RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 ADM2Q7Z4H4 148 aa7.08□□□□□ -1.28
LINC00473-202ENST00000455853 LCE2AQ5TA79 106 aaPredicted RBP7.04□□□□□ -1.28
LINC00473-202ENST00000455853 XP32Q5T750 250 aa7.04□□□□□ -1.28
LINC00473-202ENST00000455853 A8MUU9 505 aa7.03□□□□□ -1.28
LINC00473-202ENST00000455853 SMR3BP02814 79 aaPredicted RBP7.03□□□□□ -1.28
LINC00473-202ENST00000455853 C20orf166-AS1Q96NR2 134 aa7.03□□□□□ -1.28
LINC00473-202ENST00000455853 FAT1Q14517 4588 aa7.02□□□□□ -1.29
LINC00473-202ENST00000455853 Q5VSD8 79 aa6.99□□□□□ -1.29
LINC00473-202ENST00000455853 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
LINC00473-202ENST00000455853 A0A1B0GU33 70 aa6.97□□□□□ -1.29
LINC00473-202ENST00000455853 VPS13BQ7Z7G8 4022 aa6.95□□□□□ -1.3
LINC00473-202ENST00000455853 H0YAA0 97 aa6.94□□□□□ -1.3
LINC00473-202ENST00000455853 H1FX-AS1Q4G0G2 97 aa6.94□□□□□ -1.3
LINC00473-202ENST00000455853 LCE3BQ5TA77 95 aa6.93□□□□□ -1.3
LINC00473-202ENST00000455853 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
LINC00473-202ENST00000455853 K7ERS5 55 aa6.9□□□□□ -1.31
LINC00473-202ENST00000455853 KRTAP3-1Q9BYR8 98 aa6.89□□□□□ -1.31
LINC00473-202ENST00000455853 C9orf92A6NGG3 77 aa6.87□□□□□ -1.31
LINC00473-202ENST00000455853 COX6B2Q6YFQ2 88 aa6.87□□□□□ -1.31
LINC00473-202ENST00000455853 MYCBP2O75592 4640 aa6.86□□□□□ -1.31
LINC00473-202ENST00000455853 KRTAP25-1Q3LHN0 102 aa6.85□□□□□ -1.31
LINC00473-202ENST00000455853 KRTAP10-4P60372 401 aaPredicted RBP6.85□□□□□ -1.31
LINC00473-202ENST00000455853 FLG2Q5D862 2391 aaPredicted RBP6.84□□□□□ -1.31
LINC00473-202ENST00000455853 PKHD1L1Q86WI1 4243 aa6.82□□□□□ -1.32
LINC00473-202ENST00000455853 HERC1Q15751 4861 aa6.8□□□□□ -1.32
LINC00473-202ENST00000455853 KRTAP9-9Q9BYP9 154 aa6.78□□□□□ -1.32
LINC00473-202ENST00000455853 KRTAP9-4Q9BYQ2 154 aa6.78□□□□□ -1.32
LINC00473-202ENST00000455853 DMBT1Q9UGM3 2413 aaPredicted RBP6.77□□□□□ -1.33
LINC00473-202ENST00000455853 J3QL48 77 aa6.76□□□□□ -1.33
LINC00473-202ENST00000455853 LRP1Q07954 4544 aaKnown RBP6.75□□□□□ -1.33
LINC00473-202ENST00000455853 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
LINC00473-202ENST00000455853 FAT3Q8TDW7 4589 aa6.71□□□□□ -1.34
LINC00473-202ENST00000455853 ROMO1P60602 79 aa6.69□□□□□ -1.34
LINC00473-202ENST00000455853 RPL37P61927 97 aaKnown RBP6.68□□□□□ -1.34
LINC00473-202ENST00000455853 MT1HL1P0DM35 61 aa6.63□□□□□ -1.35
LINC00473-202ENST00000455853 KRTAP10-6P60371 365 aaPredicted RBP6.62□□□□□ -1.35
LINC00473-202ENST00000455853 H3BS24 57 aa6.6□□□□□ -1.35
LINC00473-202ENST00000455853 KRTAP4-12Q9BQ66 201 aa6.6□□□□□ -1.35
LINC00473-202ENST00000455853 S4R3F8 94 aa6.6□□□□□ -1.35
LINC00473-202ENST00000455853 TNXBP22105 4242 aa6.56□□□□□ -1.36
LINC00473-202ENST00000455853 KRTAP10-8P60410 259 aa6.56□□□□□ -1.36
LINC00473-202ENST00000455853 HMCN2Q8NDA2 5059 aa6.55□□□□□ -1.36
LINC00473-202ENST00000455853 KRTAP13-4Q3LI77 160 aa6.51□□□□□ -1.37
LINC00473-202ENST00000455853 A0A0D9SG42 100 aa6.48□□□□□ -1.37
LINC00473-202ENST00000455853 CRIPTQ9P021 101 aa6.48□□□□□ -1.37
LINC00473-202ENST00000455853 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.37
LINC00473-202ENST00000455853 LCE1DQ5T752 114 aa6.46□□□□□ -1.37
LINC00473-202ENST00000455853 KRTAP4-2Q9BYR5 136 aa6.43□□□□□ -1.38
LINC00473-202ENST00000455853 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
LINC00473-202ENST00000455853 P0C880 135 aa6.41□□□□□ -1.38
LINC00473-202ENST00000455853 TPRXLQ17RH7 258 aa6.41□□□□□ -1.38
LINC00473-202ENST00000455853 UBR4Q5T4S7 5183 aa6.41□□□□□ -1.38
LINC00473-202ENST00000455853 M0QZ58 72 aa6.4□□□□□ -1.38
LINC00473-202ENST00000455853 SPINT4Q6UDR6 99 aa6.39□□□□□ -1.39
LINC00473-202ENST00000455853 KRTAP9-8Q9BYQ0 159 aa6.39□□□□□ -1.39
LINC00473-202ENST00000455853 KRTAP4-9Q9BYQ8 210 aa6.39□□□□□ -1.39
LINC00473-202ENST00000455853 LRP2P98164 4655 aa6.37□□□□□ -1.39
LINC00473-202ENST00000455853 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
LINC00473-202ENST00000455853 KRTAP12-2P59991 146 aa6.34□□□□□ -1.39
LINC00473-202ENST00000455853 LPAP08519 4548 aa6.3□□□□□ -1.4
LINC00473-202ENST00000455853 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
LINC00473-202ENST00000455853 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
LINC00473-202ENST00000455853 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
LINC00473-202ENST00000455853 RNF213Q63HN8 5207 aa6.21□□□□□ -1.41
LINC00473-202ENST00000455853 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
LINC00473-202ENST00000455853 R4GN34 69 aa6.12□□□□□ -1.43
LINC00473-202ENST00000455853 NDUFAF8A1L188 74 aa6.1□□□□□ -1.43
LINC00473-202ENST00000455853 MUC2Q02817 5179 aa6.08□□□□□ -1.44
LINC00473-202ENST00000455853 SEC61BP60468 96 aaKnown RBP6.06□□□□□ -1.44
LINC00473-202ENST00000455853 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
LINC00473-202ENST00000455853 KRTAP4-11Q9BYQ6 195 aa5.99□□□□□ -1.45
LINC00473-202ENST00000455853 PP632Q6XCG6 107 aa5.97□□□□□ -1.45
LINC00473-202ENST00000455853 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
LINC00473-202ENST00000455853 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.47
LINC00473-202ENST00000455853 KRTAP4-1Q9BYQ7 146 aa5.9□□□□□ -1.47
LINC00473-202ENST00000455853 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
LINC00473-202ENST00000455853 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
LINC00473-202ENST00000455853 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
LINC00473-202ENST00000455853 LUZP6Q538Z0 58 aa5.76□□□□□ -1.49
LINC00473-202ENST00000455853 TNP1P09430 55 aa5.69□□□□□ -1.5
LINC00473-202ENST00000455853 MT1HP80294 61 aa5.64□□□□□ -1.51
LINC00473-202ENST00000455853 FLGP20930 4061 aaPredicted RBP5.62□□□□□ -1.51
LINC00473-202ENST00000455853 A0A0A0MQY5 61 aa5.61□□□□□ -1.51
LINC00473-202ENST00000455853 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
LINC00473-202ENST00000455853 M0R2T5 61 aa5.52□□□□□ -1.53
LINC00473-202ENST00000455853 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.54
LINC00473-202ENST00000455853 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
LINC00473-202ENST00000455853 FSIP2Q5CZC0 6907 aa5.38□□□□□ -1.55
LINC00473-202ENST00000455853 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
LINC00473-202ENST00000455853 MT2AP02795 61 aa5.27□□□□□ -1.57
LINC00473-202ENST00000455853 LCE3AQ5TA76 89 aa5.25□□□□□ -1.57
LINC00473-202ENST00000455853 MT1FP04733 61 aa5.23□□□□□ -1.57
LINC00473-202ENST00000455853 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
LINC00473-202ENST00000455853 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
LINC00473-202ENST00000455853 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
LINC00473-202ENST00000455853 USH2AO75445 5202 aa5.16□□□□□ -1.58
LINC00473-202ENST00000455853 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
LINC00473-202ENST00000455853 SSPOA2VEC9 5147 aa5.13□□□□□ -1.59
LINC00473-202ENST00000455853 INE1O15225 51 aa5.11□□□□□ -1.59
LINC00473-202ENST00000455853 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms