RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 RPL37P61927 97 aaKnown RBP10.69□□□□□ -0.7
CRAT-207ENST00000458362 KRTAP17-1Q9BYP8 105 aa10.69□□□□□ -0.7
CRAT-207ENST00000458362 RYR1P21817 5038 aa10.67□□□□□ -0.7
CRAT-207ENST00000458362 XP32Q5T750 250 aa10.66□□□□□ -0.7
CRAT-207ENST00000458362 RYR3Q15413 4870 aa10.62□□□□□ -0.71
CRAT-207ENST00000458362 CSAG1Q6PB30 78 aa10.62□□□□□ -0.71
CRAT-207ENST00000458362 KRTAP3-3Q9BYR6 98 aa10.62□□□□□ -0.71
CRAT-207ENST00000458362 MYCBP2O75592 4640 aa10.56□□□□□ -0.72
CRAT-207ENST00000458362 MT1HL1P0DM35 61 aa10.52□□□□□ -0.73
CRAT-207ENST00000458362 KRTAP10-6P60371 365 aaPredicted RBP10.52□□□□□ -0.73
CRAT-207ENST00000458362 LINC01554Q52M75 96 aa10.52□□□□□ -0.73
CRAT-207ENST00000458362 KIAA1109Q2LD37 5005 aa10.48□□□□□ -0.73
CRAT-207ENST00000458362 S4R3F8 94 aa10.47□□□□□ -0.73
CRAT-207ENST00000458362 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.73
CRAT-207ENST00000458362 KRTAP13-4Q3LI77 160 aa10.43□□□□□ -0.74
CRAT-207ENST00000458362 K7ERS5 55 aa10.36□□□□□ -0.75
CRAT-207ENST00000458362 P0C880 135 aa10.32□□□□□ -0.76
CRAT-207ENST00000458362 KRTAP25-1Q3LHN0 102 aa10.32□□□□□ -0.76
CRAT-207ENST00000458362 A0A0D9SG42 100 aa10.31□□□□□ -0.76
CRAT-207ENST00000458362 TPRXLQ17RH7 258 aa10.26□□□□□ -0.77
CRAT-207ENST00000458362 LPAP08519 4548 aa10.25□□□□□ -0.77
CRAT-207ENST00000458362 CRIPTQ9P021 101 aa10.24□□□□□ -0.77
CRAT-207ENST00000458362 EPPK1P58107 5090 aaKnown RBP10.23□□□□□ -0.77
CRAT-207ENST00000458362 LRP2P98164 4655 aa10.23□□□□□ -0.77
CRAT-207ENST00000458362 ROMO1P60602 79 aa10.19□□□□□ -0.78
CRAT-207ENST00000458362 KRTAP4-5Q9BYR2 181 aa10.09□□□□□ -0.79
CRAT-207ENST00000458362 ABCA13Q86UQ4 5058 aa10.07□□□□□ -0.8
CRAT-207ENST00000458362 KRTAP12-2P59991 146 aa10.07□□□□□ -0.8
CRAT-207ENST00000458362 KRTAP12-1P59990 96 aa9.99□□□□□ -0.81
CRAT-207ENST00000458362 SPINT4Q6UDR6 99 aa9.94□□□□□ -0.82
CRAT-207ENST00000458362 M0QZ58 72 aa9.91□□□□□ -0.82
CRAT-207ENST00000458362 C10orf95Q9H7T3 257 aa9.89□□□□□ -0.83
CRAT-207ENST00000458362 SEC61BP60468 96 aaKnown RBP9.85□□□□□ -0.83
CRAT-207ENST00000458362 MUC17Q685J3 4493 aa9.83□□□□□ -0.84
CRAT-207ENST00000458362 KRTAP4-1Q9BYQ7 146 aa9.82□□□□□ -0.84
CRAT-207ENST00000458362 HERC2O95714 4834 aa9.72□□□□□ -0.85
CRAT-207ENST00000458362 LORP23490 312 aaPredicted RBP9.69□□□□□ -0.86
CRAT-207ENST00000458362 R4GN34 69 aa9.69□□□□□ -0.86
CRAT-207ENST00000458362 J3QL48 77 aa9.68□□□□□ -0.86
CRAT-207ENST00000458362 KRTAP19-2Q3LHN2 52 aa9.64□□□□□ -0.87
CRAT-207ENST00000458362 H3BS24 57 aa9.52□□□□□ -0.89
CRAT-207ENST00000458362 BIRC6Q9NR09 4857 aa9.45□□□□□ -0.9
CRAT-207ENST00000458362 KRTAP15-1Q3LI76 137 aa9.43□□□□□ -0.9
CRAT-207ENST00000458362 FLGP20930 4061 aaPredicted RBP9.4□□□□□ -0.91
CRAT-207ENST00000458362 MUC2Q02817 5179 aa9.37□□□□□ -0.91
CRAT-207ENST00000458362 HERC1Q15751 4861 aa9.21□□□□□ -0.94
CRAT-207ENST00000458362 CAMK2N1Q7Z7J9 78 aa9.2□□□□□ -0.94
CRAT-207ENST00000458362 HMCN2Q8NDA2 5059 aa9.19□□□□□ -0.94
CRAT-207ENST00000458362 PCLOQ9Y6V0 5065 aa9.17□□□□□ -0.94
CRAT-207ENST00000458362 NDUFAF8A1L188 74 aa9.15□□□□□ -0.95
CRAT-207ENST00000458362 LCE2CQ5TA81 110 aa9.06□□□□□ -0.96
CRAT-207ENST00000458362 PLAC4Q8WY50 150 aa9.02□□□□□ -0.97
CRAT-207ENST00000458362 PP632Q6XCG6 107 aa8.98□□□□□ -0.97
CRAT-207ENST00000458362 FAT4Q6V0I7 4981 aa8.93□□□□□ -0.98
CRAT-207ENST00000458362 TNP1P09430 55 aa8.84□□□□□ -0.99
CRAT-207ENST00000458362 SPRR2GQ9BYE4 73 aa8.83□□□□□ -1
CRAT-207ENST00000458362 KRTAP19-1Q8IUB9 90 aa8.83□□□□□ -1
CRAT-207ENST00000458362 MT1HP80294 61 aa8.79□□□□□ -1
CRAT-207ENST00000458362 RNF213Q63HN8 5207 aa8.78□□□□□ -1
CRAT-207ENST00000458362 M0R2T5 61 aa8.77□□□□□ -1.01
CRAT-207ENST00000458362 UBR4Q5T4S7 5183 aa8.75□□□□□ -1.01
CRAT-207ENST00000458362 KRTAP23-1A1A580 65 aa8.73□□□□□ -1.01
CRAT-207ENST00000458362 MT1FP04733 61 aa8.67□□□□□ -1.02
CRAT-207ENST00000458362 MT2AP02795 61 aa8.66□□□□□ -1.02
CRAT-207ENST00000458362 KRTAP10-10P60014 251 aa8.61□□□□□ -1.03
CRAT-207ENST00000458362 KRTAP9-8Q9BYQ0 159 aa8.6□□□□□ -1.03
CRAT-207ENST00000458362 LUZP6Q538Z0 58 aa8.51□□□□□ -1.05
CRAT-207ENST00000458362 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.05
CRAT-207ENST00000458362 LCE3AQ5TA76 89 aa8.45□□□□□ -1.06
CRAT-207ENST00000458362 SPRR5A0A1B0GTR4 108 aa8.43□□□□□ -1.06
CRAT-207ENST00000458362 MT1BP07438 61 aa8.38□□□□□ -1.07
CRAT-207ENST00000458362 KRTAP10-5P60370 271 aa8.32□□□□□ -1.08
CRAT-207ENST00000458362 MT1XP80297 61 aa8.31□□□□□ -1.08
CRAT-207ENST00000458362 KRTAP9-3Q9BYQ3 159 aa8.23□□□□□ -1.09
CRAT-207ENST00000458362 KRTAP8-1Q8IUC2 63 aa8.21□□□□□ -1.1
CRAT-207ENST00000458362 KRTAP10-12P60413 245 aa8.1□□□□□ -1.11
CRAT-207ENST00000458362 KRTAP10-7P60409 375 aaPredicted RBP8.08□□□□□ -1.12
CRAT-207ENST00000458362 A0A0A0MQY5 61 aa8.04□□□□□ -1.12
CRAT-207ENST00000458362 KRTAP12-3P60328 96 aa8.02□□□□□ -1.13
CRAT-207ENST00000458362 PRO2289Q9P1D8 64 aa7.94□□□□□ -1.14
CRAT-207ENST00000458362 LCE2BO14633 110 aa7.93□□□□□ -1.14
CRAT-207ENST00000458362 LCE2AQ5TA79 106 aaPredicted RBP7.86□□□□□ -1.15
CRAT-207ENST00000458362 KRTAP19-5Q3LI72 72 aa7.73□□□□□ -1.17
CRAT-207ENST00000458362 USH2AO75445 5202 aa7.7□□□□□ -1.18
CRAT-207ENST00000458362 KRTAP4-8A0A0G2JLE6 195 aa7.59□□□□□ -1.19
CRAT-207ENST00000458362 KRTAP4-8Q9BYQ9 185 aa7.59□□□□□ -1.19
CRAT-207ENST00000458362 KMT2DO14686 5537 aa7.58□□□□□ -1.2
CRAT-207ENST00000458362 LCE3CQ5T5A8 94 aa7.56□□□□□ -1.2
CRAT-207ENST00000458362 KRTAP19-7Q3SYF9 63 aa7.4□□□□□ -1.22
CRAT-207ENST00000458362 KRTAP9-6A8MVA2 160 aa7.34□□□□□ -1.23
CRAT-207ENST00000458362 INE1O15225 51 aa7.31□□□□□ -1.24
CRAT-207ENST00000458362 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
CRAT-207ENST00000458362 KRTAP4-7Q9BYR0 210 aa7.27□□□□□ -1.24
CRAT-207ENST00000458362 KRTAP19-4Q3LI73 84 aa7.23□□□□□ -1.25
CRAT-207ENST00000458362 MT1EP04732 61 aa7.18□□□□□ -1.26
CRAT-207ENST00000458362 MT1LQ93083 61 aa7.18□□□□□ -1.26
CRAT-207ENST00000458362 KRTAP19-6Q3LI70 58 aa7.16□□□□□ -1.26
CRAT-207ENST00000458362 KRTAP2-3P0C7H8 128 aa7.03□□□□□ -1.28
CRAT-207ENST00000458362 KRTAP2-4Q9BYR9 128 aa7.03□□□□□ -1.28
CRAT-207ENST00000458362 KRTAP2-1Q9BYU5 128 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms