RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 KRTAP10-4P60372 401 aaPredicted RBP4.98□□□□□ -1.61
MCF2L2-204ENST00000459750 A8MUU9 505 aa4.96□□□□□ -1.61
MCF2L2-204ENST00000459750 NDUFAF8A1L188 74 aa4.95□□□□□ -1.62
MCF2L2-204ENST00000459750 C20orf166-AS1Q96NR2 134 aa4.94□□□□□ -1.62
MCF2L2-204ENST00000459750 J3QL48 77 aa4.93□□□□□ -1.62
MCF2L2-204ENST00000459750 ACYP2P14621 99 aa4.92□□□□□ -1.62
MCF2L2-204ENST00000459750 LPAP08519 4548 aa4.91□□□□□ -1.62
MCF2L2-204ENST00000459750 ABCA13Q86UQ4 5058 aa4.9□□□□□ -1.63
MCF2L2-204ENST00000459750 TNXBP22105 4242 aa4.89□□□□□ -1.63
MCF2L2-204ENST00000459750 LUZP6Q538Z0 58 aa4.88□□□□□ -1.63
MCF2L2-204ENST00000459750 LRP2P98164 4655 aa4.87□□□□□ -1.63
MCF2L2-204ENST00000459750 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
MCF2L2-204ENST00000459750 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
MCF2L2-204ENST00000459750 DMAC1Q96GE9 116 aa4.86□□□□□ -1.63
MCF2L2-204ENST00000459750 KRTAP4-5Q9BYR2 181 aa4.86□□□□□ -1.63
MCF2L2-204ENST00000459750 K7ERS5 55 aa4.83□□□□□ -1.64
MCF2L2-204ENST00000459750 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
MCF2L2-204ENST00000459750 MUC2Q02817 5179 aa4.79□□□□□ -1.64
MCF2L2-204ENST00000459750 KRTAP10-8P60410 259 aa4.78□□□□□ -1.64
MCF2L2-204ENST00000459750 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.64
MCF2L2-204ENST00000459750 RPS29P62273 56 aaKnown RBP4.76□□□□□ -1.65
MCF2L2-204ENST00000459750 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
MCF2L2-204ENST00000459750 MT1HL1P0DM35 61 aa4.74□□□□□ -1.65
MCF2L2-204ENST00000459750 XP32Q5T750 250 aa4.73□□□□□ -1.65
MCF2L2-204ENST00000459750 HERC2O95714 4834 aa4.73□□□□□ -1.65
MCF2L2-204ENST00000459750 H0YAA0 97 aa4.68□□□□□ -1.66
MCF2L2-204ENST00000459750 HERC1Q15751 4861 aa4.67□□□□□ -1.66
MCF2L2-204ENST00000459750 RPL37P61927 97 aaKnown RBP4.65□□□□□ -1.66
MCF2L2-204ENST00000459750 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
MCF2L2-204ENST00000459750 A0A0D9SG42 100 aa4.61□□□□□ -1.67
MCF2L2-204ENST00000459750 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
MCF2L2-204ENST00000459750 TPRXLQ17RH7 258 aa4.59□□□□□ -1.68
MCF2L2-204ENST00000459750 A0A1B0GU33 70 aa4.57□□□□□ -1.68
MCF2L2-204ENST00000459750 RNF213Q63HN8 5207 aa4.56□□□□□ -1.68
MCF2L2-204ENST00000459750 S4R3F8 94 aa4.55□□□□□ -1.68
MCF2L2-204ENST00000459750 KRTAP3-3Q9BYR6 98 aa4.54□□□□□ -1.68
MCF2L2-204ENST00000459750 FAT4Q6V0I7 4981 aa4.52□□□□□ -1.69
MCF2L2-204ENST00000459750 H1FX-AS1Q4G0G2 97 aa4.52□□□□□ -1.69
MCF2L2-204ENST00000459750 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
MCF2L2-204ENST00000459750 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
MCF2L2-204ENST00000459750 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
MCF2L2-204ENST00000459750 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
MCF2L2-204ENST00000459750 BIRC6Q9NR09 4857 aa4.47□□□□□ -1.69
MCF2L2-204ENST00000459750 KRTAP10-6P60371 365 aaPredicted RBP4.46□□□□□ -1.7
MCF2L2-204ENST00000459750 UBR4Q5T4S7 5183 aa4.45□□□□□ -1.7
MCF2L2-204ENST00000459750 KRTAP3-2Q9BYR7 98 aa4.43□□□□□ -1.7
MCF2L2-204ENST00000459750 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
MCF2L2-204ENST00000459750 MUC17Q685J3 4493 aa4.4□□□□□ -1.71
MCF2L2-204ENST00000459750 LORP23490 312 aaPredicted RBP4.35□□□□□ -1.71
MCF2L2-204ENST00000459750 HMCN2Q8NDA2 5059 aa4.34□□□□□ -1.72
MCF2L2-204ENST00000459750 KRTAP12-2P59991 146 aa4.33□□□□□ -1.72
MCF2L2-204ENST00000459750 M0QZ58 72 aa4.32□□□□□ -1.72
MCF2L2-204ENST00000459750 R4GN34 69 aa4.29□□□□□ -1.72
MCF2L2-204ENST00000459750 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
MCF2L2-204ENST00000459750 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
MCF2L2-204ENST00000459750 M0R2T5 61 aa4.21□□□□□ -1.74
MCF2L2-204ENST00000459750 FLGP20930 4061 aaPredicted RBP4.19□□□□□ -1.74
MCF2L2-204ENST00000459750 KRTAP19-2Q3LHN2 52 aa4.18□□□□□ -1.74
MCF2L2-204ENST00000459750 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
MCF2L2-204ENST00000459750 LCE2CQ5TA81 110 aa4.06□□□□□ -1.76
MCF2L2-204ENST00000459750 USH2AO75445 5202 aa4.04□□□□□ -1.76
MCF2L2-204ENST00000459750 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
MCF2L2-204ENST00000459750 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
MCF2L2-204ENST00000459750 MT1HP80294 61 aa3.99□□□□□ -1.77
MCF2L2-204ENST00000459750 LCE2BO14633 110 aa3.99□□□□□ -1.77
MCF2L2-204ENST00000459750 INE1O15225 51 aa3.94□□□□□ -1.78
MCF2L2-204ENST00000459750 MT1FP04733 61 aa3.93□□□□□ -1.78
MCF2L2-204ENST00000459750 MT2AP02795 61 aa3.9□□□□□ -1.79
MCF2L2-204ENST00000459750 KRTAP19-1Q8IUB9 90 aa3.89□□□□□ -1.79
MCF2L2-204ENST00000459750 LCE2AQ5TA79 106 aaPredicted RBP3.89□□□□□ -1.79
MCF2L2-204ENST00000459750 KMT2DO14686 5537 aa3.87□□□□□ -1.79
MCF2L2-204ENST00000459750 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
MCF2L2-204ENST00000459750 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
MCF2L2-204ENST00000459750 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
MCF2L2-204ENST00000459750 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
MCF2L2-204ENST00000459750 TNP1P09430 55 aa3.79□□□□□ -1.8
MCF2L2-204ENST00000459750 SPRR2GQ9BYE4 73 aa3.79□□□□□ -1.8
MCF2L2-204ENST00000459750 MT1BP07438 61 aa3.7□□□□□ -1.82
MCF2L2-204ENST00000459750 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
MCF2L2-204ENST00000459750 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
MCF2L2-204ENST00000459750 MT1XP80297 61 aa3.65□□□□□ -1.83
MCF2L2-204ENST00000459750 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
MCF2L2-204ENST00000459750 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
MCF2L2-204ENST00000459750 KRTAP19-8Q3LI54 63 aa3.6□□□□□ -1.83
MCF2L2-204ENST00000459750 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
MCF2L2-204ENST00000459750 KRTAP4-8A0A0G2JLE6 195 aa3.55□□□□□ -1.84
MCF2L2-204ENST00000459750 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
MCF2L2-204ENST00000459750 KRTAP4-8Q9BYQ9 185 aa3.55□□□□□ -1.84
MCF2L2-204ENST00000459750 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
MCF2L2-204ENST00000459750 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
MCF2L2-204ENST00000459750 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
MCF2L2-204ENST00000459750 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
MCF2L2-204ENST00000459750 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
MCF2L2-204ENST00000459750 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
MCF2L2-204ENST00000459750 KRTAP9-6A0A140TA67 174 aa3.4□□□□□ -1.86
MCF2L2-204ENST00000459750 KRTAP4-7Q9BYR0 210 aa3.38□□□□□ -1.87
MCF2L2-204ENST00000459750 KRTAP9-2Q9BYQ4 174 aa3.36□□□□□ -1.87
MCF2L2-204ENST00000459750 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
MCF2L2-204ENST00000459750 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
MCF2L2-204ENST00000459750 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms