RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
CHCHD3-203ENST00000448878 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
CHCHD3-203ENST00000448878 KLKP1Q107X0 134 aa7.92□□□□□ -1.14
CHCHD3-203ENST00000448878 LCA10Q71F78 164 aa7.91□□□□□ -1.14
CHCHD3-203ENST00000448878 BPY2O14599 106 aa7.9□□□□□ -1.14
CHCHD3-203ENST00000448878 CASC2Q6XLA1 102 aa7.89□□□□□ -1.15
CHCHD3-203ENST00000448878 KRTAP3-1Q9BYR8 98 aa7.88□□□□□ -1.15
CHCHD3-203ENST00000448878 SPRR2EP22531 72 aa7.87□□□□□ -1.15
CHCHD3-203ENST00000448878 SPRR2BP35325 72 aa7.87□□□□□ -1.15
CHCHD3-203ENST00000448878 SPRR2AP35326 72 aa7.87□□□□□ -1.15
CHCHD3-203ENST00000448878 LINC00643Q86TS7 51 aa7.87□□□□□ -1.15
CHCHD3-203ENST00000448878 C1orf64Q8NEQ6 169 aa7.87□□□□□ -1.15
CHCHD3-203ENST00000448878 SPRR2FQ96RM1 72 aa7.86□□□□□ -1.15
CHCHD3-203ENST00000448878 ATP5EP2Q5VTU8 51 aa7.85□□□□□ -1.15
CHCHD3-203ENST00000448878 CXCL6P80162 114 aa7.84□□□□□ -1.15
CHCHD3-203ENST00000448878 Q8N9L7 120 aa7.84□□□□□ -1.15
CHCHD3-203ENST00000448878 MT-ATP8P03928 68 aa7.74□□□□□ -1.17
CHCHD3-203ENST00000448878 KRTAP2-2Q9BYT5 123 aa7.74□□□□□ -1.17
CHCHD3-203ENST00000448878 KRTAP2-1Q9BYU5 128 aa7.74□□□□□ -1.17
CHCHD3-203ENST00000448878 CRIPTQ9P021 101 aa7.74□□□□□ -1.17
CHCHD3-203ENST00000448878 HIST1H4AP62805 103 aaKnown RBP7.71□□□□□ -1.18
CHCHD3-203ENST00000448878 KRTAP8-1Q8IUC2 63 aa7.67□□□□□ -1.18
CHCHD3-203ENST00000448878 PRO2289Q9P1D8 64 aa7.65□□□□□ -1.18
CHCHD3-203ENST00000448878 LCE1AQ5T7P2 110 aa7.62□□□□□ -1.19
CHCHD3-203ENST00000448878 SPRR2DP22532 72 aa7.61□□□□□ -1.19
CHCHD3-203ENST00000448878 A0A087WVE0 104 aa7.6□□□□□ -1.19
CHCHD3-203ENST00000448878 SCGB1A1P11684 91 aa7.57□□□□□ -1.2
CHCHD3-203ENST00000448878 MT1XP80297 61 aa7.54□□□□□ -1.2
CHCHD3-203ENST00000448878 TP53AIP1Q9HCN2 124 aa7.54□□□□□ -1.2
CHCHD3-203ENST00000448878 A8MUN3 132 aa7.53□□□□□ -1.2
CHCHD3-203ENST00000448878 PLAC4Q8WY50 150 aa7.53□□□□□ -1.2
CHCHD3-203ENST00000448878 ATOX1O00244 68 aa7.51□□□□□ -1.21
CHCHD3-203ENST00000448878 CYP4F30PQ9H0H9 118 aa7.49□□□□□ -1.21
CHCHD3-203ENST00000448878 NDUFC1O43677 76 aa7.48□□□□□ -1.21
CHCHD3-203ENST00000448878 SMIM20Q8N5G0 67 aa7.48□□□□□ -1.21
CHCHD3-203ENST00000448878 ADM2Q7Z4H4 148 aa7.47□□□□□ -1.21
CHCHD3-203ENST00000448878 H0YAA0 97 aa7.45□□□□□ -1.22
CHCHD3-203ENST00000448878 KRTAP4-8A0A0G2JLE6 195 aa7.43□□□□□ -1.22
CHCHD3-203ENST00000448878 KRTAP4-8Q9BYQ9 185 aa7.43□□□□□ -1.22
CHCHD3-203ENST00000448878 KRTAP12-2P59991 146 aa7.42□□□□□ -1.22
CHCHD3-203ENST00000448878 LCE3BQ5TA77 95 aa7.42□□□□□ -1.22
CHCHD3-203ENST00000448878 ANAPC13Q9BS18 74 aa7.41□□□□□ -1.22
CHCHD3-203ENST00000448878 TRAV7A0A075B6U4 112 aa7.4□□□□□ -1.22
CHCHD3-203ENST00000448878 UQCRQO14949 82 aa7.4□□□□□ -1.22
CHCHD3-203ENST00000448878 SERP2Q8N6R1 65 aa7.38□□□□□ -1.23
CHCHD3-203ENST00000448878 OCR1Q9BZK8 76 aa7.38□□□□□ -1.23
CHCHD3-203ENST00000448878 LOC101927531A0A1B0GV80 90 aa7.35□□□□□ -1.23
CHCHD3-203ENST00000448878 TRAV22A0A0B4J277 110 aa7.34□□□□□ -1.23
CHCHD3-203ENST00000448878 MP68P56378 58 aa7.33□□□□□ -1.24
CHCHD3-203ENST00000448878 R4GN34 69 aa7.33□□□□□ -1.24
CHCHD3-203ENST00000448878 COX7CP15954 63 aa7.32□□□□□ -1.24
CHCHD3-203ENST00000448878 H0Y9P7 68 aa7.3□□□□□ -1.24
CHCHD3-203ENST00000448878 H3BPC8 53 aa7.28□□□□□ -1.24
CHCHD3-203ENST00000448878 M0QZ58 72 aa7.25□□□□□ -1.25
CHCHD3-203ENST00000448878 PCP4P48539 62 aa7.24□□□□□ -1.25
CHCHD3-203ENST00000448878 C20orf197Q8N268 126 aa7.24□□□□□ -1.25
CHCHD3-203ENST00000448878 KRTAP10-7P60409 375 aaPredicted RBP7.23□□□□□ -1.25
CHCHD3-203ENST00000448878 LINC01554Q52M75 96 aa7.23□□□□□ -1.25
CHCHD3-203ENST00000448878 LINC00208Q96KT6 92 aa7.23□□□□□ -1.25
CHCHD3-203ENST00000448878 CCDC179H3BU77 68 aa7.19□□□□□ -1.26
CHCHD3-203ENST00000448878 P0C880 135 aa7.19□□□□□ -1.26
CHCHD3-203ENST00000448878 SNURFQ9Y675 71 aa7.18□□□□□ -1.26
CHCHD3-203ENST00000448878 GPR98Q8WXG9 6306 aa7.15□□□□□ -1.26
CHCHD3-203ENST00000448878 KRTAP10-12P60413 245 aa7.14□□□□□ -1.27
CHCHD3-203ENST00000448878 DSTQ03001 7570 aaKnown RBP7.1□□□□□ -1.27
CHCHD3-203ENST00000448878 KRTAP4-9Q9BYQ8 210 aa7.07□□□□□ -1.28
CHCHD3-203ENST00000448878 H7BZZ5 65 aa7.04□□□□□ -1.28
CHCHD3-203ENST00000448878 CYSTM1Q9H1C7 97 aa7.03□□□□□ -1.28
CHCHD3-203ENST00000448878 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
CHCHD3-203ENST00000448878 TMEM258P61165 79 aa7□□□□□ -1.29
CHCHD3-203ENST00000448878 ATP5EP56381 51 aaPredicted RBP6.98□□□□□ -1.29
CHCHD3-203ENST00000448878 DMAC1Q96GE9 116 aa6.9□□□□□ -1.3
CHCHD3-203ENST00000448878 ACYP2P14621 99 aa6.88□□□□□ -1.31
CHCHD3-203ENST00000448878 KRTAP4-12Q9BQ66 201 aa6.88□□□□□ -1.31
CHCHD3-203ENST00000448878 LCE5AQ5TCM9 118 aa6.83□□□□□ -1.32
CHCHD3-203ENST00000448878 CHKB-CPT1BH3BT56 60 aa6.8□□□□□ -1.32
CHCHD3-203ENST00000448878 LCE1DQ5T752 114 aa6.8□□□□□ -1.32
CHCHD3-203ENST00000448878 KRTAP19-3Q7Z4W3 81 aa6.78□□□□□ -1.32
CHCHD3-203ENST00000448878 COA5Q86WW8 74 aa6.78□□□□□ -1.32
CHCHD3-203ENST00000448878 SERP1Q9Y6X1 66 aa6.78□□□□□ -1.32
CHCHD3-203ENST00000448878 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
CHCHD3-203ENST00000448878 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
CHCHD3-203ENST00000448878 MT4P47944 62 aa6.72□□□□□ -1.33
CHCHD3-203ENST00000448878 MT1EP04732 61 aa6.71□□□□□ -1.34
CHCHD3-203ENST00000448878 KRTAP9-9Q9BYP9 154 aa6.71□□□□□ -1.34
CHCHD3-203ENST00000448878 KRTAP9-4Q9BYQ2 154 aa6.71□□□□□ -1.34
CHCHD3-203ENST00000448878 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
CHCHD3-203ENST00000448878 RPS28P62857 69 aaKnown RBP6.69□□□□□ -1.34
CHCHD3-203ENST00000448878 LCE4AQ5TA78 99 aa6.64□□□□□ -1.35
CHCHD3-203ENST00000448878 SMIM26A0A096LP01 95 aa6.59□□□□□ -1.35
CHCHD3-203ENST00000448878 HMCN1Q96RW7 5635 aa6.58□□□□□ -1.36
CHCHD3-203ENST00000448878 MT1GP13640 62 aa6.56□□□□□ -1.36
CHCHD3-203ENST00000448878 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
CHCHD3-203ENST00000448878 V9GYY9 64 aa6.54□□□□□ -1.36
CHCHD3-203ENST00000448878 SEC61GP60059 68 aa6.51□□□□□ -1.37
CHCHD3-203ENST00000448878 KRTAP5-10Q6L8G5 202 aa6.51□□□□□ -1.37
CHCHD3-203ENST00000448878 A0A0D9SG42 100 aa6.49□□□□□ -1.37
CHCHD3-203ENST00000448878 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
CHCHD3-203ENST00000448878 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
CHCHD3-203ENST00000448878 AHNAK2Q8IVF2 5795 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms