RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 TEN1Q86WV5 123 aa1.89□□□□□ -2.11
LINC00393-202ENST00000452852 ZCCHC13Q8WW36 166 aaKnown RBP1.89□□□□□ -2.11
LINC00393-202ENST00000452852 RAB37Q96AX2 223 aa1.89□□□□□ -2.11
LINC00393-202ENST00000452852 A0A087WSZ3 146 aa1.88□□□□□ -2.11
LINC00393-202ENST00000452852 H0YGX0 51 aa1.88□□□□□ -2.11
LINC00393-202ENST00000452852 KRTAP6-3Q3LI67 103 aa1.88□□□□□ -2.11
LINC00393-202ENST00000452852 PRR15Q8IV56 129 aa1.88□□□□□ -2.11
LINC00393-202ENST00000452852 H3BMG7 143 aa1.87□□□□□ -2.11
LINC00393-202ENST00000452852 COX8AP10176 69 aa1.87□□□□□ -2.11
LINC00393-202ENST00000452852 FABP2P12104 132 aa1.87□□□□□ -2.11
LINC00393-202ENST00000452852 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
LINC00393-202ENST00000452852 COA5Q86WW8 74 aa1.87□□□□□ -2.11
LINC00393-202ENST00000452852 A0A1B0GX51 115 aa1.86□□□□□ -2.11
LINC00393-202ENST00000452852 DLEU1O43261 78 aa1.86□□□□□ -2.11
LINC00393-202ENST00000452852 DNAL4O96015 105 aa1.86□□□□□ -2.11
LINC00393-202ENST00000452852 BAALC-AS2P0C853 105 aa1.86□□□□□ -2.11
LINC00393-202ENST00000452852 S100A1P23297 94 aa1.86□□□□□ -2.11
LINC00393-202ENST00000452852 C14orf144Q96I85 54 aa1.85□□□□□ -2.11
LINC00393-202ENST00000452852 VAMP8Q9BV40 100 aa1.85□□□□□ -2.11
LINC00393-202ENST00000452852 ORMDL1Q9P0S3 153 aa1.85□□□□□ -2.11
LINC00393-202ENST00000452852 HIGD1BQ9P298 99 aa1.85□□□□□ -2.11
LINC00393-202ENST00000452852 PRO1854Q9UHT4 67 aa1.85□□□□□ -2.11
LINC00393-202ENST00000452852 TRBV7-4A0A0J9YYF1 115 aa1.84□□□□□ -2.11
LINC00393-202ENST00000452852 TRACP01848 142 aa1.84□□□□□ -2.11
LINC00393-202ENST00000452852 COX6CP09669 75 aa1.84□□□□□ -2.11
LINC00393-202ENST00000452852 KRTAP13-4Q3LI77 160 aa1.84□□□□□ -2.11
LINC00393-202ENST00000452852 SPATA45Q537H7 98 aa1.84□□□□□ -2.11
LINC00393-202ENST00000452852 C14orf132Q9NPU4 83 aa1.84□□□□□ -2.11
LINC00393-202ENST00000452852 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
LINC00393-202ENST00000452852 CCKP06307 115 aa1.83□□□□□ -2.12
LINC00393-202ENST00000452852 KRTAP12-1P59990 96 aa1.83□□□□□ -2.12
LINC00393-202ENST00000452852 VPS25Q9BRG1 176 aa1.83□□□□□ -2.12
LINC00393-202ENST00000452852 LINC00846Q9NV44 126 aa1.83□□□□□ -2.12
LINC00393-202ENST00000452852 J3KT08 172 aa1.82□□□□□ -2.12
LINC00393-202ENST00000452852 SCGB1A1P11684 91 aa1.82□□□□□ -2.12
LINC00393-202ENST00000452852 ROMO1P60602 79 aa1.82□□□□□ -2.12
LINC00393-202ENST00000452852 DSCR8Q96T75 97 aa1.82□□□□□ -2.12
LINC00393-202ENST00000452852 NDUFB1O75438 58 aa1.81□□□□□ -2.12
LINC00393-202ENST00000452852 MT2AP02795 61 aa1.81□□□□□ -2.12
LINC00393-202ENST00000452852 LINC00472Q9H8W2 130 aa1.81□□□□□ -2.12
LINC00393-202ENST00000452852 MACF1Q9UPN3 7388 aaKnown RBP1.8□□□□□ -2.12
LINC00393-202ENST00000452852 RBM3P98179 157 aaKnown RBP1.8□□□□□ -2.12
LINC00393-202ENST00000452852 HSD52Q0P140 79 aa1.8□□□□□ -2.12
LINC00393-202ENST00000452852 TMEM254Q8TBM7 123 aa1.8□□□□□ -2.12
LINC00393-202ENST00000452852 C9JAW5 83 aa1.79□□□□□ -2.12
LINC00393-202ENST00000452852 MT1FP04733 61 aa1.79□□□□□ -2.12
LINC00393-202ENST00000452852 SPINK7P58062 85 aa1.79□□□□□ -2.12
LINC00393-202ENST00000452852 WFDC13Q8IUB5 93 aa1.78□□□□□ -2.12
LINC00393-202ENST00000452852 JMJD7-PLA2G4BH0Y9G9 81 aa1.77□□□□□ -2.13
LINC00393-202ENST00000452852 RPS28P62857 69 aaKnown RBP1.77□□□□□ -2.13
LINC00393-202ENST00000452852 BRK1Q8WUW1 75 aa1.77□□□□□ -2.13
LINC00393-202ENST00000452852 UQCR10Q9UDW1 63 aa1.77□□□□□ -2.13
LINC00393-202ENST00000452852 USH2AO75445 5202 aa1.77□□□□□ -2.13
LINC00393-202ENST00000452852 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
LINC00393-202ENST00000452852 IGKV3D-7A0A0C4DH55 119 aa1.76□□□□□ -2.13
LINC00393-202ENST00000452852 hDV103S1A0JD37 113 aa1.76□□□□□ -2.13
LINC00393-202ENST00000452852 PDE6GP18545 87 aa1.76□□□□□ -2.13
LINC00393-202ENST00000452852 KRTAP12-3P60328 96 aa1.76□□□□□ -2.13
LINC00393-202ENST00000452852 ATXN8Q156A1 80 aa1.76□□□□□ -2.13
LINC00393-202ENST00000452852 LOC110117498A0A087WWA1 95 aa1.75□□□□□ -2.13
LINC00393-202ENST00000452852 PYY3Q5JQD4 70 aa1.75□□□□□ -2.13
LINC00393-202ENST00000452852 M0R143 59 aa1.74□□□□□ -2.13
LINC00393-202ENST00000452852 NREPQ16612 68 aa1.74□□□□□ -2.13
LINC00393-202ENST00000452852 KRTAP19-6Q3LI70 58 aa1.74□□□□□ -2.13
LINC00393-202ENST00000452852 H1FX-AS1Q4G0G2 97 aa1.74□□□□□ -2.13
LINC00393-202ENST00000452852 MRPL34Q9BQ48 92 aaKnown RBP1.74□□□□□ -2.13
LINC00393-202ENST00000452852 SYNE2Q8WXH0 6885 aaKnown RBP1.74□□□□□ -2.13
LINC00393-202ENST00000452852 FCGBPQ9Y6R7 5405 aaPredicted RBP1.73□□□□□ -2.13
LINC00393-202ENST00000452852 MMP24-AS1A0A0U1RRL7 71 aa1.72□□□□□ -2.13
LINC00393-202ENST00000452852 NAA38Q9BRA0 125 aaKnown RBP1.72□□□□□ -2.13
LINC00393-202ENST00000452852 FAM236AA0A1B0GUQ0 79 aa1.71□□□□□ -2.14
LINC00393-202ENST00000452852 FAM236BA0A1B0GV22 79 aa1.71□□□□□ -2.14
LINC00393-202ENST00000452852 K7EQZ3 153 aa1.71□□□□□ -2.14
LINC00393-202ENST00000452852 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
LINC00393-202ENST00000452852 CASC2Q6XLA1 102 aa1.7□□□□□ -2.14
LINC00393-202ENST00000452852 CDC42SE1Q9NRR8 79 aa1.7□□□□□ -2.14
LINC00393-202ENST00000452852 HCG22E2RYF7 251 aa1.69□□□□□ -2.14
LINC00393-202ENST00000452852 A6NN06 94 aa1.68□□□□□ -2.14
LINC00393-202ENST00000452852 S4R3F8 94 aa1.68□□□□□ -2.14
LINC00393-202ENST00000452852 Q5VV11 94 aa1.67□□□□□ -2.14
LINC00393-202ENST00000452852 CSAG1Q6PB30 78 aa1.67□□□□□ -2.14
LINC00393-202ENST00000452852 A0A1W2PPM0 123 aa1.66□□□□□ -2.14
LINC00393-202ENST00000452852 F8W1H4 67 aa1.66□□□□□ -2.14
LINC00393-202ENST00000452852 SMIM6P0DI80 62 aa1.66□□□□□ -2.14
LINC00393-202ENST00000452852 UBL5Q9BZL1 73 aa1.66□□□□□ -2.14
LINC00393-202ENST00000452852 UQCRQO14949 82 aa1.65□□□□□ -2.15
LINC00393-202ENST00000452852 MIR22HGQ0VDD5 57 aa1.65□□□□□ -2.15
LINC00393-202ENST00000452852 SNURFQ9Y675 71 aa1.65□□□□□ -2.15
LINC00393-202ENST00000452852 TP53AIP1Q9HCN2 124 aa1.64□□□□□ -2.15
LINC00393-202ENST00000452852 SPCS1Q9Y6A9 102 aa1.64□□□□□ -2.15
LINC00393-202ENST00000452852 KLKP1Q107X0 134 aa1.63□□□□□ -2.15
LINC00393-202ENST00000452852 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
LINC00393-202ENST00000452852 NEBP20929 6669 aa1.62□□□□□ -2.15
LINC00393-202ENST00000452852 MT1BP07438 61 aa1.62□□□□□ -2.15
LINC00393-202ENST00000452852 COX7CP15954 63 aa1.62□□□□□ -2.15
LINC00393-202ENST00000452852 KRTAP19-8Q3LI54 63 aa1.62□□□□□ -2.15
LINC00393-202ENST00000452852 KRTAP20-1Q3LI63 56 aa1.62□□□□□ -2.15
LINC00393-202ENST00000452852 CRIPTQ9P021 101 aa1.62□□□□□ -2.15
LINC00393-202ENST00000452852 CYSTM1Q9H1C7 97 aa1.61□□□□□ -2.15
LINC00393-202ENST00000452852 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms