RNA–Protein interactions for RNA: ENST00000460766.5

IMP4-208, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 1 (best)

Gene IMP4, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-208ENST00000460766 XP32Q5T750 250 aa10.61□□□□□ -0.71
IMP4-208ENST00000460766 DMBT1Q9UGM3 2413 aaPredicted RBP10.6□□□□□ -0.71
IMP4-208ENST00000460766 RYR3Q15413 4870 aa10.57□□□□□ -0.72
IMP4-208ENST00000460766 KRTAP17-1Q9BYP8 105 aa10.56□□□□□ -0.72
IMP4-208ENST00000460766 RYR1P21817 5038 aa10.54□□□□□ -0.72
IMP4-208ENST00000460766 MYCBP2O75592 4640 aa10.54□□□□□ -0.72
IMP4-208ENST00000460766 KRTAP3-3Q9BYR6 98 aa10.48□□□□□ -0.73
IMP4-208ENST00000460766 CSAG1Q6PB30 78 aa10.47□□□□□ -0.73
IMP4-208ENST00000460766 MT1HL1P0DM35 61 aa10.45□□□□□ -0.74
IMP4-208ENST00000460766 KIAA1109Q2LD37 5005 aa10.43□□□□□ -0.74
IMP4-208ENST00000460766 S4R3F8 94 aa10.43□□□□□ -0.74
IMP4-208ENST00000460766 KRTAP10-6P60371 365 aaPredicted RBP10.38□□□□□ -0.75
IMP4-208ENST00000460766 LINC01554Q52M75 96 aa10.37□□□□□ -0.75
IMP4-208ENST00000460766 K7ERS5 55 aa10.36□□□□□ -0.75
IMP4-208ENST00000460766 KRTAP3-2Q9BYR7 98 aa10.31□□□□□ -0.76
IMP4-208ENST00000460766 KRTAP13-4Q3LI77 160 aa10.28□□□□□ -0.76
IMP4-208ENST00000460766 LPAP08519 4548 aa10.26□□□□□ -0.77
IMP4-208ENST00000460766 A0A0D9SG42 100 aa10.25□□□□□ -0.77
IMP4-208ENST00000460766 TPRXLQ17RH7 258 aa10.22□□□□□ -0.77
IMP4-208ENST00000460766 P0C880 135 aa10.22□□□□□ -0.77
IMP4-208ENST00000460766 EPPK1P58107 5090 aaKnown RBP10.19□□□□□ -0.78
IMP4-208ENST00000460766 LRP2P98164 4655 aa10.18□□□□□ -0.78
IMP4-208ENST00000460766 KRTAP25-1Q3LHN0 102 aa10.18□□□□□ -0.78
IMP4-208ENST00000460766 CRIPTQ9P021 101 aa10.12□□□□□ -0.79
IMP4-208ENST00000460766 ROMO1P60602 79 aa10.09□□□□□ -0.79
IMP4-208ENST00000460766 ABCA13Q86UQ4 5058 aa10.08□□□□□ -0.8
IMP4-208ENST00000460766 KRTAP4-5Q9BYR2 181 aa10.06□□□□□ -0.8
IMP4-208ENST00000460766 KRTAP12-2P59991 146 aa9.95□□□□□ -0.82
IMP4-208ENST00000460766 SPINT4Q6UDR6 99 aa9.91□□□□□ -0.82
IMP4-208ENST00000460766 KRTAP12-1P59990 96 aa9.87□□□□□ -0.83
IMP4-208ENST00000460766 M0QZ58 72 aa9.87□□□□□ -0.83
IMP4-208ENST00000460766 SEC61BP60468 96 aaKnown RBP9.86□□□□□ -0.83
IMP4-208ENST00000460766 J3QL48 77 aa9.79□□□□□ -0.84
IMP4-208ENST00000460766 C10orf95Q9H7T3 257 aa9.76□□□□□ -0.85
IMP4-208ENST00000460766 KRTAP4-1Q9BYQ7 146 aa9.72□□□□□ -0.85
IMP4-208ENST00000460766 MUC17Q685J3 4493 aa9.72□□□□□ -0.85
IMP4-208ENST00000460766 R4GN34 69 aa9.7□□□□□ -0.86
IMP4-208ENST00000460766 HERC2O95714 4834 aa9.62□□□□□ -0.87
IMP4-208ENST00000460766 LORP23490 312 aaPredicted RBP9.57□□□□□ -0.88
IMP4-208ENST00000460766 KRTAP19-2Q3LHN2 52 aa9.5□□□□□ -0.89
IMP4-208ENST00000460766 MUC2Q02817 5179 aa9.44□□□□□ -0.9
IMP4-208ENST00000460766 H3BS24 57 aa9.33□□□□□ -0.92
IMP4-208ENST00000460766 BIRC6Q9NR09 4857 aa9.3□□□□□ -0.92
IMP4-208ENST00000460766 KRTAP15-1Q3LI76 137 aa9.24□□□□□ -0.93
IMP4-208ENST00000460766 FLGP20930 4061 aaPredicted RBP9.21□□□□□ -0.93
IMP4-208ENST00000460766 CAMK2N1Q7Z7J9 78 aa9.21□□□□□ -0.93
IMP4-208ENST00000460766 HERC1Q15751 4861 aa9.19□□□□□ -0.94
IMP4-208ENST00000460766 PCLOQ9Y6V0 5065 aa9.14□□□□□ -0.95
IMP4-208ENST00000460766 HMCN2Q8NDA2 5059 aa9.11□□□□□ -0.95
IMP4-208ENST00000460766 NDUFAF8A1L188 74 aa9.02□□□□□ -0.96
IMP4-208ENST00000460766 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
IMP4-208ENST00000460766 FAT4Q6V0I7 4981 aa8.97□□□□□ -0.97
IMP4-208ENST00000460766 PP632Q6XCG6 107 aa8.94□□□□□ -0.98
IMP4-208ENST00000460766 PLAC4Q8WY50 150 aa8.93□□□□□ -0.98
IMP4-208ENST00000460766 M0R2T5 61 aa8.86□□□□□ -0.99
IMP4-208ENST00000460766 TNP1P09430 55 aa8.83□□□□□ -1
IMP4-208ENST00000460766 SPRR2GQ9BYE4 73 aa8.77□□□□□ -1.01
IMP4-208ENST00000460766 UBR4Q5T4S7 5183 aa8.76□□□□□ -1.01
IMP4-208ENST00000460766 RNF213Q63HN8 5207 aa8.76□□□□□ -1.01
IMP4-208ENST00000460766 MT1HP80294 61 aa8.76□□□□□ -1.01
IMP4-208ENST00000460766 KRTAP19-1Q8IUB9 90 aa8.74□□□□□ -1.01
IMP4-208ENST00000460766 KRTAP10-10P60014 251 aa8.63□□□□□ -1.03
IMP4-208ENST00000460766 KRTAP23-1A1A580 65 aa8.63□□□□□ -1.03
IMP4-208ENST00000460766 MT1FP04733 61 aa8.61□□□□□ -1.03
IMP4-208ENST00000460766 MT2AP02795 61 aa8.6□□□□□ -1.03
IMP4-208ENST00000460766 KRTAP9-8Q9BYQ0 159 aa8.54□□□□□ -1.04
IMP4-208ENST00000460766 LUZP6Q538Z0 58 aa8.51□□□□□ -1.05
IMP4-208ENST00000460766 KRTAP19-8Q3LI54 63 aa8.37□□□□□ -1.07
IMP4-208ENST00000460766 LCE3AQ5TA76 89 aa8.37□□□□□ -1.07
IMP4-208ENST00000460766 MT1BP07438 61 aa8.29□□□□□ -1.08
IMP4-208ENST00000460766 SPRR5A0A1B0GTR4 108 aa8.27□□□□□ -1.09
IMP4-208ENST00000460766 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
IMP4-208ENST00000460766 MT1XP80297 61 aa8.22□□□□□ -1.09
IMP4-208ENST00000460766 KRTAP9-3Q9BYQ3 159 aa8.18□□□□□ -1.1
IMP4-208ENST00000460766 KRTAP8-1Q8IUC2 63 aa8.12□□□□□ -1.11
IMP4-208ENST00000460766 KRTAP10-12P60413 245 aa8.07□□□□□ -1.12
IMP4-208ENST00000460766 KRTAP10-7P60409 375 aaPredicted RBP8.02□□□□□ -1.13
IMP4-208ENST00000460766 A0A0A0MQY5 61 aa7.99□□□□□ -1.13
IMP4-208ENST00000460766 KRTAP12-3P60328 96 aa7.97□□□□□ -1.13
IMP4-208ENST00000460766 PRO2289Q9P1D8 64 aa7.96□□□□□ -1.13
IMP4-208ENST00000460766 LCE2BO14633 110 aa7.87□□□□□ -1.15
IMP4-208ENST00000460766 USH2AO75445 5202 aa7.79□□□□□ -1.16
IMP4-208ENST00000460766 LCE2AQ5TA79 106 aaPredicted RBP7.74□□□□□ -1.17
IMP4-208ENST00000460766 KRTAP19-5Q3LI72 72 aa7.67□□□□□ -1.18
IMP4-208ENST00000460766 KMT2DO14686 5537 aa7.62□□□□□ -1.19
IMP4-208ENST00000460766 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
IMP4-208ENST00000460766 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
IMP4-208ENST00000460766 LCE3CQ5T5A8 94 aa7.49□□□□□ -1.21
IMP4-208ENST00000460766 KRTAP19-7Q3SYF9 63 aa7.33□□□□□ -1.24
IMP4-208ENST00000460766 INE1O15225 51 aa7.23□□□□□ -1.25
IMP4-208ENST00000460766 SSPOA2VEC9 5147 aa7.21□□□□□ -1.25
IMP4-208ENST00000460766 KRTAP9-6A8MVA2 160 aa7.21□□□□□ -1.26
IMP4-208ENST00000460766 KRTAP4-7Q9BYR0 210 aa7.19□□□□□ -1.26
IMP4-208ENST00000460766 MT1EP04732 61 aa7.12□□□□□ -1.27
IMP4-208ENST00000460766 MT1LQ93083 61 aa7.11□□□□□ -1.27
IMP4-208ENST00000460766 FSIP2Q5CZC0 6907 aa7.09□□□□□ -1.28
IMP4-208ENST00000460766 KRTAP19-6Q3LI70 58 aa7.06□□□□□ -1.28
IMP4-208ENST00000460766 KRTAP19-4Q3LI73 84 aa7.04□□□□□ -1.28
IMP4-208ENST00000460766 KRTAP2-3P0C7H8 128 aa6.9□□□□□ -1.3
IMP4-208ENST00000460766 KRTAP2-4Q9BYR9 128 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms