RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 FAT3Q8TDW7 4589 aa7.52□□□□□ -1.2
LINC00343-203ENST00000454555 KRTAP4-8A0A0G2JLE6 195 aa7.52□□□□□ -1.21
LINC00343-203ENST00000454555 KRTAP13-2Q52LG2 175 aa7.51□□□□□ -1.21
LINC00343-203ENST00000454555 RBM12B-AS1Q9P1G2 102 aa7.49□□□□□ -1.21
LINC00343-203ENST00000454555 LRP1Q07954 4544 aaKnown RBP7.48□□□□□ -1.21
LINC00343-203ENST00000454555 SPATA8Q6RVD6 105 aa7.47□□□□□ -1.21
LINC00343-203ENST00000454555 MYCBP2O75592 4640 aa7.47□□□□□ -1.21
LINC00343-203ENST00000454555 KRTAP10-8P60410 259 aa7.46□□□□□ -1.21
LINC00343-203ENST00000454555 FLG2Q5D862 2391 aaPredicted RBP7.46□□□□□ -1.22
LINC00343-203ENST00000454555 UQCR11O14957 56 aa7.45□□□□□ -1.22
LINC00343-203ENST00000454555 SPINK1P00995 79 aa7.45□□□□□ -1.22
LINC00343-203ENST00000454555 C4orf48Q5BLP8 95 aa7.45□□□□□ -1.22
LINC00343-203ENST00000454555 IGKV2D-30A0A075B6S6 120 aa7.44□□□□□ -1.22
LINC00343-203ENST00000454555 RPS29P62273 56 aaKnown RBP7.44□□□□□ -1.22
LINC00343-203ENST00000454555 MT1HL1P0DM35 61 aa7.43□□□□□ -1.22
LINC00343-203ENST00000454555 TYMSOSQ8TAI1 123 aa7.43□□□□□ -1.22
LINC00343-203ENST00000454555 TNXBP22105 4242 aa7.42□□□□□ -1.22
LINC00343-203ENST00000454555 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.23
LINC00343-203ENST00000454555 RETNLBQ9BQ08 111 aa7.4□□□□□ -1.23
LINC00343-203ENST00000454555 LINC00304Q8N9R0 145 aa7.34□□□□□ -1.23
LINC00343-203ENST00000454555 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
LINC00343-203ENST00000454555 KRTAP4-7Q9BYR0 210 aa7.28□□□□□ -1.24
LINC00343-203ENST00000454555 DMBT1Q9UGM3 2413 aaPredicted RBP7.24□□□□□ -1.25
LINC00343-203ENST00000454555 C20orf166-AS1Q96NR2 134 aa7.23□□□□□ -1.25
LINC00343-203ENST00000454555 A8MUU9 505 aa7.21□□□□□ -1.25
LINC00343-203ENST00000454555 HERC1Q15751 4861 aa7.21□□□□□ -1.26
LINC00343-203ENST00000454555 LCE1DQ5T752 114 aa7.2□□□□□ -1.26
LINC00343-203ENST00000454555 PRAC1Q96KF2 57 aa7.17□□□□□ -1.26
LINC00343-203ENST00000454555 LINC01554Q52M75 96 aa7.15□□□□□ -1.26
LINC00343-203ENST00000454555 HMCN2Q8NDA2 5059 aa7.14□□□□□ -1.27
LINC00343-203ENST00000454555 ADM2Q7Z4H4 148 aa7.13□□□□□ -1.27
LINC00343-203ENST00000454555 A0A1B0GU33 70 aa7.08□□□□□ -1.28
LINC00343-203ENST00000454555 H0YAA0 97 aa7.06□□□□□ -1.28
LINC00343-203ENST00000454555 H1FX-AS1Q4G0G2 97 aa7.05□□□□□ -1.28
LINC00343-203ENST00000454555 KRTAP4-9Q9BYQ8 210 aa7.04□□□□□ -1.28
LINC00343-203ENST00000454555 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
LINC00343-203ENST00000454555 C9orf92A6NGG3 77 aa7.03□□□□□ -1.28
LINC00343-203ENST00000454555 CSAG1Q6PB30 78 aa7.03□□□□□ -1.28
LINC00343-203ENST00000454555 COX6B2Q6YFQ2 88 aa7.03□□□□□ -1.28
LINC00343-203ENST00000454555 TPRXLQ17RH7 258 aa7.01□□□□□ -1.29
LINC00343-203ENST00000454555 K7ERS5 55 aa7□□□□□ -1.29
LINC00343-203ENST00000454555 KRTAP4-2Q9BYR5 136 aa6.97□□□□□ -1.29
LINC00343-203ENST00000454555 LPAP08519 4548 aa6.94□□□□□ -1.3
LINC00343-203ENST00000454555 KRTAP25-1Q3LHN0 102 aa6.92□□□□□ -1.3
LINC00343-203ENST00000454555 LRP2P98164 4655 aa6.91□□□□□ -1.3
LINC00343-203ENST00000454555 UBR4Q5T4S7 5183 aa6.84□□□□□ -1.31
LINC00343-203ENST00000454555 RPL37P61927 97 aaKnown RBP6.82□□□□□ -1.32
LINC00343-203ENST00000454555 MUC17Q685J3 4493 aa6.82□□□□□ -1.32
LINC00343-203ENST00000454555 SEC61BP60468 96 aaKnown RBP6.78□□□□□ -1.32
LINC00343-203ENST00000454555 ROMO1P60602 79 aa6.77□□□□□ -1.33
LINC00343-203ENST00000454555 KRTAP10-6P60371 365 aaPredicted RBP6.76□□□□□ -1.33
LINC00343-203ENST00000454555 RNF213Q63HN8 5207 aa6.76□□□□□ -1.33
LINC00343-203ENST00000454555 S4R3F8 94 aa6.75□□□□□ -1.33
LINC00343-203ENST00000454555 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
LINC00343-203ENST00000454555 KRTAP13-4Q3LI77 160 aa6.63□□□□□ -1.35
LINC00343-203ENST00000454555 KRTAP4-1Q9BYQ7 146 aa6.63□□□□□ -1.35
LINC00343-203ENST00000454555 MUC2Q02817 5179 aa6.61□□□□□ -1.35
LINC00343-203ENST00000454555 A0A0D9SG42 100 aa6.58□□□□□ -1.36
LINC00343-203ENST00000454555 H3BS24 57 aa6.56□□□□□ -1.36
LINC00343-203ENST00000454555 P0C880 135 aa6.55□□□□□ -1.36
LINC00343-203ENST00000454555 M0QZ58 72 aa6.54□□□□□ -1.36
LINC00343-203ENST00000454555 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
LINC00343-203ENST00000454555 KRTAP5-3Q6L8H2 238 aa6.49□□□□□ -1.37
LINC00343-203ENST00000454555 FAT4Q6V0I7 4981 aa6.47□□□□□ -1.37
LINC00343-203ENST00000454555 KRTAP12-1P59990 96 aa6.46□□□□□ -1.37
LINC00343-203ENST00000454555 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
LINC00343-203ENST00000454555 LCE4AQ5TA78 99 aa6.46□□□□□ -1.38
LINC00343-203ENST00000454555 KRTAP19-2Q3LHN2 52 aa6.44□□□□□ -1.38
LINC00343-203ENST00000454555 SPINT4Q6UDR6 99 aa6.43□□□□□ -1.38
LINC00343-203ENST00000454555 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
LINC00343-203ENST00000454555 C10orf95Q9H7T3 257 aa6.34□□□□□ -1.39
LINC00343-203ENST00000454555 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
LINC00343-203ENST00000454555 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
LINC00343-203ENST00000454555 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
LINC00343-203ENST00000454555 MT1HP80294 61 aa6.28□□□□□ -1.4
LINC00343-203ENST00000454555 R4GN34 69 aa6.26□□□□□ -1.41
LINC00343-203ENST00000454555 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.41
LINC00343-203ENST00000454555 M0R2T5 61 aa6.17□□□□□ -1.42
LINC00343-203ENST00000454555 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
LINC00343-203ENST00000454555 NDUFAF8A1L188 74 aa6.11□□□□□ -1.43
LINC00343-203ENST00000454555 PP632Q6XCG6 107 aa6.09□□□□□ -1.43
LINC00343-203ENST00000454555 KRTAP9-3Q9BYQ3 159 aa6.08□□□□□ -1.44
LINC00343-203ENST00000454555 PLAC4Q8WY50 150 aa6□□□□□ -1.45
LINC00343-203ENST00000454555 MT2AP02795 61 aa5.95□□□□□ -1.46
LINC00343-203ENST00000454555 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
LINC00343-203ENST00000454555 KRTAP23-1A1A580 65 aa5.91□□□□□ -1.46
LINC00343-203ENST00000454555 MT1FP04733 61 aa5.9□□□□□ -1.46
LINC00343-203ENST00000454555 KRTAP10-10P60014 251 aa5.88□□□□□ -1.47
LINC00343-203ENST00000454555 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
LINC00343-203ENST00000454555 TNP1P09430 55 aa5.8□□□□□ -1.48
LINC00343-203ENST00000454555 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
LINC00343-203ENST00000454555 USH2AO75445 5202 aa5.69□□□□□ -1.5
LINC00343-203ENST00000454555 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
LINC00343-203ENST00000454555 A0A0A0MQY5 61 aa5.62□□□□□ -1.51
LINC00343-203ENST00000454555 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
LINC00343-203ENST00000454555 FSIP2Q5CZC0 6907 aa5.6□□□□□ -1.51
LINC00343-203ENST00000454555 SSPOA2VEC9 5147 aa5.56□□□□□ -1.52
LINC00343-203ENST00000454555 MT1BP07438 61 aa5.53□□□□□ -1.52
LINC00343-203ENST00000454555 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
LINC00343-203ENST00000454555 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms