RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 CSAG1Q6PB30 78 aa6.72□□□□□ -1.33
LINC00959-201ENST00000456581 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
LINC00959-201ENST00000456581 HERC2O95714 4834 aa6.67□□□□□ -1.34
LINC00959-201ENST00000456581 H0YAA0 97 aa6.66□□□□□ -1.34
LINC00959-201ENST00000456581 KRTAP10-8P60410 259 aa6.65□□□□□ -1.35
LINC00959-201ENST00000456581 H3BS24 57 aa6.63□□□□□ -1.35
LINC00959-201ENST00000456581 CRIPTQ9P021 101 aa6.63□□□□□ -1.35
LINC00959-201ENST00000456581 A8MUU9 505 aa6.61□□□□□ -1.35
LINC00959-201ENST00000456581 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
LINC00959-201ENST00000456581 MT1HL1P0DM35 61 aa6.56□□□□□ -1.36
LINC00959-201ENST00000456581 KRTAP4-5Q9BYR2 181 aa6.56□□□□□ -1.36
LINC00959-201ENST00000456581 ABCA13Q86UQ4 5058 aa6.54□□□□□ -1.36
LINC00959-201ENST00000456581 A0A1B0GU33 70 aa6.52□□□□□ -1.37
LINC00959-201ENST00000456581 LRP2P98164 4655 aa6.51□□□□□ -1.37
LINC00959-201ENST00000456581 LPAP08519 4548 aa6.49□□□□□ -1.37
LINC00959-201ENST00000456581 H1FX-AS1Q4G0G2 97 aa6.48□□□□□ -1.37
LINC00959-201ENST00000456581 XP32Q5T750 250 aa6.44□□□□□ -1.38
LINC00959-201ENST00000456581 COX6B2Q6YFQ2 88 aa6.43□□□□□ -1.38
LINC00959-201ENST00000456581 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
LINC00959-201ENST00000456581 KRTAP13-4Q3LI77 160 aa6.4□□□□□ -1.38
LINC00959-201ENST00000456581 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
LINC00959-201ENST00000456581 A0A0D9SG42 100 aa6.38□□□□□ -1.39
LINC00959-201ENST00000456581 ROMO1P60602 79 aa6.37□□□□□ -1.39
LINC00959-201ENST00000456581 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
LINC00959-201ENST00000456581 KRTAP10-6P60371 365 aaPredicted RBP6.33□□□□□ -1.4
LINC00959-201ENST00000456581 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
LINC00959-201ENST00000456581 PCLOQ9Y6V0 5065 aa6.28□□□□□ -1.4
LINC00959-201ENST00000456581 P0C880 135 aa6.27□□□□□ -1.41
LINC00959-201ENST00000456581 KRTAP3-2Q9BYR7 98 aa6.27□□□□□ -1.41
LINC00959-201ENST00000456581 K7ERS5 55 aa6.27□□□□□ -1.41
LINC00959-201ENST00000456581 TPRXLQ17RH7 258 aa6.24□□□□□ -1.41
LINC00959-201ENST00000456581 S4R3F8 94 aa6.22□□□□□ -1.41
LINC00959-201ENST00000456581 HERC1Q15751 4861 aa6.2□□□□□ -1.42
LINC00959-201ENST00000456581 J3QL48 77 aa6.2□□□□□ -1.42
LINC00959-201ENST00000456581 MUC2Q02817 5179 aa6.17□□□□□ -1.42
LINC00959-201ENST00000456581 KRTAP12-2P59991 146 aa6.16□□□□□ -1.42
LINC00959-201ENST00000456581 SPINT4Q6UDR6 99 aa6.15□□□□□ -1.43
LINC00959-201ENST00000456581 MUC17Q685J3 4493 aa6.1□□□□□ -1.43
LINC00959-201ENST00000456581 KRTAP4-1Q9BYQ7 146 aa6.09□□□□□ -1.43
LINC00959-201ENST00000456581 KRTAP12-1P59990 96 aa6.03□□□□□ -1.44
LINC00959-201ENST00000456581 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
LINC00959-201ENST00000456581 HMCN2Q8NDA2 5059 aa5.99□□□□□ -1.45
LINC00959-201ENST00000456581 NDUFAF8A1L188 74 aa5.97□□□□□ -1.45
LINC00959-201ENST00000456581 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.46
LINC00959-201ENST00000456581 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.47
LINC00959-201ENST00000456581 FAT4Q6V0I7 4981 aa5.89□□□□□ -1.47
LINC00959-201ENST00000456581 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
LINC00959-201ENST00000456581 M0QZ58 72 aa5.88□□□□□ -1.47
LINC00959-201ENST00000456581 KRTAP19-2Q3LHN2 52 aa5.88□□□□□ -1.47
LINC00959-201ENST00000456581 UBR4Q5T4S7 5183 aa5.85□□□□□ -1.47
LINC00959-201ENST00000456581 FLGP20930 4061 aaPredicted RBP5.82□□□□□ -1.48
LINC00959-201ENST00000456581 R4GN34 69 aa5.81□□□□□ -1.48
LINC00959-201ENST00000456581 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
LINC00959-201ENST00000456581 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
LINC00959-201ENST00000456581 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
LINC00959-201ENST00000456581 M0R2T5 61 aa5.51□□□□□ -1.53
LINC00959-201ENST00000456581 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
LINC00959-201ENST00000456581 MT1HP80294 61 aa5.5□□□□□ -1.53
LINC00959-201ENST00000456581 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
LINC00959-201ENST00000456581 LUZP6Q538Z0 58 aa5.44□□□□□ -1.54
LINC00959-201ENST00000456581 MT1FP04733 61 aa5.37□□□□□ -1.55
LINC00959-201ENST00000456581 MT2AP02795 61 aa5.35□□□□□ -1.55
LINC00959-201ENST00000456581 KRTAP19-1Q8IUB9 90 aa5.35□□□□□ -1.55
LINC00959-201ENST00000456581 KRTAP10-10P60014 251 aa5.34□□□□□ -1.55
LINC00959-201ENST00000456581 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
LINC00959-201ENST00000456581 PP632Q6XCG6 107 aa5.3□□□□□ -1.56
LINC00959-201ENST00000456581 LCE2DQ5TA82 110 aaPredicted RBP5.29□□□□□ -1.56
LINC00959-201ENST00000456581 SPRR2GQ9BYE4 73 aa5.29□□□□□ -1.56
LINC00959-201ENST00000456581 TNP1P09430 55 aa5.26□□□□□ -1.57
LINC00959-201ENST00000456581 USH2AO75445 5202 aa5.15□□□□□ -1.59
LINC00959-201ENST00000456581 KRTAP9-3Q9BYQ3 159 aa5.12□□□□□ -1.59
LINC00959-201ENST00000456581 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
LINC00959-201ENST00000456581 MT1BP07438 61 aa5.11□□□□□ -1.59
LINC00959-201ENST00000456581 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
LINC00959-201ENST00000456581 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.6
LINC00959-201ENST00000456581 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
LINC00959-201ENST00000456581 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
LINC00959-201ENST00000456581 LCE2BO14633 110 aa5.01□□□□□ -1.61
LINC00959-201ENST00000456581 MT1XP80297 61 aa5.01□□□□□ -1.61
LINC00959-201ENST00000456581 KRTAP10-5P60370 271 aa5□□□□□ -1.61
LINC00959-201ENST00000456581 KMT2DO14686 5537 aa4.96□□□□□ -1.62
LINC00959-201ENST00000456581 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
LINC00959-201ENST00000456581 FSIP2Q5CZC0 6907 aa4.9□□□□□ -1.62
LINC00959-201ENST00000456581 KRTAP10-7P60409 375 aaPredicted RBP4.89□□□□□ -1.63
LINC00959-201ENST00000456581 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
LINC00959-201ENST00000456581 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
LINC00959-201ENST00000456581 KRTAP8-1Q8IUC2 63 aa4.82□□□□□ -1.64
LINC00959-201ENST00000456581 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
LINC00959-201ENST00000456581 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
LINC00959-201ENST00000456581 SSPOA2VEC9 5147 aa4.78□□□□□ -1.64
LINC00959-201ENST00000456581 INE1O15225 51 aa4.74□□□□□ -1.65
LINC00959-201ENST00000456581 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
LINC00959-201ENST00000456581 KRTAP4-8A0A0G2JLE6 195 aa4.7□□□□□ -1.66
LINC00959-201ENST00000456581 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
LINC00959-201ENST00000456581 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
LINC00959-201ENST00000456581 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
LINC00959-201ENST00000456581 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
LINC00959-201ENST00000456581 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
LINC00959-201ENST00000456581 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
LINC00959-201ENST00000456581 FCGBPQ9Y6R7 5405 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms