RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 LINC00472Q9H8W2 130 aa2.84□□□□□ -1.95
HLA-DPA3-207ENST00000454398 A0A1B0GVX0 72 aa2.83□□□□□ -1.96
HLA-DPA3-207ENST00000454398 A8MWP4 228 aa2.82□□□□□ -1.96
HLA-DPA3-207ENST00000454398 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
HLA-DPA3-207ENST00000454398 C8orf87E5RJ46 101 aa2.79□□□□□ -1.96
HLA-DPA3-207ENST00000454398 KMT2DO14686 5537 aa2.79□□□□□ -1.96
HLA-DPA3-207ENST00000454398 OCR1Q9BZK8 76 aa2.79□□□□□ -1.96
HLA-DPA3-207ENST00000454398 hDV103S1A0JD37 113 aa2.78□□□□□ -1.96
HLA-DPA3-207ENST00000454398 PSPHP1O15172 72 aa2.76□□□□□ -1.97
HLA-DPA3-207ENST00000454398 MT1BP07438 61 aa2.76□□□□□ -1.97
HLA-DPA3-207ENST00000454398 PRR15Q8IV56 129 aa2.76□□□□□ -1.97
HLA-DPA3-207ENST00000454398 C1orf64Q8NEQ6 169 aa2.76□□□□□ -1.97
HLA-DPA3-207ENST00000454398 C8orf17Q9NRJ1 99 aa2.76□□□□□ -1.97
HLA-DPA3-207ENST00000454398 A6NN06 94 aa2.75□□□□□ -1.97
HLA-DPA3-207ENST00000454398 A0A0A0MQY5 61 aa2.74□□□□□ -1.97
HLA-DPA3-207ENST00000454398 HCG22E2RYF7 251 aa2.74□□□□□ -1.97
HLA-DPA3-207ENST00000454398 H3BS24 57 aa2.74□□□□□ -1.97
HLA-DPA3-207ENST00000454398 K7EQZ3 153 aa2.74□□□□□ -1.97
HLA-DPA3-207ENST00000454398 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
HLA-DPA3-207ENST00000454398 MP68P56378 58 aa2.74□□□□□ -1.97
HLA-DPA3-207ENST00000454398 PMAIP1Q13794 54 aa2.74□□□□□ -1.97
HLA-DPA3-207ENST00000454398 Q1T7F1 81 aa2.74□□□□□ -1.97
HLA-DPA3-207ENST00000454398 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
HLA-DPA3-207ENST00000454398 IGKV2D-30A0A075B6S6 120 aa2.73□□□□□ -1.97
HLA-DPA3-207ENST00000454398 TRAV22A0A0B4J277 110 aa2.73□□□□□ -1.97
HLA-DPA3-207ENST00000454398 A8MUN3 132 aa2.73□□□□□ -1.97
HLA-DPA3-207ENST00000454398 IGKV2-30P06310 120 aa2.73□□□□□ -1.97
HLA-DPA3-207ENST00000454398 H1FX-AS1Q4G0G2 97 aa2.73□□□□□ -1.97
HLA-DPA3-207ENST00000454398 PRR15LQ9BU68 103 aa2.73□□□□□ -1.97
HLA-DPA3-207ENST00000454398 H0Y9P7 68 aa2.72□□□□□ -1.97
HLA-DPA3-207ENST00000454398 CYP4F30PQ9H0H9 118 aa2.72□□□□□ -1.97
HLA-DPA3-207ENST00000454398 MMP24-AS1A0A0U1RRL7 71 aa2.71□□□□□ -1.98
HLA-DPA3-207ENST00000454398 A0A1B0GW54 56 aa2.71□□□□□ -1.98
HLA-DPA3-207ENST00000454398 CHKB-CPT1BH3BT56 60 aa2.71□□□□□ -1.98
HLA-DPA3-207ENST00000454398 NDUFS5O43920 106 aa2.71□□□□□ -1.98
HLA-DPA3-207ENST00000454398 NDUFB1O75438 58 aa2.71□□□□□ -1.98
HLA-DPA3-207ENST00000454398 KRTAP5-9P26371 169 aa2.71□□□□□ -1.98
HLA-DPA3-207ENST00000454398 LINC00208Q96KT6 92 aa2.71□□□□□ -1.98
HLA-DPA3-207ENST00000454398 Q5VV11 94 aa2.7□□□□□ -1.98
HLA-DPA3-207ENST00000454398 SPTSSBQ8NFR3 76 aa2.7□□□□□ -1.98
HLA-DPA3-207ENST00000454398 CASC2Q6XLA1 102 aa2.69□□□□□ -1.98
HLA-DPA3-207ENST00000454398 A6NED7 52 aa2.68□□□□□ -1.98
HLA-DPA3-207ENST00000454398 A8MU10 97 aa2.68□□□□□ -1.98
HLA-DPA3-207ENST00000454398 KRTAP10-5P60370 271 aa2.68□□□□□ -1.98
HLA-DPA3-207ENST00000454398 Q5W150 140 aa2.68□□□□□ -1.98
HLA-DPA3-207ENST00000454398 MRPL34Q9BQ48 92 aaKnown RBP2.68□□□□□ -1.98
HLA-DPA3-207ENST00000454398 H3BPC8 53 aa2.67□□□□□ -1.98
HLA-DPA3-207ENST00000454398 KRTAP19-8Q3LI54 63 aa2.67□□□□□ -1.98
HLA-DPA3-207ENST00000454398 C7orf65Q6ZTY9 151 aa2.67□□□□□ -1.98
HLA-DPA3-207ENST00000454398 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
HLA-DPA3-207ENST00000454398 COA5Q86WW8 74 aa2.67□□□□□ -1.98
HLA-DPA3-207ENST00000454398 SPANXA2-OT1Q8N9U9 137 aa2.66□□□□□ -1.98
HLA-DPA3-207ENST00000454398 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
HLA-DPA3-207ENST00000454398 SPRR2GQ9BYE4 73 aa2.65□□□□□ -1.99
HLA-DPA3-207ENST00000454398 LOC100996750A0A140TA64 210 aa2.63□□□□□ -1.99
HLA-DPA3-207ENST00000454398 LOC101927531A0A1B0GV80 90 aa2.63□□□□□ -1.99
HLA-DPA3-207ENST00000454398 LCA10Q71F78 164 aa2.63□□□□□ -1.99
HLA-DPA3-207ENST00000454398 KRTAP4-6Q9BYQ5 205 aa2.63□□□□□ -1.99
HLA-DPA3-207ENST00000454398 KRTAP3-1Q9BYR8 98 aa2.63□□□□□ -1.99
HLA-DPA3-207ENST00000454398 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
HLA-DPA3-207ENST00000454398 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
HLA-DPA3-207ENST00000454398 S4R3F8 94 aa2.63□□□□□ -1.99
HLA-DPA3-207ENST00000454398 SPRR2EP22531 72 aa2.62□□□□□ -1.99
HLA-DPA3-207ENST00000454398 SPRR2BP35325 72 aa2.62□□□□□ -1.99
HLA-DPA3-207ENST00000454398 SPRR2AP35326 72 aa2.62□□□□□ -1.99
HLA-DPA3-207ENST00000454398 SPRR2FQ96RM1 72 aa2.62□□□□□ -1.99
HLA-DPA3-207ENST00000454398 CDC42SE1Q9NRR8 79 aa2.62□□□□□ -1.99
HLA-DPA3-207ENST00000454398 LINC01558Q9Y6Z2 57 aa2.6□□□□□ -1.99
HLA-DPA3-207ENST00000454398 CSAG1Q6PB30 78 aa2.58□□□□□ -2
HLA-DPA3-207ENST00000454398 TP53AIP1Q9HCN2 124 aa2.58□□□□□ -2
HLA-DPA3-207ENST00000454398 KRTAP3-3Q9BYR6 98 aa2.57□□□□□ -2
HLA-DPA3-207ENST00000454398 LCE1AQ5T7P2 110 aa2.56□□□□□ -2
HLA-DPA3-207ENST00000454398 PRAC1Q96KF2 57 aa2.56□□□□□ -2
HLA-DPA3-207ENST00000454398 MT1XP80297 61 aa2.54□□□□□ -2
HLA-DPA3-207ENST00000454398 KRTAP8-1Q8IUC2 63 aa2.54□□□□□ -2
HLA-DPA3-207ENST00000454398 SPRR2DP22532 72 aa2.53□□□□□ -2
HLA-DPA3-207ENST00000454398 KRTAP4-8A0A0G2JLE6 195 aa2.52□□□□□ -2.01
HLA-DPA3-207ENST00000454398 A0A1B0GU69 56 aa2.52□□□□□ -2.01
HLA-DPA3-207ENST00000454398 ACYP2P14621 99 aa2.52□□□□□ -2.01
HLA-DPA3-207ENST00000454398 KRTAP4-8Q9BYQ9 185 aa2.52□□□□□ -2.01
HLA-DPA3-207ENST00000454398 ADM2Q7Z4H4 148 aa2.51□□□□□ -2.01
HLA-DPA3-207ENST00000454398 MIR22HGQ0VDD5 57 aa2.49□□□□□ -2.01
HLA-DPA3-207ENST00000454398 LINC01554Q52M75 96 aa2.48□□□□□ -2.01
HLA-DPA3-207ENST00000454398 DMAC1Q96GE9 116 aa2.48□□□□□ -2.01
HLA-DPA3-207ENST00000454398 CRIPTQ9P021 101 aa2.48□□□□□ -2.01
HLA-DPA3-207ENST00000454398 PRO2289Q9P1D8 64 aa2.47□□□□□ -2.01
HLA-DPA3-207ENST00000454398 UQCR11O14957 56 aa2.46□□□□□ -2.02
HLA-DPA3-207ENST00000454398 LCE3BQ5TA77 95 aa2.46□□□□□ -2.02
HLA-DPA3-207ENST00000454398 SPATA8Q6RVD6 105 aa2.46□□□□□ -2.02
HLA-DPA3-207ENST00000454398 KRTAP10-7P60409 375 aaPredicted RBP2.44□□□□□ -2.02
HLA-DPA3-207ENST00000454398 KRTAP12-2P59991 146 aa2.43□□□□□ -2.02
HLA-DPA3-207ENST00000454398 P0C880 135 aa2.42□□□□□ -2.02
HLA-DPA3-207ENST00000454398 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
HLA-DPA3-207ENST00000454398 KRTAP23-1A1A580 65 aa2.41□□□□□ -2.02
HLA-DPA3-207ENST00000454398 H0YAA0 97 aa2.41□□□□□ -2.02
HLA-DPA3-207ENST00000454398 KRTAP3-2Q9BYR7 98 aa2.41□□□□□ -2.02
HLA-DPA3-207ENST00000454398 DSTQ03001 7570 aaKnown RBP2.41□□□□□ -2.02
HLA-DPA3-207ENST00000454398 M0QZ58 72 aa2.4□□□□□ -2.03
HLA-DPA3-207ENST00000454398 R4GN34 69 aa2.39□□□□□ -2.03
HLA-DPA3-207ENST00000454398 KRTAP4-9Q9BYQ8 210 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms