RNA–Protein interactions for RNA: ENST00000458291.6

CAGE1-205, Transcript of cancer antigen 1, humanhuman

TSL 1 (best)

Gene CAGE1, Length 2,989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-205ENST00000458291 TYMSOSQ8TAI1 123 aa3.32□□□□□ -1.88
CAGE1-205ENST00000458291 IGKV2D-30A0A075B6S6 120 aa3.32□□□□□ -1.88
CAGE1-205ENST00000458291 J3QL48 77 aa3.31□□□□□ -1.88
CAGE1-205ENST00000458291 MYCBP2O75592 4640 aa3.31□□□□□ -1.88
CAGE1-205ENST00000458291 LOC100996750A0A140TA64 210 aa3.3□□□□□ -1.88
CAGE1-205ENST00000458291 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
CAGE1-205ENST00000458291 A8MUU9 505 aa3.28□□□□□ -1.88
CAGE1-205ENST00000458291 H0YAA0 97 aa3.28□□□□□ -1.88
CAGE1-205ENST00000458291 LINC00304Q8N9R0 145 aa3.28□□□□□ -1.88
CAGE1-205ENST00000458291 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
CAGE1-205ENST00000458291 VPS13BQ7Z7G8 4022 aa3.23□□□□□ -1.89
CAGE1-205ENST00000458291 ROMO1P60602 79 aa3.22□□□□□ -1.89
CAGE1-205ENST00000458291 C20orf166-AS1Q96NR2 134 aa3.22□□□□□ -1.89
CAGE1-205ENST00000458291 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
CAGE1-205ENST00000458291 A0A1B0GU33 70 aa3.2□□□□□ -1.9
CAGE1-205ENST00000458291 H1FX-AS1Q4G0G2 97 aa3.2□□□□□ -1.9
CAGE1-205ENST00000458291 KRTAP3-1Q9BYR8 98 aa3.18□□□□□ -1.9
CAGE1-205ENST00000458291 CRIPTQ9P021 101 aa3.16□□□□□ -1.9
CAGE1-205ENST00000458291 UBR4Q5T4S7 5183 aa3.16□□□□□ -1.9
CAGE1-205ENST00000458291 C9orf92A6NGG3 77 aa3.15□□□□□ -1.9
CAGE1-205ENST00000458291 P0C880 135 aa3.15□□□□□ -1.91
CAGE1-205ENST00000458291 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.91
CAGE1-205ENST00000458291 COX6B2Q6YFQ2 88 aa3.13□□□□□ -1.91
CAGE1-205ENST00000458291 FAT3Q8TDW7 4589 aa3.12□□□□□ -1.91
CAGE1-205ENST00000458291 K7ERS5 55 aa3.12□□□□□ -1.91
CAGE1-205ENST00000458291 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
CAGE1-205ENST00000458291 LRP2P98164 4655 aa3.11□□□□□ -1.91
CAGE1-205ENST00000458291 MT1HL1P0DM35 61 aa3.09□□□□□ -1.91
CAGE1-205ENST00000458291 PKHD1L1Q86WI1 4243 aa3.09□□□□□ -1.91
CAGE1-205ENST00000458291 RNF213Q63HN8 5207 aa3.09□□□□□ -1.91
CAGE1-205ENST00000458291 TPRXLQ17RH7 258 aa3.07□□□□□ -1.92
CAGE1-205ENST00000458291 KRTAP13-4Q3LI77 160 aa3.07□□□□□ -1.92
CAGE1-205ENST00000458291 KRTAP10-6P60371 365 aaPredicted RBP3.06□□□□□ -1.92
CAGE1-205ENST00000458291 RPL37P61927 97 aaKnown RBP3.06□□□□□ -1.92
CAGE1-205ENST00000458291 KRTAP10-8P60410 259 aa3.06□□□□□ -1.92
CAGE1-205ENST00000458291 SPINT4Q6UDR6 99 aa3.04□□□□□ -1.92
CAGE1-205ENST00000458291 A0A0D9SG42 100 aa3.03□□□□□ -1.92
CAGE1-205ENST00000458291 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
CAGE1-205ENST00000458291 KRTAP15-1Q3LI76 137 aa3.02□□□□□ -1.93
CAGE1-205ENST00000458291 S4R3F8 94 aa3.01□□□□□ -1.93
CAGE1-205ENST00000458291 TNXBP22105 4242 aa3□□□□□ -1.93
CAGE1-205ENST00000458291 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
CAGE1-205ENST00000458291 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
CAGE1-205ENST00000458291 LPAP08519 4548 aa2.96□□□□□ -1.94
CAGE1-205ENST00000458291 MUC2Q02817 5179 aa2.96□□□□□ -1.94
CAGE1-205ENST00000458291 KRTAP12-1P59990 96 aa2.94□□□□□ -1.94
CAGE1-205ENST00000458291 M0QZ58 72 aa2.92□□□□□ -1.94
CAGE1-205ENST00000458291 LCE2AQ5TA79 106 aaPredicted RBP2.88□□□□□ -1.95
CAGE1-205ENST00000458291 LCE2BO14633 110 aa2.87□□□□□ -1.95
CAGE1-205ENST00000458291 KRTAP4-8Q9BYQ9 185 aa2.86□□□□□ -1.95
CAGE1-205ENST00000458291 SEC61BP60468 96 aaKnown RBP2.85□□□□□ -1.95
CAGE1-205ENST00000458291 FAT4Q6V0I7 4981 aa2.84□□□□□ -1.96
CAGE1-205ENST00000458291 R4GN34 69 aa2.81□□□□□ -1.96
CAGE1-205ENST00000458291 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
CAGE1-205ENST00000458291 FSIP2Q5CZC0 6907 aa2.78□□□□□ -1.96
CAGE1-205ENST00000458291 PLAC4Q8WY50 150 aa2.78□□□□□ -1.96
CAGE1-205ENST00000458291 KRTAP9-2Q9BYQ4 174 aa2.77□□□□□ -1.97
CAGE1-205ENST00000458291 A0A0A0MQY5 61 aa2.76□□□□□ -1.97
CAGE1-205ENST00000458291 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
CAGE1-205ENST00000458291 KRTAP4-1Q9BYQ7 146 aa2.73□□□□□ -1.97
CAGE1-205ENST00000458291 M0R2T5 61 aa2.72□□□□□ -1.97
CAGE1-205ENST00000458291 LORP23490 312 aaPredicted RBP2.72□□□□□ -1.97
CAGE1-205ENST00000458291 KRTAP4-8A0A0G2JLE6 195 aa2.7□□□□□ -1.98
CAGE1-205ENST00000458291 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
CAGE1-205ENST00000458291 MUC17Q685J3 4493 aa2.68□□□□□ -1.98
CAGE1-205ENST00000458291 KRTAP9-6A0A140TA67 174 aa2.68□□□□□ -1.98
CAGE1-205ENST00000458291 KRTAP4-7Q9BYR0 210 aa2.67□□□□□ -1.98
CAGE1-205ENST00000458291 CAMK2N1Q7Z7J9 78 aa2.67□□□□□ -1.98
CAGE1-205ENST00000458291 KRTAP19-2Q3LHN2 52 aa2.66□□□□□ -1.98
CAGE1-205ENST00000458291 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.65□□□□□ -1.98
CAGE1-205ENST00000458291 LCE3BQ5TA77 95 aa2.64□□□□□ -1.99
CAGE1-205ENST00000458291 LCE2CQ5TA81 110 aa2.64□□□□□ -1.99
CAGE1-205ENST00000458291 MT1HP80294 61 aa2.64□□□□□ -1.99
CAGE1-205ENST00000458291 CRCT1Q9UGL9 99 aa2.62□□□□□ -1.99
CAGE1-205ENST00000458291 KRTAP23-1A1A580 65 aa2.61□□□□□ -1.99
CAGE1-205ENST00000458291 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
CAGE1-205ENST00000458291 FLGP20930 4061 aaPredicted RBP2.6□□□□□ -1.99
CAGE1-205ENST00000458291 TNP1P09430 55 aa2.59□□□□□ -2
CAGE1-205ENST00000458291 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
CAGE1-205ENST00000458291 LCE1DQ5T752 114 aa2.55□□□□□ -2
CAGE1-205ENST00000458291 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
CAGE1-205ENST00000458291 KRTAP9-4Q9BYQ2 154 aa2.55□□□□□ -2
CAGE1-205ENST00000458291 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
CAGE1-205ENST00000458291 SPRR2GQ9BYE4 73 aa2.52□□□□□ -2.01
CAGE1-205ENST00000458291 USH2AO75445 5202 aa2.52□□□□□ -2.01
CAGE1-205ENST00000458291 KRTAP10-10P60014 251 aa2.5□□□□□ -2.01
CAGE1-205ENST00000458291 KRTAP9-8Q9BYQ0 159 aa2.49□□□□□ -2.01
CAGE1-205ENST00000458291 KRTAP5-3Q6L8H2 238 aa2.49□□□□□ -2.01
CAGE1-205ENST00000458291 SSPOA2VEC9 5147 aa2.48□□□□□ -2.01
CAGE1-205ENST00000458291 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
CAGE1-205ENST00000458291 KRTAP19-1Q8IUB9 90 aa2.46□□□□□ -2.02
CAGE1-205ENST00000458291 MT2AP02795 61 aa2.46□□□□□ -2.02
CAGE1-205ENST00000458291 PRO2289Q9P1D8 64 aa2.44□□□□□ -2.02
CAGE1-205ENST00000458291 MT1FP04733 61 aa2.43□□□□□ -2.02
CAGE1-205ENST00000458291 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
CAGE1-205ENST00000458291 KRTAP9-7A8MTY7 169 aa2.43□□□□□ -2.02
CAGE1-205ENST00000458291 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
CAGE1-205ENST00000458291 KRTAP19-8Q3LI54 63 aa2.4□□□□□ -2.02
CAGE1-205ENST00000458291 KRTAP9-3Q9BYQ3 159 aa2.4□□□□□ -2.03
CAGE1-205ENST00000458291 INE1O15225 51 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms