RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 NDUFAF8A1L188 74 aa4.94□□□□□ -1.62
EPB41-208ENST00000460378 VPS13DQ5THJ4 4388 aa4.92□□□□□ -1.62
EPB41-208ENST00000460378 STARD9Q9P2P6 4700 aa4.92□□□□□ -1.62
EPB41-208ENST00000460378 HERC2O95714 4834 aa4.9□□□□□ -1.63
EPB41-208ENST00000460378 SACSQ9NZJ4 4579 aa4.87□□□□□ -1.63
EPB41-208ENST00000460378 LRP1BQ9NZR2 4599 aa4.86□□□□□ -1.63
EPB41-208ENST00000460378 FAT2Q9NYQ8 4349 aa4.84□□□□□ -1.63
EPB41-208ENST00000460378 DNAH17Q9UFH2 4485 aa4.78□□□□□ -1.64
EPB41-208ENST00000460378 DNAH3Q8TD57 4116 aa4.78□□□□□ -1.64
EPB41-208ENST00000460378 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
EPB41-208ENST00000460378 KRTAP10-6P60371 365 aaPredicted RBP4.76□□□□□ -1.65
EPB41-208ENST00000460378 DNAH6Q9C0G6 4158 aa4.76□□□□□ -1.65
EPB41-208ENST00000460378 MT1HP80294 61 aa4.75□□□□□ -1.65
EPB41-208ENST00000460378 H0YAA0 97 aa4.75□□□□□ -1.65
EPB41-208ENST00000460378 KMT2CQ8NEZ4 4911 aaKnown RBP4.75□□□□□ -1.65
EPB41-208ENST00000460378 CMYA5Q8N3K9 4069 aa4.74□□□□□ -1.65
EPB41-208ENST00000460378 PCLOQ9Y6V0 5065 aa4.73□□□□□ -1.65
EPB41-208ENST00000460378 KRTAP9-2Q9BYQ4 174 aa4.72□□□□□ -1.65
EPB41-208ENST00000460378 FAT1Q14517 4588 aa4.72□□□□□ -1.65
EPB41-208ENST00000460378 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
EPB41-208ENST00000460378 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
EPB41-208ENST00000460378 HYDINQ4G0P3 5121 aa4.69□□□□□ -1.66
EPB41-208ENST00000460378 TNP1P09430 55 aa4.68□□□□□ -1.66
EPB41-208ENST00000460378 LORP23490 312 aaPredicted RBP4.67□□□□□ -1.66
EPB41-208ENST00000460378 EPPK1P58107 5090 aaKnown RBP4.67□□□□□ -1.66
EPB41-208ENST00000460378 DNAH2Q9P225 4427 aa4.65□□□□□ -1.66
EPB41-208ENST00000460378 KRTAP4-1Q9BYQ7 146 aa4.64□□□□□ -1.67
EPB41-208ENST00000460378 P0C880 135 aa4.61□□□□□ -1.67
EPB41-208ENST00000460378 DNAH7Q8WXX0 4024 aa4.61□□□□□ -1.67
EPB41-208ENST00000460378 APOBP04114 4563 aaKnown RBP4.61□□□□□ -1.67
EPB41-208ENST00000460378 KMT2AQ03164 3969 aa4.6□□□□□ -1.67
EPB41-208ENST00000460378 HERC1Q15751 4861 aa4.58□□□□□ -1.68
EPB41-208ENST00000460378 HSPG2P98160 4391 aa4.57□□□□□ -1.68
EPB41-208ENST00000460378 ABCA13Q86UQ4 5058 aa4.56□□□□□ -1.68
EPB41-208ENST00000460378 PP632Q6XCG6 107 aa4.55□□□□□ -1.68
EPB41-208ENST00000460378 DNAH8Q96JB1 4490 aa4.53□□□□□ -1.68
EPB41-208ENST00000460378 PKHD1L1Q86WI1 4243 aa4.53□□□□□ -1.68
EPB41-208ENST00000460378 MT2AP02795 61 aa4.51□□□□□ -1.69
EPB41-208ENST00000460378 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
EPB41-208ENST00000460378 VPS13BQ7Z7G8 4022 aa4.47□□□□□ -1.69
EPB41-208ENST00000460378 LYSTQ99698 3801 aa4.47□□□□□ -1.69
EPB41-208ENST00000460378 MYCBP2O75592 4640 aa4.47□□□□□ -1.69
EPB41-208ENST00000460378 FAT3Q8TDW7 4589 aa4.45□□□□□ -1.7
EPB41-208ENST00000460378 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
EPB41-208ENST00000460378 CSMD3Q7Z407 3707 aa4.44□□□□□ -1.7
EPB41-208ENST00000460378 KRTAP12-2P59991 146 aa4.42□□□□□ -1.7
EPB41-208ENST00000460378 MT1FP04733 61 aa4.38□□□□□ -1.71
EPB41-208ENST00000460378 KRTAP3-1Q9BYR8 98 aa4.36□□□□□ -1.71
EPB41-208ENST00000460378 LCE2AQ5TA79 106 aaPredicted RBP4.35□□□□□ -1.71
EPB41-208ENST00000460378 LRP1Q07954 4544 aaKnown RBP4.35□□□□□ -1.71
EPB41-208ENST00000460378 KRTAP12-1P59990 96 aa4.34□□□□□ -1.72
EPB41-208ENST00000460378 HECTD4Q9Y4D8 3996 aa4.34□□□□□ -1.72
EPB41-208ENST00000460378 FRAS1Q86XX4 4008 aa4.31□□□□□ -1.72
EPB41-208ENST00000460378 KRTAP19-1Q8IUB9 90 aa4.3□□□□□ -1.72
EPB41-208ENST00000460378 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
EPB41-208ENST00000460378 PKHD1P08F94 4074 aa4.3□□□□□ -1.72
EPB41-208ENST00000460378 LRP2P98164 4655 aa4.29□□□□□ -1.72
EPB41-208ENST00000460378 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
EPB41-208ENST00000460378 KRTAP13-4Q3LI77 160 aa4.28□□□□□ -1.72
EPB41-208ENST00000460378 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
EPB41-208ENST00000460378 PKD1P98161 4303 aa4.26□□□□□ -1.73
EPB41-208ENST00000460378 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
EPB41-208ENST00000460378 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
EPB41-208ENST00000460378 SPRR2EP22531 72 aa4.23□□□□□ -1.73
EPB41-208ENST00000460378 SPRR2BP35325 72 aa4.23□□□□□ -1.73
EPB41-208ENST00000460378 SPRR2AP35326 72 aa4.23□□□□□ -1.73
EPB41-208ENST00000460378 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
EPB41-208ENST00000460378 KRTAP9-8Q9BYQ0 159 aa4.19□□□□□ -1.74
EPB41-208ENST00000460378 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
EPB41-208ENST00000460378 KRTAP3-3Q9BYR6 98 aa4.15□□□□□ -1.75
EPB41-208ENST00000460378 HMCN2Q8NDA2 5059 aa4.13□□□□□ -1.75
EPB41-208ENST00000460378 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
EPB41-208ENST00000460378 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
EPB41-208ENST00000460378 SPRR2DP22532 72 aa4.11□□□□□ -1.75
EPB41-208ENST00000460378 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.75
EPB41-208ENST00000460378 KRTAP10-5P60370 271 aa4.09□□□□□ -1.75
EPB41-208ENST00000460378 KRTAP3-2Q9BYR7 98 aa4.08□□□□□ -1.76
EPB41-208ENST00000460378 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
EPB41-208ENST00000460378 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
EPB41-208ENST00000460378 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
EPB41-208ENST00000460378 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
EPB41-208ENST00000460378 FAT4Q6V0I7 4981 aa4.03□□□□□ -1.77
EPB41-208ENST00000460378 LCE2BO14633 110 aa4.02□□□□□ -1.77
EPB41-208ENST00000460378 KRTAP6-3Q3LI67 103 aa4□□□□□ -1.77
EPB41-208ENST00000460378 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
EPB41-208ENST00000460378 LPAP08519 4548 aa3.96□□□□□ -1.78
EPB41-208ENST00000460378 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
EPB41-208ENST00000460378 TNXBP22105 4242 aa3.94□□□□□ -1.78
EPB41-208ENST00000460378 MUC17Q685J3 4493 aa3.92□□□□□ -1.78
EPB41-208ENST00000460378 MT1BP07438 61 aa3.91□□□□□ -1.78
EPB41-208ENST00000460378 KRTAP12-3P60328 96 aa3.9□□□□□ -1.79
EPB41-208ENST00000460378 INE1O15225 51 aa3.9□□□□□ -1.79
EPB41-208ENST00000460378 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
EPB41-208ENST00000460378 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
EPB41-208ENST00000460378 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
EPB41-208ENST00000460378 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.81
EPB41-208ENST00000460378 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
EPB41-208ENST00000460378 MT1XP80297 61 aa3.75□□□□□ -1.81
EPB41-208ENST00000460378 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
EPB41-208ENST00000460378 KRTAP23-1A1A580 65 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms