RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 KRTAP3-3Q9BYR6 98 aa5.53□□□□□ -1.52
CCDC171-203ENST00000449575 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
CCDC171-203ENST00000449575 A0A1B0GVX0 72 aa5.52□□□□□ -1.53
CCDC171-203ENST00000449575 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
CCDC171-203ENST00000449575 SPATA8Q6RVD6 105 aa5.52□□□□□ -1.53
CCDC171-203ENST00000449575 Q96NJ1 140 aa5.52□□□□□ -1.53
CCDC171-203ENST00000449575 ADM2Q7Z4H4 148 aa5.51□□□□□ -1.53
CCDC171-203ENST00000449575 A0A1B0GU69 56 aa5.5□□□□□ -1.53
CCDC171-203ENST00000449575 UQCR11O14957 56 aa5.47□□□□□ -1.53
CCDC171-203ENST00000449575 MIR22HGQ0VDD5 57 aa5.46□□□□□ -1.53
CCDC171-203ENST00000449575 DMAC1Q96GE9 116 aa5.45□□□□□ -1.54
CCDC171-203ENST00000449575 NOTCH2NLQ7Z3S9 236 aa5.44□□□□□ -1.54
CCDC171-203ENST00000449575 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
CCDC171-203ENST00000449575 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
CCDC171-203ENST00000449575 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
CCDC171-203ENST00000449575 C9orf92A6NGG3 77 aa5.41□□□□□ -1.54
CCDC171-203ENST00000449575 KRTAP16-1A8MUX0 517 aa5.4□□□□□ -1.54
CCDC171-203ENST00000449575 CSAG1Q6PB30 78 aa5.4□□□□□ -1.54
CCDC171-203ENST00000449575 Q5W150 140 aa5.39□□□□□ -1.55
CCDC171-203ENST00000449575 MUC2Q02817 5179 aa5.39□□□□□ -1.55
CCDC171-203ENST00000449575 XP32Q5T750 250 aa5.36□□□□□ -1.55
CCDC171-203ENST00000449575 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
CCDC171-203ENST00000449575 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
CCDC171-203ENST00000449575 ROMO1P60602 79 aa5.29□□□□□ -1.56
CCDC171-203ENST00000449575 KRTAP4-1Q9BYQ7 146 aa5.27□□□□□ -1.57
CCDC171-203ENST00000449575 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
CCDC171-203ENST00000449575 RPL37P61927 97 aaKnown RBP5.24□□□□□ -1.57
CCDC171-203ENST00000449575 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
CCDC171-203ENST00000449575 IGKV2D-30A0A075B6S6 120 aa5.22□□□□□ -1.57
CCDC171-203ENST00000449575 A8MUU9 505 aa5.21□□□□□ -1.58
CCDC171-203ENST00000449575 C20orf166-AS1Q96NR2 134 aa5.21□□□□□ -1.58
CCDC171-203ENST00000449575 P0C880 135 aa5.19□□□□□ -1.58
CCDC171-203ENST00000449575 FAT4Q6V0I7 4981 aa5.17□□□□□ -1.58
CCDC171-203ENST00000449575 K7ERS5 55 aa5.12□□□□□ -1.59
CCDC171-203ENST00000449575 H0YAA0 97 aa5.12□□□□□ -1.59
CCDC171-203ENST00000449575 A0A1B0GU33 70 aa5.1□□□□□ -1.59
CCDC171-203ENST00000449575 KRTAP19-2Q3LHN2 52 aa5.1□□□□□ -1.59
CCDC171-203ENST00000449575 H1FX-AS1Q4G0G2 97 aa5.07□□□□□ -1.6
CCDC171-203ENST00000449575 LCE2CQ5TA81 110 aa5.06□□□□□ -1.6
CCDC171-203ENST00000449575 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
CCDC171-203ENST00000449575 LCE2AQ5TA79 106 aaPredicted RBP5.01□□□□□ -1.61
CCDC171-203ENST00000449575 FLGP20930 4061 aaPredicted RBP5□□□□□ -1.61
CCDC171-203ENST00000449575 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.61
CCDC171-203ENST00000449575 COX6B2Q6YFQ2 88 aa4.96□□□□□ -1.61
CCDC171-203ENST00000449575 MT1HP80294 61 aa4.96□□□□□ -1.62
CCDC171-203ENST00000449575 CRIPTQ9P021 101 aa4.95□□□□□ -1.62
CCDC171-203ENST00000449575 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
CCDC171-203ENST00000449575 KRTAP4-6Q9BYQ5 205 aa4.88□□□□□ -1.63
CCDC171-203ENST00000449575 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
CCDC171-203ENST00000449575 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
CCDC171-203ENST00000449575 M0R2T5 61 aa4.85□□□□□ -1.63
CCDC171-203ENST00000449575 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
CCDC171-203ENST00000449575 LCE2BO14633 110 aa4.84□□□□□ -1.63
CCDC171-203ENST00000449575 KRTAP10-6P60371 365 aaPredicted RBP4.82□□□□□ -1.64
CCDC171-203ENST00000449575 CAMK2N1Q7Z7J9 78 aa4.82□□□□□ -1.64
CCDC171-203ENST00000449575 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
CCDC171-203ENST00000449575 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
CCDC171-203ENST00000449575 A0A0D9SG42 100 aa4.74□□□□□ -1.65
CCDC171-203ENST00000449575 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
CCDC171-203ENST00000449575 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
CCDC171-203ENST00000449575 S4R3F8 94 aa4.7□□□□□ -1.66
CCDC171-203ENST00000449575 MT2AP02795 61 aa4.69□□□□□ -1.66
CCDC171-203ENST00000449575 MT1FP04733 61 aa4.67□□□□□ -1.66
CCDC171-203ENST00000449575 KRTAP9-2Q9BYQ4 174 aa4.67□□□□□ -1.66
CCDC171-203ENST00000449575 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.66
CCDC171-203ENST00000449575 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
CCDC171-203ENST00000449575 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
CCDC171-203ENST00000449575 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
CCDC171-203ENST00000449575 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
CCDC171-203ENST00000449575 M0QZ58 72 aa4.55□□□□□ -1.68
CCDC171-203ENST00000449575 USH2AO75445 5202 aa4.53□□□□□ -1.68
CCDC171-203ENST00000449575 PLAC4Q8WY50 150 aa4.5□□□□□ -1.69
CCDC171-203ENST00000449575 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.7
CCDC171-203ENST00000449575 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
CCDC171-203ENST00000449575 CRCT1Q9UGL9 99 aa4.43□□□□□ -1.7
CCDC171-203ENST00000449575 KRTAP9-6A0A140TA67 174 aa4.41□□□□□ -1.7
CCDC171-203ENST00000449575 R4GN34 69 aa4.41□□□□□ -1.7
CCDC171-203ENST00000449575 SPRR2GQ9BYE4 73 aa4.39□□□□□ -1.71
CCDC171-203ENST00000449575 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
CCDC171-203ENST00000449575 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
CCDC171-203ENST00000449575 MT1BP07438 61 aa4.34□□□□□ -1.71
CCDC171-203ENST00000449575 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
CCDC171-203ENST00000449575 FCGBPQ9Y6R7 5405 aaPredicted RBP4.3□□□□□ -1.72
CCDC171-203ENST00000449575 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
CCDC171-203ENST00000449575 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
CCDC171-203ENST00000449575 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
CCDC171-203ENST00000449575 KRTAP10-5P60370 271 aa4.15□□□□□ -1.74
CCDC171-203ENST00000449575 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
CCDC171-203ENST00000449575 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
CCDC171-203ENST00000449575 MT1XP80297 61 aa4.12□□□□□ -1.75
CCDC171-203ENST00000449575 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
CCDC171-203ENST00000449575 TNP1P09430 55 aa4.06□□□□□ -1.76
CCDC171-203ENST00000449575 KMT2DO14686 5537 aa4.04□□□□□ -1.76
CCDC171-203ENST00000449575 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
CCDC171-203ENST00000449575 INE1O15225 51 aa4.01□□□□□ -1.77
CCDC171-203ENST00000449575 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
CCDC171-203ENST00000449575 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
CCDC171-203ENST00000449575 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.77
CCDC171-203ENST00000449575 KRTAP4-7Q9BYR0 210 aa3.94□□□□□ -1.78
CCDC171-203ENST00000449575 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms