RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 MYCBP2O75592 4640 aa9.78□□□□□ -0.84
SEMA3B-209ENST00000456560 H3BS24 57 aa9.78□□□□□ -0.84
SEMA3B-209ENST00000456560 FAT3Q8TDW7 4589 aa9.78□□□□□ -0.84
SEMA3B-209ENST00000456560 TNXBP22105 4242 aa9.77□□□□□ -0.85
SEMA3B-209ENST00000456560 CSAG1Q6PB30 78 aa9.72□□□□□ -0.85
SEMA3B-209ENST00000456560 HERC2O95714 4834 aa9.7□□□□□ -0.86
SEMA3B-209ENST00000456560 ABCA13Q86UQ4 5058 aa9.69□□□□□ -0.86
SEMA3B-209ENST00000456560 H0YAA0 97 aa9.66□□□□□ -0.86
SEMA3B-209ENST00000456560 COX6B2Q6YFQ2 88 aa9.65□□□□□ -0.86
SEMA3B-209ENST00000456560 A0A0A0MQY5 61 aa9.63□□□□□ -0.87
SEMA3B-209ENST00000456560 J3QL48 77 aa9.63□□□□□ -0.87
SEMA3B-209ENST00000456560 RPL37P61927 97 aaKnown RBP9.6□□□□□ -0.87
SEMA3B-209ENST00000456560 A0A1B0GU33 70 aa9.59□□□□□ -0.87
SEMA3B-209ENST00000456560 XP32Q5T750 250 aa9.56□□□□□ -0.88
SEMA3B-209ENST00000456560 DMBT1Q9UGM3 2413 aaPredicted RBP9.56□□□□□ -0.88
SEMA3B-209ENST00000456560 MT1HL1P0DM35 61 aa9.55□□□□□ -0.88
SEMA3B-209ENST00000456560 H1FX-AS1Q4G0G2 97 aa9.54□□□□□ -0.88
SEMA3B-209ENST00000456560 PCLOQ9Y6V0 5065 aa9.43□□□□□ -0.9
SEMA3B-209ENST00000456560 KRTAP25-1Q3LHN0 102 aa9.43□□□□□ -0.9
SEMA3B-209ENST00000456560 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.9
SEMA3B-209ENST00000456560 K7ERS5 55 aa9.36□□□□□ -0.91
SEMA3B-209ENST00000456560 S4R3F8 94 aa9.29□□□□□ -0.92
SEMA3B-209ENST00000456560 TPRXLQ17RH7 258 aa9.28□□□□□ -0.92
SEMA3B-209ENST00000456560 KRTAP10-6P60371 365 aaPredicted RBP9.27□□□□□ -0.93
SEMA3B-209ENST00000456560 CRIPTQ9P021 101 aa9.26□□□□□ -0.93
SEMA3B-209ENST00000456560 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
SEMA3B-209ENST00000456560 HERC1Q15751 4861 aa9.22□□□□□ -0.93
SEMA3B-209ENST00000456560 LPAP08519 4548 aa9.19□□□□□ -0.94
SEMA3B-209ENST00000456560 ROMO1P60602 79 aa9.19□□□□□ -0.94
SEMA3B-209ENST00000456560 LRP2P98164 4655 aa9.14□□□□□ -0.95
SEMA3B-209ENST00000456560 KRTAP13-4Q3LI77 160 aa9.13□□□□□ -0.95
SEMA3B-209ENST00000456560 A0A0D9SG42 100 aa9.12□□□□□ -0.95
SEMA3B-209ENST00000456560 P0C880 135 aa9.08□□□□□ -0.96
SEMA3B-209ENST00000456560 HMCN2Q8NDA2 5059 aa8.98□□□□□ -0.97
SEMA3B-209ENST00000456560 SEC61BP60468 96 aaKnown RBP8.92□□□□□ -0.98
SEMA3B-209ENST00000456560 C10orf95Q9H7T3 257 aa8.88□□□□□ -0.99
SEMA3B-209ENST00000456560 SPINT4Q6UDR6 99 aa8.87□□□□□ -0.99
SEMA3B-209ENST00000456560 KRTAP12-2P59991 146 aa8.86□□□□□ -0.99
SEMA3B-209ENST00000456560 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
SEMA3B-209ENST00000456560 MUC17Q685J3 4493 aa8.81□□□□□ -1
SEMA3B-209ENST00000456560 M0QZ58 72 aa8.81□□□□□ -1
SEMA3B-209ENST00000456560 KRTAP12-1P59990 96 aa8.77□□□□□ -1.01
SEMA3B-209ENST00000456560 MUC2Q02817 5179 aa8.71□□□□□ -1.02
SEMA3B-209ENST00000456560 KRTAP19-2Q3LHN2 52 aa8.7□□□□□ -1.02
SEMA3B-209ENST00000456560 UBR4Q5T4S7 5183 aa8.68□□□□□ -1.02
SEMA3B-209ENST00000456560 KRTAP15-1Q3LI76 137 aa8.64□□□□□ -1.03
SEMA3B-209ENST00000456560 R4GN34 69 aa8.58□□□□□ -1.04
SEMA3B-209ENST00000456560 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
SEMA3B-209ENST00000456560 RNF213Q63HN8 5207 aa8.56□□□□□ -1.04
SEMA3B-209ENST00000456560 NDUFAF8A1L188 74 aa8.53□□□□□ -1.04
SEMA3B-209ENST00000456560 FLGP20930 4061 aaPredicted RBP8.39□□□□□ -1.07
SEMA3B-209ENST00000456560 FAT4Q6V0I7 4981 aa8.36□□□□□ -1.07
SEMA3B-209ENST00000456560 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
SEMA3B-209ENST00000456560 PLAC4Q8WY50 150 aa8.18□□□□□ -1.1
SEMA3B-209ENST00000456560 CAMK2N1Q7Z7J9 78 aa8.11□□□□□ -1.11
SEMA3B-209ENST00000456560 MT1HP80294 61 aa8.06□□□□□ -1.12
SEMA3B-209ENST00000456560 PP632Q6XCG6 107 aa8.02□□□□□ -1.13
SEMA3B-209ENST00000456560 M0R2T5 61 aa8.01□□□□□ -1.13
SEMA3B-209ENST00000456560 SPRR2GQ9BYE4 73 aa7.96□□□□□ -1.14
SEMA3B-209ENST00000456560 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
SEMA3B-209ENST00000456560 LUZP6Q538Z0 58 aa7.87□□□□□ -1.15
SEMA3B-209ENST00000456560 MT2AP02795 61 aa7.83□□□□□ -1.16
SEMA3B-209ENST00000456560 TNP1P09430 55 aa7.83□□□□□ -1.16
SEMA3B-209ENST00000456560 MT1FP04733 61 aa7.81□□□□□ -1.16
SEMA3B-209ENST00000456560 LCE2AQ5TA79 106 aaPredicted RBP7.8□□□□□ -1.16
SEMA3B-209ENST00000456560 KRTAP23-1A1A580 65 aa7.8□□□□□ -1.16
SEMA3B-209ENST00000456560 KRTAP9-8Q9BYQ0 159 aa7.79□□□□□ -1.16
SEMA3B-209ENST00000456560 KRTAP10-10P60014 251 aa7.76□□□□□ -1.17
SEMA3B-209ENST00000456560 KRTAP19-8Q3LI54 63 aa7.66□□□□□ -1.18
SEMA3B-209ENST00000456560 SPRR5A0A1B0GTR4 108 aa7.54□□□□□ -1.2
SEMA3B-209ENST00000456560 MT1BP07438 61 aa7.54□□□□□ -1.2
SEMA3B-209ENST00000456560 KRTAP9-3Q9BYQ3 159 aa7.48□□□□□ -1.21
SEMA3B-209ENST00000456560 KRTAP10-5P60370 271 aa7.45□□□□□ -1.22
SEMA3B-209ENST00000456560 LCE3AQ5TA76 89 aa7.45□□□□□ -1.22
SEMA3B-209ENST00000456560 MT1XP80297 61 aa7.44□□□□□ -1.22
SEMA3B-209ENST00000456560 LCE2BO14633 110 aa7.31□□□□□ -1.24
SEMA3B-209ENST00000456560 KRTAP8-1Q8IUC2 63 aa7.31□□□□□ -1.24
SEMA3B-209ENST00000456560 USH2AO75445 5202 aa7.29□□□□□ -1.24
SEMA3B-209ENST00000456560 LCE2DQ5TA82 110 aaPredicted RBP7.22□□□□□ -1.25
SEMA3B-209ENST00000456560 KRTAP10-12P60413 245 aa7.21□□□□□ -1.26
SEMA3B-209ENST00000456560 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
SEMA3B-209ENST00000456560 KRTAP10-7P60409 375 aaPredicted RBP7.19□□□□□ -1.26
SEMA3B-209ENST00000456560 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
SEMA3B-209ENST00000456560 KRTAP12-3P60328 96 aa7.11□□□□□ -1.27
SEMA3B-209ENST00000456560 SSPOA2VEC9 5147 aa7.04□□□□□ -1.28
SEMA3B-209ENST00000456560 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
SEMA3B-209ENST00000456560 KRTAP19-5Q3LI72 72 aa6.87□□□□□ -1.31
SEMA3B-209ENST00000456560 INE1O15225 51 aa6.84□□□□□ -1.32
SEMA3B-209ENST00000456560 KRTAP19-6Q3LI70 58 aa6.8□□□□□ -1.32
SEMA3B-209ENST00000456560 KRTAP4-8A0A0G2JLE6 195 aa6.77□□□□□ -1.33
SEMA3B-209ENST00000456560 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.33
SEMA3B-209ENST00000456560 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
SEMA3B-209ENST00000456560 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
SEMA3B-209ENST00000456560 CRCT1Q9UGL9 99 aa6.68□□□□□ -1.34
SEMA3B-209ENST00000456560 KMT2DO14686 5537 aa6.68□□□□□ -1.34
SEMA3B-209ENST00000456560 KRTAP19-7Q3SYF9 63 aa6.64□□□□□ -1.35
SEMA3B-209ENST00000456560 MACF1Q9UPN3 7388 aaKnown RBP6.47□□□□□ -1.37
SEMA3B-209ENST00000456560 MT1EP04732 61 aa6.46□□□□□ -1.38
SEMA3B-209ENST00000456560 KRTAP19-4Q3LI73 84 aa6.46□□□□□ -1.38
SEMA3B-209ENST00000456560 KRTAP9-6A0A140TA67 174 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms