RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 USP9XQ93008 2570 aaPredicted RBP0.04□□□□□ -2.4
SYPL1-203ENST00000460770 DNAH11Q96DT5 4516 aa0.04□□□□□ -2.4
SYPL1-203ENST00000460770 LMO7Q8WWI1 1683 aa0.04□□□□□ -2.4
SYPL1-203ENST00000460770 DNAH1Q9P2D7 4330 aa0.04□□□□□ -2.4
SYPL1-203ENST00000460770 TLN2Q9Y4G6 2542 aa0.04□□□□□ -2.4
SYPL1-203ENST00000460770 COL12A1Q99715 3063 aa0.03□□□□□ -2.4
SYPL1-203ENST00000460770 HERC2O95714 4834 aa0.03□□□□□ -2.4
SYPL1-203ENST00000460770 RANBP2P49792 3224 aaKnown RBP0.03□□□□□ -2.4
SYPL1-203ENST00000460770 ABCA5Q8WWZ7 1642 aa0.03□□□□□ -2.4
SYPL1-203ENST00000460770 MROH2AA6NES4 1674 aa0.03□□□□□ -2.4
SYPL1-203ENST00000460770 HYDINQ4G0P3 5121 aa0.03□□□□□ -2.4
SYPL1-203ENST00000460770 FAT3Q8TDW7 4589 aa0.03□□□□□ -2.4
SYPL1-203ENST00000460770 ITPR1Q14643 2758 aa0.03□□□□□ -2.41
SYPL1-203ENST00000460770 MXRA5Q9NR99 2828 aa0.03□□□□□ -2.41
SYPL1-203ENST00000460770 DNAH2Q9P225 4427 aa0.03□□□□□ -2.41
SYPL1-203ENST00000460770 ITPR3Q14573 2671 aa0.02□□□□□ -2.41
SYPL1-203ENST00000460770 ANK3Q12955 4377 aaKnown RBP0.02□□□□□ -2.41
SYPL1-203ENST00000460770 SPRR2FQ96RM1 72 aa0.02□□□□□ -2.41
SYPL1-203ENST00000460770 DNAH7Q8WXX0 4024 aa0.02□□□□□ -2.41
SYPL1-203ENST00000460770 LAMA1P25391 3075 aa0.02□□□□□ -2.41
SYPL1-203ENST00000460770 KIF21BO75037 1637 aa0.02□□□□□ -2.41
SYPL1-203ENST00000460770 SPTAN1Q13813 2472 aaKnown RBP0.02□□□□□ -2.41
SYPL1-203ENST00000460770 EPPK1P58107 5090 aaKnown RBP0.02□□□□□ -2.41
SYPL1-203ENST00000460770 USP9YO00507 2555 aaPredicted RBP0.01□□□□□ -2.41
SYPL1-203ENST00000460770 COL6A5A8TX70 2615 aa0.01□□□□□ -2.41
SYPL1-203ENST00000460770 STARD9Q9P2P6 4700 aa0.01□□□□□ -2.41
SYPL1-203ENST00000460770 DNHD1Q96M86 4753 aa0.01□□□□□ -2.41
SYPL1-203ENST00000460770 BIRC6Q9NR09 4857 aa0.01□□□□□ -2.41
SYPL1-203ENST00000460770 A0A0C4DFX4 3053 aa0.01□□□□□ -2.41
SYPL1-203ENST00000460770 ADGRG4Q8IZF6 3080 aa0.01□□□□□ -2.41
SYPL1-203ENST00000460770 DEFB1P60022 68 aa0.01□□□□□ -2.41
SYPL1-203ENST00000460770 KRTAP19-7Q3SYF9 63 aa0.01□□□□□ -2.41
SYPL1-203ENST00000460770 DNAH8Q96JB1 4490 aa0.01□□□□□ -2.41
SYPL1-203ENST00000460770 TRPM2O94759 1503 aa0.01□□□□□ -2.41
SYPL1-203ENST00000460770 TRIOO75962 3097 aa0.01□□□□□ -2.41
SYPL1-203ENST00000460770 TRRAPQ9Y4A5 3859 aa0□□□□□ -2.41
SYPL1-203ENST00000460770 PLECQ15149 4684 aaKnown RBP0□□□□□ -2.41
SYPL1-203ENST00000460770 CRYBG3Q68DQ2 2970 aa0□□□□□ -2.41
SYPL1-203ENST00000460770 DDX60Q8IY21 1712 aaKnown RBP0□□□□□ -2.41
SYPL1-203ENST00000460770 DYNC2H1Q8NCM8 4307 aaKnown RBP0□□□□□ -2.41
SYPL1-203ENST00000460770 FRYQ5TBA9 3013 aa-0□□□□□ -2.41
SYPL1-203ENST00000460770 CHD7Q9P2D1 2997 aa-0□□□□□ -2.41
SYPL1-203ENST00000460770 KIAA1109Q2LD37 5005 aa-0.01□□□□□ -2.41
SYPL1-203ENST00000460770 DOPEY1Q5JWR5 2465 aa-0.01□□□□□ -2.41
SYPL1-203ENST00000460770 FAM208AQ9UK61 1670 aaKnown RBP-0.01□□□□□ -2.41
SYPL1-203ENST00000460770 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
SYPL1-203ENST00000460770 RYR1P21817 5038 aa-0.01□□□□□ -2.41
SYPL1-203ENST00000460770 CELSR3Q9NYQ7 3312 aa-0.02□□□□□ -2.41
SYPL1-203ENST00000460770 NRXN3Q9Y4C0 1643 aa-0.02□□□□□ -2.41
SYPL1-203ENST00000460770 C5orf42Q9H799 3197 aa-0.02□□□□□ -2.41
SYPL1-203ENST00000460770 CMYA5Q8N3K9 4069 aa-0.02□□□□□ -2.41
SYPL1-203ENST00000460770 KRTAP19-8Q3LI54 63 aa-0.02□□□□□ -2.41
SYPL1-203ENST00000460770 TOMM7Q9P0U1 55 aa-0.02□□□□□ -2.41
SYPL1-203ENST00000460770 MUC17Q685J3 4493 aa-0.02□□□□□ -2.41
SYPL1-203ENST00000460770 USH2AO75445 5202 aa-0.02□□□□□ -2.41
SYPL1-203ENST00000460770 RELNP78509 3460 aa-0.03□□□□□ -2.41
SYPL1-203ENST00000460770 DYNC1H1Q14204 4646 aaKnown RBP-0.03□□□□□ -2.41
SYPL1-203ENST00000460770 ZFHX4Q86UP3 3567 aa-0.03□□□□□ -2.41
SYPL1-203ENST00000460770 TEX15Q9BXT5 2789 aa-0.03□□□□□ -2.41
SYPL1-203ENST00000460770 CFAP54Q96N23 3096 aa-0.03□□□□□ -2.41
SYPL1-203ENST00000460770 CSMD1Q96PZ7 3565 aa-0.04□□□□□ -2.42
SYPL1-203ENST00000460770 RYR3Q15413 4870 aa-0.04□□□□□ -2.42
SYPL1-203ENST00000460770 RYR2Q92736 4967 aa-0.04□□□□□ -2.42
SYPL1-203ENST00000460770 DNAH17Q9UFH2 4485 aa-0.04□□□□□ -2.42
SYPL1-203ENST00000460770 KRTAP8-1Q8IUC2 63 aa-0.04□□□□□ -2.42
SYPL1-203ENST00000460770 IQGAP2Q13576 1575 aa-0.04□□□□□ -2.42
SYPL1-203ENST00000460770 NFAT5O94916 1531 aa-0.04□□□□□ -2.42
SYPL1-203ENST00000460770 SMR3BP02814 79 aaPredicted RBP-0.05□□□□□ -2.42
SYPL1-203ENST00000460770 MGAQ8IWI9 3026 aa-0.05□□□□□ -2.42
SYPL1-203ENST00000460770 LRBAP50851 2863 aa-0.05□□□□□ -2.42
SYPL1-203ENST00000460770 IQGAP1P46940 1657 aa-0.05□□□□□ -2.42
SYPL1-203ENST00000460770 NIPBLQ6KC79 2804 aaeCLIP-0.05□□□□□ -2.42
SYPL1-203ENST00000460770 CLTCL1P53675 1640 aa-0.05□□□□□ -2.42
SYPL1-203ENST00000460770 DNAH5Q8TE73 4624 aa-0.06□□□□□ -2.42
SYPL1-203ENST00000460770 RNF213Q63HN8 5207 aa-0.06□□□□□ -2.42
SYPL1-203ENST00000460770 SMG1Q96Q15 3661 aaKnown RBP-0.06□□□□□ -2.42
SYPL1-203ENST00000460770 SRCAPQ6ZRS2 3230 aa-0.06□□□□□ -2.42
SYPL1-203ENST00000460770 PRUNE2Q8WUY3 3088 aa-0.06□□□□□ -2.42
SYPL1-203ENST00000460770 CFAP46Q8IYW2 2715 aa-0.07□□□□□ -2.42
SYPL1-203ENST00000460770 DNAH10Q8IVF4 4471 aa-0.07□□□□□ -2.42
SYPL1-203ENST00000460770 MYO9AB2RTY4 2548 aa-0.07□□□□□ -2.42
SYPL1-203ENST00000460770 DMXL2Q8TDJ6 3036 aa-0.07□□□□□ -2.42
SYPL1-203ENST00000460770 CEP295Q9C0D2 2601 aa-0.07□□□□□ -2.42
SYPL1-203ENST00000460770 RPL39P62891 51 aaKnown RBP-0.07□□□□□ -2.42
SYPL1-203ENST00000460770 MT1HP80294 61 aa-0.07□□□□□ -2.42
SYPL1-203ENST00000460770 KRTAP19-5Q3LI72 72 aa-0.07□□□□□ -2.42
SYPL1-203ENST00000460770 LEAP2Q969E1 77 aa-0.08□□□□□ -2.42
SYPL1-203ENST00000460770 LAMA2P24043 3122 aaKnown RBP-0.08□□□□□ -2.42
SYPL1-203ENST00000460770 KRTAP20-2Q3LI61 65 aa-0.09□□□□□ -2.42
SYPL1-203ENST00000460770 LINC01590Q5TEZ4 76 aa-0.09□□□□□ -2.42
SYPL1-203ENST00000460770 RPL39LQ96EH5 51 aaKnown RBP-0.09□□□□□ -2.42
SYPL1-203ENST00000460770 ATMQ13315 3056 aa-0.1□□□□□ -2.42
SYPL1-203ENST00000460770 SAMD9LQ8IVG5 1584 aa-0.1□□□□□ -2.42
SYPL1-203ENST00000460770 VPS13CQ709C8 3753 aa-0.1□□□□□ -2.43
SYPL1-203ENST00000460770 LAMA3Q16787 3333 aa-0.1□□□□□ -2.43
SYPL1-203ENST00000460770 SNRPGP62308 76 aaKnown RBP-0.1□□□□□ -2.43
SYPL1-203ENST00000460770 EYSQ5T1H1 3165 aa-0.1□□□□□ -2.43
SYPL1-203ENST00000460770 DNAH12Q6ZR08 3092 aa-0.1□□□□□ -2.43
SYPL1-203ENST00000460770 MT4P47944 62 aa-0.11□□□□□ -2.43
SYPL1-203ENST00000460770 DEFB136Q30KP8 78 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms