RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 TEN1Q86WV5 123 aa1.89□□□□□ -2.11
LINC00393-202ENST00000452852 ZCCHC13Q8WW36 166 aaKnown RBP1.89□□□□□ -2.11
LINC00393-202ENST00000452852 RAB37Q96AX2 223 aa1.89□□□□□ -2.11
LINC00393-202ENST00000452852 A0A087WSZ3 146 aa1.88□□□□□ -2.11
LINC00393-202ENST00000452852 H0YGX0 51 aa1.88□□□□□ -2.11
LINC00393-202ENST00000452852 KRTAP6-3Q3LI67 103 aa1.88□□□□□ -2.11
LINC00393-202ENST00000452852 PRR15Q8IV56 129 aa1.88□□□□□ -2.11
LINC00393-202ENST00000452852 H3BMG7 143 aa1.87□□□□□ -2.11
LINC00393-202ENST00000452852 COX8AP10176 69 aa1.87□□□□□ -2.11
LINC00393-202ENST00000452852 FABP2P12104 132 aa1.87□□□□□ -2.11
LINC00393-202ENST00000452852 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
LINC00393-202ENST00000452852 COA5Q86WW8 74 aa1.87□□□□□ -2.11
LINC00393-202ENST00000452852 A0A1B0GX51 115 aa1.86□□□□□ -2.11
LINC00393-202ENST00000452852 DLEU1O43261 78 aa1.86□□□□□ -2.11
LINC00393-202ENST00000452852 DNAL4O96015 105 aa1.86□□□□□ -2.11
LINC00393-202ENST00000452852 BAALC-AS2P0C853 105 aa1.86□□□□□ -2.11
LINC00393-202ENST00000452852 S100A1P23297 94 aa1.86□□□□□ -2.11
LINC00393-202ENST00000452852 C14orf144Q96I85 54 aa1.85□□□□□ -2.11
LINC00393-202ENST00000452852 VAMP8Q9BV40 100 aa1.85□□□□□ -2.11
LINC00393-202ENST00000452852 ORMDL1Q9P0S3 153 aa1.85□□□□□ -2.11
LINC00393-202ENST00000452852 HIGD1BQ9P298 99 aa1.85□□□□□ -2.11
LINC00393-202ENST00000452852 PRO1854Q9UHT4 67 aa1.85□□□□□ -2.11
LINC00393-202ENST00000452852 TRBV7-4A0A0J9YYF1 115 aa1.84□□□□□ -2.11
LINC00393-202ENST00000452852 TRACP01848 142 aa1.84□□□□□ -2.11
LINC00393-202ENST00000452852 COX6CP09669 75 aa1.84□□□□□ -2.11
LINC00393-202ENST00000452852 KRTAP13-4Q3LI77 160 aa1.84□□□□□ -2.11
LINC00393-202ENST00000452852 SPATA45Q537H7 98 aa1.84□□□□□ -2.11
LINC00393-202ENST00000452852 C14orf132Q9NPU4 83 aa1.84□□□□□ -2.11
LINC00393-202ENST00000452852 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
LINC00393-202ENST00000452852 CCKP06307 115 aa1.83□□□□□ -2.12
LINC00393-202ENST00000452852 KRTAP12-1P59990 96 aa1.83□□□□□ -2.12
LINC00393-202ENST00000452852 VPS25Q9BRG1 176 aa1.83□□□□□ -2.12
LINC00393-202ENST00000452852 LINC00846Q9NV44 126 aa1.83□□□□□ -2.12
LINC00393-202ENST00000452852 J3KT08 172 aa1.82□□□□□ -2.12
LINC00393-202ENST00000452852 SCGB1A1P11684 91 aa1.82□□□□□ -2.12
LINC00393-202ENST00000452852 ROMO1P60602 79 aa1.82□□□□□ -2.12
LINC00393-202ENST00000452852 DSCR8Q96T75 97 aa1.82□□□□□ -2.12
LINC00393-202ENST00000452852 NDUFB1O75438 58 aa1.81□□□□□ -2.12
LINC00393-202ENST00000452852 MT2AP02795 61 aa1.81□□□□□ -2.12
LINC00393-202ENST00000452852 LINC00472Q9H8W2 130 aa1.81□□□□□ -2.12
LINC00393-202ENST00000452852 MACF1Q9UPN3 7388 aaKnown RBP1.8□□□□□ -2.12
LINC00393-202ENST00000452852 RBM3P98179 157 aaKnown RBP1.8□□□□□ -2.12
LINC00393-202ENST00000452852 HSD52Q0P140 79 aa1.8□□□□□ -2.12
LINC00393-202ENST00000452852 TMEM254Q8TBM7 123 aa1.8□□□□□ -2.12
LINC00393-202ENST00000452852 C9JAW5 83 aa1.79□□□□□ -2.12
LINC00393-202ENST00000452852 MT1FP04733 61 aa1.79□□□□□ -2.12
LINC00393-202ENST00000452852 SPINK7P58062 85 aa1.79□□□□□ -2.12
LINC00393-202ENST00000452852 WFDC13Q8IUB5 93 aa1.78□□□□□ -2.12
LINC00393-202ENST00000452852 JMJD7-PLA2G4BH0Y9G9 81 aa1.77□□□□□ -2.13
LINC00393-202ENST00000452852 RPS28P62857 69 aaKnown RBP1.77□□□□□ -2.13
LINC00393-202ENST00000452852 BRK1Q8WUW1 75 aa1.77□□□□□ -2.13
LINC00393-202ENST00000452852 UQCR10Q9UDW1 63 aa1.77□□□□□ -2.13
LINC00393-202ENST00000452852 USH2AO75445 5202 aa1.77□□□□□ -2.13
LINC00393-202ENST00000452852 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
LINC00393-202ENST00000452852 IGKV3D-7A0A0C4DH55 119 aa1.76□□□□□ -2.13
LINC00393-202ENST00000452852 hDV103S1A0JD37 113 aa1.76□□□□□ -2.13
LINC00393-202ENST00000452852 PDE6GP18545 87 aa1.76□□□□□ -2.13
LINC00393-202ENST00000452852 KRTAP12-3P60328 96 aa1.76□□□□□ -2.13
LINC00393-202ENST00000452852 ATXN8Q156A1 80 aa1.76□□□□□ -2.13
LINC00393-202ENST00000452852 LOC110117498A0A087WWA1 95 aa1.75□□□□□ -2.13
LINC00393-202ENST00000452852 PYY3Q5JQD4 70 aa1.75□□□□□ -2.13
LINC00393-202ENST00000452852 M0R143 59 aa1.74□□□□□ -2.13
LINC00393-202ENST00000452852 NREPQ16612 68 aa1.74□□□□□ -2.13
LINC00393-202ENST00000452852 KRTAP19-6Q3LI70 58 aa1.74□□□□□ -2.13
LINC00393-202ENST00000452852 H1FX-AS1Q4G0G2 97 aa1.74□□□□□ -2.13
LINC00393-202ENST00000452852 MRPL34Q9BQ48 92 aaKnown RBP1.74□□□□□ -2.13
LINC00393-202ENST00000452852 SYNE2Q8WXH0 6885 aaKnown RBP1.74□□□□□ -2.13
LINC00393-202ENST00000452852 FCGBPQ9Y6R7 5405 aaPredicted RBP1.73□□□□□ -2.13
LINC00393-202ENST00000452852 MMP24-AS1A0A0U1RRL7 71 aa1.72□□□□□ -2.13
LINC00393-202ENST00000452852 NAA38Q9BRA0 125 aaKnown RBP1.72□□□□□ -2.13
LINC00393-202ENST00000452852 FAM236AA0A1B0GUQ0 79 aa1.71□□□□□ -2.14
LINC00393-202ENST00000452852 FAM236BA0A1B0GV22 79 aa1.71□□□□□ -2.14
LINC00393-202ENST00000452852 K7EQZ3 153 aa1.71□□□□□ -2.14
LINC00393-202ENST00000452852 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
LINC00393-202ENST00000452852 CASC2Q6XLA1 102 aa1.7□□□□□ -2.14
LINC00393-202ENST00000452852 CDC42SE1Q9NRR8 79 aa1.7□□□□□ -2.14
LINC00393-202ENST00000452852 HCG22E2RYF7 251 aa1.69□□□□□ -2.14
LINC00393-202ENST00000452852 A6NN06 94 aa1.68□□□□□ -2.14
LINC00393-202ENST00000452852 S4R3F8 94 aa1.68□□□□□ -2.14
LINC00393-202ENST00000452852 Q5VV11 94 aa1.67□□□□□ -2.14
LINC00393-202ENST00000452852 CSAG1Q6PB30 78 aa1.67□□□□□ -2.14
LINC00393-202ENST00000452852 A0A1W2PPM0 123 aa1.66□□□□□ -2.14
LINC00393-202ENST00000452852 F8W1H4 67 aa1.66□□□□□ -2.14
LINC00393-202ENST00000452852 SMIM6P0DI80 62 aa1.66□□□□□ -2.14
LINC00393-202ENST00000452852 UBL5Q9BZL1 73 aa1.66□□□□□ -2.14
LINC00393-202ENST00000452852 UQCRQO14949 82 aa1.65□□□□□ -2.15
LINC00393-202ENST00000452852 MIR22HGQ0VDD5 57 aa1.65□□□□□ -2.15
LINC00393-202ENST00000452852 SNURFQ9Y675 71 aa1.65□□□□□ -2.15
LINC00393-202ENST00000452852 TP53AIP1Q9HCN2 124 aa1.64□□□□□ -2.15
LINC00393-202ENST00000452852 SPCS1Q9Y6A9 102 aa1.64□□□□□ -2.15
LINC00393-202ENST00000452852 KLKP1Q107X0 134 aa1.63□□□□□ -2.15
LINC00393-202ENST00000452852 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
LINC00393-202ENST00000452852 NEBP20929 6669 aa1.62□□□□□ -2.15
LINC00393-202ENST00000452852 MT1BP07438 61 aa1.62□□□□□ -2.15
LINC00393-202ENST00000452852 COX7CP15954 63 aa1.62□□□□□ -2.15
LINC00393-202ENST00000452852 KRTAP19-8Q3LI54 63 aa1.62□□□□□ -2.15
LINC00393-202ENST00000452852 KRTAP20-1Q3LI63 56 aa1.62□□□□□ -2.15
LINC00393-202ENST00000452852 CRIPTQ9P021 101 aa1.62□□□□□ -2.15
LINC00393-202ENST00000452852 CYSTM1Q9H1C7 97 aa1.61□□□□□ -2.15
LINC00393-202ENST00000452852 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms