RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 C1orf64Q8NEQ6 169 aa8.36□□□□□ -1.07
CTNS-204ENST00000452111 KRTAP9-7A8MTY7 169 aa8.35□□□□□ -1.07
CTNS-204ENST00000452111 S4R3F8 94 aa8.33□□□□□ -1.08
CTNS-204ENST00000452111 MACF1Q9UPN3 7388 aaKnown RBP8.32□□□□□ -1.08
CTNS-204ENST00000452111 TRAV7A0A075B6U4 112 aa8.31□□□□□ -1.08
CTNS-204ENST00000452111 KRTAP19-6Q3LI70 58 aa8.31□□□□□ -1.08
CTNS-204ENST00000452111 LCA10Q71F78 164 aa8.27□□□□□ -1.09
CTNS-204ENST00000452111 CYP4F30PQ9H0H9 118 aa8.26□□□□□ -1.09
CTNS-204ENST00000452111 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
CTNS-204ENST00000452111 CSAG1Q6PB30 78 aa8.25□□□□□ -1.09
CTNS-204ENST00000452111 SYNE2Q8WXH0 6885 aaKnown RBP8.24□□□□□ -1.09
CTNS-204ENST00000452111 LOC101927531A0A1B0GV80 90 aa8.2□□□□□ -1.1
CTNS-204ENST00000452111 OCR1Q9BZK8 76 aa8.18□□□□□ -1.1
CTNS-204ENST00000452111 C20orf197Q8N268 126 aa8.16□□□□□ -1.1
CTNS-204ENST00000452111 H0Y9P7 68 aa8.14□□□□□ -1.11
CTNS-204ENST00000452111 KLKP1Q107X0 134 aa8.14□□□□□ -1.11
CTNS-204ENST00000452111 TMEM258P61165 79 aa8.13□□□□□ -1.11
CTNS-204ENST00000452111 NDUFC1O43677 76 aa8.11□□□□□ -1.11
CTNS-204ENST00000452111 CYSTM1Q9H1C7 97 aa8.08□□□□□ -1.12
CTNS-204ENST00000452111 SPRR2GQ9BYE4 73 aa8.06□□□□□ -1.12
CTNS-204ENST00000452111 SNURFQ9Y675 71 aa8.05□□□□□ -1.12
CTNS-204ENST00000452111 MT1BP07438 61 aa8.04□□□□□ -1.12
CTNS-204ENST00000452111 Q5VV11 94 aa8.04□□□□□ -1.12
CTNS-204ENST00000452111 H7BZZ5 65 aa8.03□□□□□ -1.12
CTNS-204ENST00000452111 KRTAP19-8Q3LI54 63 aa8.01□□□□□ -1.13
CTNS-204ENST00000452111 LINC00208Q96KT6 92 aa8.01□□□□□ -1.13
CTNS-204ENST00000452111 H3BPC8 53 aa7.99□□□□□ -1.13
CTNS-204ENST00000452111 MP68P56378 58 aa7.99□□□□□ -1.13
CTNS-204ENST00000452111 ATP5EP56381 51 aaPredicted RBP7.99□□□□□ -1.13
CTNS-204ENST00000452111 RPS28P62857 69 aaKnown RBP7.98□□□□□ -1.13
CTNS-204ENST00000452111 A6NN06 94 aa7.96□□□□□ -1.14
CTNS-204ENST00000452111 A8MUN3 132 aa7.95□□□□□ -1.14
CTNS-204ENST00000452111 CRIPTQ9P021 101 aa7.92□□□□□ -1.14
CTNS-204ENST00000452111 LOC100996750A0A140TA64 210 aa7.89□□□□□ -1.15
CTNS-204ENST00000452111 KRTAP6-3Q3LI67 103 aa7.89□□□□□ -1.15
CTNS-204ENST00000452111 KRTAP4-6Q9BYQ5 205 aa7.89□□□□□ -1.15
CTNS-204ENST00000452111 SERP1Q9Y6X1 66 aa7.89□□□□□ -1.15
CTNS-204ENST00000452111 H0YAA0 97 aa7.88□□□□□ -1.15
CTNS-204ENST00000452111 KRTAP10-5P60370 271 aa7.85□□□□□ -1.15
CTNS-204ENST00000452111 ADM2Q7Z4H4 148 aa7.85□□□□□ -1.15
CTNS-204ENST00000452111 SPANXA2-OT1Q8N9U9 137 aa7.8□□□□□ -1.16
CTNS-204ENST00000452111 DMAC1Q96GE9 116 aa7.74□□□□□ -1.17
CTNS-204ENST00000452111 NEBP20929 6669 aa7.73□□□□□ -1.17
CTNS-204ENST00000452111 SMIM26A0A096LP01 95 aa7.72□□□□□ -1.17
CTNS-204ENST00000452111 MUC12Q9UKN1 5478 aa7.68□□□□□ -1.18
CTNS-204ENST00000452111 P0C880 135 aa7.66□□□□□ -1.18
CTNS-204ENST00000452111 R4GN34 69 aa7.64□□□□□ -1.19
CTNS-204ENST00000452111 M0QZ58 72 aa7.59□□□□□ -1.19
CTNS-204ENST00000452111 PLAC4Q8WY50 150 aa7.58□□□□□ -1.2
CTNS-204ENST00000452111 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
CTNS-204ENST00000452111 ACYP2P14621 99 aa7.54□□□□□ -1.2
CTNS-204ENST00000452111 MT1XP80297 61 aa7.54□□□□□ -1.2
CTNS-204ENST00000452111 COA5Q86WW8 74 aa7.53□□□□□ -1.2
CTNS-204ENST00000452111 KRTAP5-9P26371 169 aa7.52□□□□□ -1.21
CTNS-204ENST00000452111 KMT2DO14686 5537 aa7.52□□□□□ -1.21
CTNS-204ENST00000452111 V9GYY9 64 aa7.51□□□□□ -1.21
CTNS-204ENST00000452111 Q1T7F1 81 aa7.5□□□□□ -1.21
CTNS-204ENST00000452111 LINC01554Q52M75 96 aa7.5□□□□□ -1.21
CTNS-204ENST00000452111 MDN1Q9NU22 5596 aa7.47□□□□□ -1.21
CTNS-204ENST00000452111 SPTSSBQ8NFR3 76 aa7.45□□□□□ -1.22
CTNS-204ENST00000452111 CHKB-CPT1BH3BT56 60 aa7.44□□□□□ -1.22
CTNS-204ENST00000452111 SPRR2FQ96RM1 72 aa7.35□□□□□ -1.23
CTNS-204ENST00000452111 KRTAP12-2P59991 146 aa7.33□□□□□ -1.24
CTNS-204ENST00000452111 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
CTNS-204ENST00000452111 KRTAP20-1Q3LI63 56 aa7.32□□□□□ -1.24
CTNS-204ENST00000452111 KRTAP8-1Q8IUC2 63 aa7.32□□□□□ -1.24
CTNS-204ENST00000452111 KRTAP4-8Q9BYQ9 185 aa7.3□□□□□ -1.24
CTNS-204ENST00000452111 PSPHP1O15172 72 aa7.29□□□□□ -1.24
CTNS-204ENST00000452111 PRR15LQ9BU68 103 aa7.28□□□□□ -1.24
CTNS-204ENST00000452111 SPRR2EP22531 72 aa7.24□□□□□ -1.25
CTNS-204ENST00000452111 SPRR2BP35325 72 aa7.24□□□□□ -1.25
CTNS-204ENST00000452111 SPRR2AP35326 72 aa7.24□□□□□ -1.25
CTNS-204ENST00000452111 KRTAP4-8A0A0G2JLE6 195 aa7.23□□□□□ -1.25
CTNS-204ENST00000452111 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
CTNS-204ENST00000452111 BRK1Q8WUW1 75 aa7.19□□□□□ -1.26
CTNS-204ENST00000452111 PRO0628Q9UI54 55 aa7.19□□□□□ -1.26
CTNS-204ENST00000452111 KRTAP13-4Q3LI77 160 aa7.16□□□□□ -1.26
CTNS-204ENST00000452111 KRTAP10-12P60413 245 aa7.14□□□□□ -1.27
CTNS-204ENST00000452111 A0A1B0GU69 56 aa7.13□□□□□ -1.27
CTNS-204ENST00000452111 SVIPQ8NHG7 77 aa7.13□□□□□ -1.27
CTNS-204ENST00000452111 LCE1AQ5T7P2 110 aa7.12□□□□□ -1.27
CTNS-204ENST00000452111 A6NED7 52 aa7.11□□□□□ -1.27
CTNS-204ENST00000452111 KRTAP2-3P0C7H8 128 aa7.11□□□□□ -1.27
CTNS-204ENST00000452111 KRTAP2-4Q9BYR9 128 aa7.11□□□□□ -1.27
CTNS-204ENST00000452111 SEC61GP60059 68 aa7.06□□□□□ -1.28
CTNS-204ENST00000452111 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
CTNS-204ENST00000452111 CDC42SE1Q9NRR8 79 aa7.04□□□□□ -1.28
CTNS-204ENST00000452111 KRTAP4-12Q9BQ66 201 aa7.03□□□□□ -1.28
CTNS-204ENST00000452111 LCE3BQ5TA77 95 aa7□□□□□ -1.29
CTNS-204ENST00000452111 SPRR2DP22532 72 aa6.99□□□□□ -1.29
CTNS-204ENST00000452111 A0A0D9SG42 100 aa6.97□□□□□ -1.29
CTNS-204ENST00000452111 UQCR11O14957 56 aa6.97□□□□□ -1.29
CTNS-204ENST00000452111 SPATA8Q6RVD6 105 aa6.94□□□□□ -1.3
CTNS-204ENST00000452111 A0A1B0GU33 70 aa6.9□□□□□ -1.3
CTNS-204ENST00000452111 A8MU10 97 aa6.9□□□□□ -1.3
CTNS-204ENST00000452111 MIR22HGQ0VDD5 57 aa6.9□□□□□ -1.3
CTNS-204ENST00000452111 KRTAP2-2Q9BYT5 123 aa6.89□□□□□ -1.31
CTNS-204ENST00000452111 KRTAP2-1Q9BYU5 128 aa6.89□□□□□ -1.31
CTNS-204ENST00000452111 SPINT4Q6UDR6 99 aa6.86□□□□□ -1.31
CTNS-204ENST00000452111 PMAIP1Q13794 54 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms