACTB-207ENST00000462494 MT1HL1P0DM35 61 aa8.64□□□□□ -1.03
ACTB-207ENST00000462494 S4R3F8 94 aa8.64□□□□□ -1.03
ACTB-207ENST00000462494 KIAA1109Q2LD37 5005 aa8.62□□□□□ -1.03
ACTB-207ENST00000462494 LINC01554Q52M75 96 aa8.6□□□□□ -1.03
ACTB-207ENST00000462494 KRTAP10-6P60371 365 aaPredicted RBP8.59□□□□□ -1.03
ACTB-207ENST00000462494 K7ERS5 55 aa8.58□□□□□ -1.04
ACTB-207ENST00000462494 LPAP08519 4548 aa8.54□□□□□ -1.04
ACTB-207ENST00000462494 KRTAP3-2Q9BYR7 98 aa8.53□□□□□ -1.04
ACTB-207ENST00000462494 KRTAP13-4Q3LI77 160 aa8.52□□□□□ -1.05
ACTB-207ENST00000462494 A0A0D9SG42 100 aa8.51□□□□□ -1.05
ACTB-207ENST00000462494 LRP2P98164 4655 aa8.47□□□□□ -1.05
ACTB-207ENST00000462494 P0C880 135 aa8.46□□□□□ -1.05
ACTB-207ENST00000462494 EPPK1P58107 5090 aaKnown RBP8.44□□□□□ -1.06
ACTB-207ENST00000462494 TPRXLQ17RH7 258 aa8.44□□□□□ -1.06
ACTB-207ENST00000462494 KRTAP25-1Q3LHN0 102 aa8.44□□□□□ -1.06
ACTB-207ENST00000462494 CRIPTQ9P021 101 aa8.42□□□□□ -1.06
ACTB-207ENST00000462494 ROMO1P60602 79 aa8.36□□□□□ -1.07
ACTB-207ENST00000462494 ABCA13Q86UQ4 5058 aa8.35□□□□□ -1.07
ACTB-207ENST00000462494 KRTAP4-5Q9BYR2 181 aa8.33□□□□□ -1.08
ACTB-207ENST00000462494 KRTAP12-2P59991 146 aa8.25□□□□□ -1.09
ACTB-207ENST00000462494 SPINT4Q6UDR6 99 aa8.22□□□□□ -1.09
ACTB-207ENST00000462494 KRTAP12-1P59990 96 aa8.17□□□□□ -1.1
ACTB-207ENST00000462494 M0QZ58 72 aa8.15□□□□□ -1.1
ACTB-207ENST00000462494 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
ACTB-207ENST00000462494 J3QL48 77 aa8.1□□□□□ -1.11
ACTB-207ENST00000462494 C10orf95Q9H7T3 257 aa8.1□□□□□ -1.11
ACTB-207ENST00000462494 MUC17Q685J3 4493 aa8.09□□□□□ -1.11
ACTB-207ENST00000462494 KRTAP4-1Q9BYQ7 146 aa8.05□□□□□ -1.12
ACTB-207ENST00000462494 R4GN34 69 aa8.03□□□□□ -1.12
ACTB-207ENST00000462494 HERC2O95714 4834 aa7.97□□□□□ -1.13
ACTB-207ENST00000462494 LORP23490 312 aaPredicted RBP7.94□□□□□ -1.14
ACTB-207ENST00000462494 KRTAP19-2Q3LHN2 52 aa7.84□□□□□ -1.15
ACTB-207ENST00000462494 MUC2Q02817 5179 aa7.83□□□□□ -1.16
ACTB-207ENST00000462494 H3BS24 57 aa7.75□□□□□ -1.17
ACTB-207ENST00000462494 FLGP20930 4061 aaPredicted RBP7.69□□□□□ -1.18
ACTB-207ENST00000462494 BIRC6Q9NR09 4857 aa7.69□□□□□ -1.18
ACTB-207ENST00000462494 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
ACTB-207ENST00000462494 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
ACTB-207ENST00000462494 HERC1Q15751 4861 aa7.62□□□□□ -1.19
ACTB-207ENST00000462494 PCLOQ9Y6V0 5065 aa7.53□□□□□ -1.2
ACTB-207ENST00000462494 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.21
ACTB-207ENST00000462494 NDUFAF8A1L188 74 aa7.49□□□□□ -1.21
ACTB-207ENST00000462494 FAT4Q6V0I7 4981 aa7.43□□□□□ -1.22
ACTB-207ENST00000462494 LCE2CQ5TA81 110 aa7.41□□□□□ -1.22
ACTB-207ENST00000462494 PLAC4Q8WY50 150 aa7.4□□□□□ -1.22
ACTB-207ENST00000462494 PP632Q6XCG6 107 aa7.39□□□□□ -1.23
ACTB-207ENST00000462494 M0R2T5 61 aa7.35□□□□□ -1.23
ACTB-207ENST00000462494 TNP1P09430 55 aa7.3□□□□□ -1.24
ACTB-207ENST00000462494 SPRR2GQ9BYE4 73 aa7.24□□□□□ -1.25
ACTB-207ENST00000462494 RNF213Q63HN8 5207 aa7.24□□□□□ -1.25
ACTB-207ENST00000462494 MT1HP80294 61 aa7.24□□□□□ -1.25
ACTB-207ENST00000462494 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
ACTB-207ENST00000462494 UBR4Q5T4S7 5183 aa7.21□□□□□ -1.25
ACTB-207ENST00000462494 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
ACTB-207ENST00000462494 MT1FP04733 61 aa7.12□□□□□ -1.27
ACTB-207ENST00000462494 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
ACTB-207ENST00000462494 MT2AP02795 61 aa7.11□□□□□ -1.27
ACTB-207ENST00000462494 LUZP6Q538Z0 58 aa7.05□□□□□ -1.28
ACTB-207ENST00000462494 KRTAP9-8Q9BYQ0 159 aa7.05□□□□□ -1.28
ACTB-207ENST00000462494 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
ACTB-207ENST00000462494 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
ACTB-207ENST00000462494 MT1BP07438 61 aa6.85□□□□□ -1.31
ACTB-207ENST00000462494 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
ACTB-207ENST00000462494 KRTAP10-5P60370 271 aa6.81□□□□□ -1.32
ACTB-207ENST00000462494 MT1XP80297 61 aa6.8□□□□□ -1.32
ACTB-207ENST00000462494 KRTAP9-3Q9BYQ3 159 aa6.76□□□□□ -1.33
ACTB-207ENST00000462494 KRTAP8-1Q8IUC2 63 aa6.7□□□□□ -1.34
ACTB-207ENST00000462494 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
ACTB-207ENST00000462494 KRTAP10-7P60409 375 aaPredicted RBP6.64□□□□□ -1.35
ACTB-207ENST00000462494 A0A0A0MQY5 61 aa6.62□□□□□ -1.35
ACTB-207ENST00000462494 KRTAP12-3P60328 96 aa6.6□□□□□ -1.35
ACTB-207ENST00000462494 PRO2289Q9P1D8 64 aa6.58□□□□□ -1.36
ACTB-207ENST00000462494 LCE2BO14633 110 aa6.51□□□□□ -1.37
ACTB-207ENST00000462494 USH2AO75445 5202 aa6.45□□□□□ -1.38
ACTB-207ENST00000462494 LCE2AQ5TA79 106 aaPredicted RBP6.38□□□□□ -1.39
ACTB-207ENST00000462494 KRTAP19-5Q3LI72 72 aa6.35□□□□□ -1.39
ACTB-207ENST00000462494 KMT2DO14686 5537 aa6.34□□□□□ -1.39
ACTB-207ENST00000462494 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
ACTB-207ENST00000462494 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
ACTB-207ENST00000462494 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
ACTB-207ENST00000462494 KRTAP19-7Q3SYF9 63 aa6.05□□□□□ -1.44
ACTB-207ENST00000462494 INE1O15225 51 aa5.98□□□□□ -1.45
ACTB-207ENST00000462494 SSPOA2VEC9 5147 aa5.97□□□□□ -1.45
ACTB-207ENST00000462494 KRTAP9-6A8MVA2 160 aa5.97□□□□□ -1.45
ACTB-207ENST00000462494 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
ACTB-207ENST00000462494 MT1EP04732 61 aa5.89□□□□□ -1.47
ACTB-207ENST00000462494 MT1LQ93083 61 aa5.88□□□□□ -1.47
ACTB-207ENST00000462494 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
ACTB-207ENST00000462494 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
ACTB-207ENST00000462494 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
ACTB-207ENST00000462494 KRTAP2-3P0C7H8 128 aa5.7□□□□□ -1.5
ACTB-207ENST00000462494 KRTAP2-4Q9BYR9 128 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms