RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 C20orf166-AS1Q96NR2 134 aa5.02□□□□□ -1.61
NUDCD3-203ENST00000460110 MT1HL1P0DM35 61 aa5.01□□□□□ -1.61
NUDCD3-203ENST00000460110 UQCR11O14957 56 aa5.01□□□□□ -1.61
NUDCD3-203ENST00000460110 DMAC1Q96GE9 116 aa5□□□□□ -1.61
NUDCD3-203ENST00000460110 XP32Q5T750 250 aa4.99□□□□□ -1.61
NUDCD3-203ENST00000460110 PKHD1L1Q86WI1 4243 aa4.98□□□□□ -1.61
NUDCD3-203ENST00000460110 RPL37P61927 97 aaKnown RBP4.95□□□□□ -1.62
NUDCD3-203ENST00000460110 HERC2O95714 4834 aa4.93□□□□□ -1.62
NUDCD3-203ENST00000460110 SPATA8Q6RVD6 105 aa4.92□□□□□ -1.62
NUDCD3-203ENST00000460110 LCE2DQ5TA82 110 aaPredicted RBP4.91□□□□□ -1.62
NUDCD3-203ENST00000460110 COX6B2Q6YFQ2 88 aa4.89□□□□□ -1.63
NUDCD3-203ENST00000460110 LRP2P98164 4655 aa4.89□□□□□ -1.63
NUDCD3-203ENST00000460110 TNXBP22105 4242 aa4.88□□□□□ -1.63
NUDCD3-203ENST00000460110 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
NUDCD3-203ENST00000460110 KRTAP3-1Q9BYR8 98 aa4.85□□□□□ -1.63
NUDCD3-203ENST00000460110 LPAP08519 4548 aa4.85□□□□□ -1.63
NUDCD3-203ENST00000460110 CRIPTQ9P021 101 aa4.84□□□□□ -1.63
NUDCD3-203ENST00000460110 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
NUDCD3-203ENST00000460110 TPRXLQ17RH7 258 aa4.83□□□□□ -1.64
NUDCD3-203ENST00000460110 ROMO1P60602 79 aa4.82□□□□□ -1.64
NUDCD3-203ENST00000460110 SEC61BP60468 96 aaKnown RBP4.8□□□□□ -1.64
NUDCD3-203ENST00000460110 S4R3F8 94 aa4.8□□□□□ -1.64
NUDCD3-203ENST00000460110 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
NUDCD3-203ENST00000460110 BIRC6Q9NR09 4857 aa4.77□□□□□ -1.65
NUDCD3-203ENST00000460110 K7ERS5 55 aa4.76□□□□□ -1.65
NUDCD3-203ENST00000460110 A0A0D9SG42 100 aa4.76□□□□□ -1.65
NUDCD3-203ENST00000460110 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
NUDCD3-203ENST00000460110 HERC1Q15751 4861 aa4.74□□□□□ -1.65
NUDCD3-203ENST00000460110 A0A1B0GU33 70 aa4.74□□□□□ -1.65
NUDCD3-203ENST00000460110 H1FX-AS1Q4G0G2 97 aa4.73□□□□□ -1.65
NUDCD3-203ENST00000460110 KRTAP3-3Q9BYR6 98 aa4.73□□□□□ -1.65
NUDCD3-203ENST00000460110 KRTAP3-2Q9BYR7 98 aa4.73□□□□□ -1.65
NUDCD3-203ENST00000460110 MUC2Q02817 5179 aa4.68□□□□□ -1.66
NUDCD3-203ENST00000460110 PCLOQ9Y6V0 5065 aa4.67□□□□□ -1.66
NUDCD3-203ENST00000460110 H0YAA0 97 aa4.65□□□□□ -1.67
NUDCD3-203ENST00000460110 P0C880 135 aa4.64□□□□□ -1.67
NUDCD3-203ENST00000460110 KRTAP4-1Q9BYQ7 146 aa4.63□□□□□ -1.67
NUDCD3-203ENST00000460110 NDUFAF8A1L188 74 aa4.62□□□□□ -1.67
NUDCD3-203ENST00000460110 M0R2T5 61 aa4.6□□□□□ -1.67
NUDCD3-203ENST00000460110 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
NUDCD3-203ENST00000460110 M0QZ58 72 aa4.55□□□□□ -1.68
NUDCD3-203ENST00000460110 R4GN34 69 aa4.55□□□□□ -1.68
NUDCD3-203ENST00000460110 KRTAP10-6P60371 365 aaPredicted RBP4.54□□□□□ -1.68
NUDCD3-203ENST00000460110 KRTAP13-4Q3LI77 160 aa4.52□□□□□ -1.69
NUDCD3-203ENST00000460110 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
NUDCD3-203ENST00000460110 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
NUDCD3-203ENST00000460110 FAT4Q6V0I7 4981 aa4.48□□□□□ -1.69
NUDCD3-203ENST00000460110 HMCN2Q8NDA2 5059 aa4.46□□□□□ -1.7
NUDCD3-203ENST00000460110 LORP23490 312 aaPredicted RBP4.41□□□□□ -1.7
NUDCD3-203ENST00000460110 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
NUDCD3-203ENST00000460110 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
NUDCD3-203ENST00000460110 CAMK2N1Q7Z7J9 78 aa4.38□□□□□ -1.71
NUDCD3-203ENST00000460110 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
NUDCD3-203ENST00000460110 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
NUDCD3-203ENST00000460110 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
NUDCD3-203ENST00000460110 KRTAP10-10P60014 251 aa4.31□□□□□ -1.72
NUDCD3-203ENST00000460110 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
NUDCD3-203ENST00000460110 FLGP20930 4061 aaPredicted RBP4.27□□□□□ -1.73
NUDCD3-203ENST00000460110 LCE2CQ5TA81 110 aa4.23□□□□□ -1.73
NUDCD3-203ENST00000460110 MT1HP80294 61 aa4.23□□□□□ -1.73
NUDCD3-203ENST00000460110 PLAC4Q8WY50 150 aa4.19□□□□□ -1.74
NUDCD3-203ENST00000460110 MT1FP04733 61 aa4.12□□□□□ -1.75
NUDCD3-203ENST00000460110 MT2AP02795 61 aa4.11□□□□□ -1.75
NUDCD3-203ENST00000460110 FSIP2Q5CZC0 6907 aa4.07□□□□□ -1.76
NUDCD3-203ENST00000460110 LCE2BO14633 110 aa4.07□□□□□ -1.76
NUDCD3-203ENST00000460110 KRTAP9-8Q9BYQ0 159 aa4.04□□□□□ -1.76
NUDCD3-203ENST00000460110 KRTAP19-1Q8IUB9 90 aa4.03□□□□□ -1.76
NUDCD3-203ENST00000460110 TNP1P09430 55 aa4.03□□□□□ -1.76
NUDCD3-203ENST00000460110 SPRR2GQ9BYE4 73 aa3.99□□□□□ -1.77
NUDCD3-203ENST00000460110 USH2AO75445 5202 aa3.97□□□□□ -1.77
NUDCD3-203ENST00000460110 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
NUDCD3-203ENST00000460110 MT1BP07438 61 aa3.86□□□□□ -1.79
NUDCD3-203ENST00000460110 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
NUDCD3-203ENST00000460110 LCE2AQ5TA79 106 aaPredicted RBP3.83□□□□□ -1.8
NUDCD3-203ENST00000460110 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
NUDCD3-203ENST00000460110 KRTAP19-8Q3LI54 63 aa3.81□□□□□ -1.8
NUDCD3-203ENST00000460110 LCE3AQ5TA76 89 aa3.8□□□□□ -1.8
NUDCD3-203ENST00000460110 MT1XP80297 61 aa3.78□□□□□ -1.8
NUDCD3-203ENST00000460110 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
NUDCD3-203ENST00000460110 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
NUDCD3-203ENST00000460110 KMT2DO14686 5537 aa3.74□□□□□ -1.81
NUDCD3-203ENST00000460110 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
NUDCD3-203ENST00000460110 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
NUDCD3-203ENST00000460110 KRTAP4-8A0A0G2JLE6 195 aa3.65□□□□□ -1.82
NUDCD3-203ENST00000460110 KRTAP4-8Q9BYQ9 185 aa3.65□□□□□ -1.82
NUDCD3-203ENST00000460110 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
NUDCD3-203ENST00000460110 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
NUDCD3-203ENST00000460110 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
NUDCD3-203ENST00000460110 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
NUDCD3-203ENST00000460110 INE1O15225 51 aa3.55□□□□□ -1.84
NUDCD3-203ENST00000460110 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
NUDCD3-203ENST00000460110 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.86
NUDCD3-203ENST00000460110 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
NUDCD3-203ENST00000460110 MUC12Q9UKN1 5478 aa3.44□□□□□ -1.86
NUDCD3-203ENST00000460110 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
NUDCD3-203ENST00000460110 KRTAP4-7Q9BYR0 210 aa3.4□□□□□ -1.86
NUDCD3-203ENST00000460110 KRTAP9-2Q9BYQ4 174 aa3.39□□□□□ -1.87
NUDCD3-203ENST00000460110 MACF1Q9UPN3 7388 aaKnown RBP3.37□□□□□ -1.87
NUDCD3-203ENST00000460110 SPRR2FQ96RM1 72 aa3.36□□□□□ -1.87
NUDCD3-203ENST00000460110 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms