RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 A8MU10 97 aa5.22□□□□□ -1.57
LINC01238-204ENST00000451070 PRR15LQ9BU68 103 aa5.21□□□□□ -1.58
LINC01238-204ENST00000451070 M0R2T5 61 aa5.2□□□□□ -1.58
LINC01238-204ENST00000451070 LINC00575Q6W349 94 aa5.2□□□□□ -1.58
LINC01238-204ENST00000451070 COX6B2Q6YFQ2 88 aa5.2□□□□□ -1.58
LINC01238-204ENST00000451070 KRTAP4-8Q9BYQ9 185 aa5.19□□□□□ -1.58
LINC01238-204ENST00000451070 IGKV4-1P06312 121 aa5.18□□□□□ -1.58
LINC01238-204ENST00000451070 IGFL1Q6UW32 110 aa5.18□□□□□ -1.58
LINC01238-204ENST00000451070 Q6ZQY7 126 aa5.18□□□□□ -1.58
LINC01238-204ENST00000451070 H3BPC8 53 aa5.17□□□□□ -1.58
LINC01238-204ENST00000451070 LINC00208Q96KT6 92 aa5.17□□□□□ -1.58
LINC01238-204ENST00000451070 LINC01558Q9Y6Z2 57 aa5.17□□□□□ -1.58
LINC01238-204ENST00000451070 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.12□□□□□ -1.59
LINC01238-204ENST00000451070 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
LINC01238-204ENST00000451070 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
LINC01238-204ENST00000451070 Q96NJ1 140 aa5.08□□□□□ -1.6
LINC01238-204ENST00000451070 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
LINC01238-204ENST00000451070 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
LINC01238-204ENST00000451070 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
LINC01238-204ENST00000451070 A8MUU9 505 aa5.06□□□□□ -1.6
LINC01238-204ENST00000451070 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.06□□□□□ -1.6
LINC01238-204ENST00000451070 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
LINC01238-204ENST00000451070 A0A087WSZ3 146 aa5.03□□□□□ -1.6
LINC01238-204ENST00000451070 A0A1W2PNM2 257 aa5.02□□□□□ -1.61
LINC01238-204ENST00000451070 DSCR10P59022 87 aa5.01□□□□□ -1.61
LINC01238-204ENST00000451070 COA5Q86WW8 74 aa5.01□□□□□ -1.61
LINC01238-204ENST00000451070 KRTAP16-1A8MUX0 517 aa5□□□□□ -1.61
LINC01238-204ENST00000451070 ROMO1P60602 79 aa5□□□□□ -1.61
LINC01238-204ENST00000451070 SSPOA2VEC9 5147 aa4.99□□□□□ -1.61
LINC01238-204ENST00000451070 USH2AO75445 5202 aa4.99□□□□□ -1.61
LINC01238-204ENST00000451070 H0Y9P7 68 aa4.98□□□□□ -1.61
LINC01238-204ENST00000451070 SPINK7P58062 85 aa4.98□□□□□ -1.61
LINC01238-204ENST00000451070 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
LINC01238-204ENST00000451070 MT2AP02795 61 aa4.96□□□□□ -1.62
LINC01238-204ENST00000451070 ADM2Q7Z4H4 148 aa4.96□□□□□ -1.62
LINC01238-204ENST00000451070 SPATA8Q6RVD6 105 aa4.95□□□□□ -1.62
LINC01238-204ENST00000451070 Q8N9L7 120 aa4.95□□□□□ -1.62
LINC01238-204ENST00000451070 HRES1P13985 223 aa4.94□□□□□ -1.62
LINC01238-204ENST00000451070 CSAG1Q6PB30 78 aa4.94□□□□□ -1.62
LINC01238-204ENST00000451070 MT1FP04733 61 aa4.93□□□□□ -1.62
LINC01238-204ENST00000451070 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
LINC01238-204ENST00000451070 LINC00472Q9H8W2 130 aa4.92□□□□□ -1.62
LINC01238-204ENST00000451070 DEFB116Q30KQ4 102 aa4.91□□□□□ -1.62
LINC01238-204ENST00000451070 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
LINC01238-204ENST00000451070 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
LINC01238-204ENST00000451070 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
LINC01238-204ENST00000451070 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
LINC01238-204ENST00000451070 KRTAP10-10P60014 251 aa4.87□□□□□ -1.63
LINC01238-204ENST00000451070 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
LINC01238-204ENST00000451070 A0A1B0GVX0 72 aa4.83□□□□□ -1.64
LINC01238-204ENST00000451070 UQCR11O14957 56 aa4.83□□□□□ -1.64
LINC01238-204ENST00000451070 KRTAP9-9Q9BYP9 154 aa4.81□□□□□ -1.64
LINC01238-204ENST00000451070 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
LINC01238-204ENST00000451070 K7EQZ3 153 aa4.8□□□□□ -1.64
LINC01238-204ENST00000451070 KRTAP4-8A0A0G2JLE6 195 aa4.79□□□□□ -1.64
LINC01238-204ENST00000451070 P0C880 135 aa4.78□□□□□ -1.64
LINC01238-204ENST00000451070 TP53AIP1Q9HCN2 124 aa4.77□□□□□ -1.65
LINC01238-204ENST00000451070 KRTAP19-6Q3LI70 58 aa4.76□□□□□ -1.65
LINC01238-204ENST00000451070 DMAC1Q96GE9 116 aa4.76□□□□□ -1.65
LINC01238-204ENST00000451070 A8MWP4 228 aa4.74□□□□□ -1.65
LINC01238-204ENST00000451070 K7ERS5 55 aa4.74□□□□□ -1.65
LINC01238-204ENST00000451070 WFDC13Q8IUB5 93 aa4.74□□□□□ -1.65
LINC01238-204ENST00000451070 C8orf17Q9NRJ1 99 aa4.73□□□□□ -1.65
LINC01238-204ENST00000451070 A0A1B0GU69 56 aa4.72□□□□□ -1.65
LINC01238-204ENST00000451070 MACF1Q9UPN3 7388 aaKnown RBP4.71□□□□□ -1.65
LINC01238-204ENST00000451070 ACYP2P14621 99 aa4.7□□□□□ -1.66
LINC01238-204ENST00000451070 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
LINC01238-204ENST00000451070 LCE4AQ5TA78 99 aa4.67□□□□□ -1.66
LINC01238-204ENST00000451070 SYNE2Q8WXH0 6885 aaKnown RBP4.65□□□□□ -1.66
LINC01238-204ENST00000451070 MMP24-AS1A0A0U1RRL7 71 aa4.65□□□□□ -1.67
LINC01238-204ENST00000451070 H1FX-AS1Q4G0G2 97 aa4.64□□□□□ -1.67
LINC01238-204ENST00000451070 Q5W150 140 aa4.64□□□□□ -1.67
LINC01238-204ENST00000451070 MRPL34Q9BQ48 92 aaKnown RBP4.64□□□□□ -1.67
LINC01238-204ENST00000451070 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
LINC01238-204ENST00000451070 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
LINC01238-204ENST00000451070 KRTAP6-3Q3LI67 103 aa4.61□□□□□ -1.67
LINC01238-204ENST00000451070 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
LINC01238-204ENST00000451070 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
LINC01238-204ENST00000451070 IGKV2D-30A0A075B6S6 120 aa4.58□□□□□ -1.68
LINC01238-204ENST00000451070 IGKV2-30P06310 120 aa4.58□□□□□ -1.68
LINC01238-204ENST00000451070 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
LINC01238-204ENST00000451070 MT1BP07438 61 aa4.5□□□□□ -1.69
LINC01238-204ENST00000451070 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
LINC01238-204ENST00000451070 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
LINC01238-204ENST00000451070 NEBP20929 6669 aa4.49□□□□□ -1.69
LINC01238-204ENST00000451070 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
LINC01238-204ENST00000451070 SPRR2GQ9BYE4 73 aa4.45□□□□□ -1.7
LINC01238-204ENST00000451070 S4R3F8 94 aa4.43□□□□□ -1.7
LINC01238-204ENST00000451070 KRTAP10-5P60370 271 aa4.41□□□□□ -1.7
LINC01238-204ENST00000451070 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
LINC01238-204ENST00000451070 MUC12Q9UKN1 5478 aa4.4□□□□□ -1.71
LINC01238-204ENST00000451070 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
LINC01238-204ENST00000451070 H0YAA0 97 aa4.35□□□□□ -1.71
LINC01238-204ENST00000451070 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
LINC01238-204ENST00000451070 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
LINC01238-204ENST00000451070 A0A1B0GU33 70 aa4.29□□□□□ -1.72
LINC01238-204ENST00000451070 KMT2DO14686 5537 aa4.29□□□□□ -1.72
LINC01238-204ENST00000451070 CRIPTQ9P021 101 aa4.28□□□□□ -1.72
LINC01238-204ENST00000451070 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
LINC01238-204ENST00000451070 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms