RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 KRTAP1-4P0C5Y4 121 aa4.66□□□□□ -1.66
CPSF7-206ENST00000448745 Q8N1X5 172 aa4.66□□□□□ -1.66
CPSF7-206ENST00000448745 TYMSOSQ8TAI1 123 aa4.65□□□□□ -1.67
CPSF7-206ENST00000448745 KRTAP4-5Q9BYR2 181 aa4.65□□□□□ -1.67
CPSF7-206ENST00000448745 Q5VSD8 79 aa4.64□□□□□ -1.67
CPSF7-206ENST00000448745 RPS29P62273 56 aaKnown RBP4.63□□□□□ -1.67
CPSF7-206ENST00000448745 A8MUU9 505 aa4.62□□□□□ -1.67
CPSF7-206ENST00000448745 FLG2Q5D862 2391 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-206ENST00000448745 H0YAA0 97 aa4.6□□□□□ -1.67
CPSF7-206ENST00000448745 A0A1B0GU33 70 aa4.6□□□□□ -1.67
CPSF7-206ENST00000448745 H1FX-AS1Q4G0G2 97 aa4.6□□□□□ -1.67
CPSF7-206ENST00000448745 DMBT1Q9UGM3 2413 aaPredicted RBP4.59□□□□□ -1.67
CPSF7-206ENST00000448745 KRTAP25-1Q3LHN0 102 aa4.59□□□□□ -1.67
CPSF7-206ENST00000448745 LINC00304Q8N9R0 145 aa4.59□□□□□ -1.67
CPSF7-206ENST00000448745 PKHD1L1Q86WI1 4243 aa4.58□□□□□ -1.68
CPSF7-206ENST00000448745 K7ERS5 55 aa4.57□□□□□ -1.68
CPSF7-206ENST00000448745 LRP1Q07954 4544 aaKnown RBP4.56□□□□□ -1.68
CPSF7-206ENST00000448745 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
CPSF7-206ENST00000448745 MYCBP2O75592 4640 aa4.54□□□□□ -1.68
CPSF7-206ENST00000448745 MT1HL1P0DM35 61 aa4.5□□□□□ -1.69
CPSF7-206ENST00000448745 KRTAP3-1Q9BYR8 98 aa4.5□□□□□ -1.69
CPSF7-206ENST00000448745 FAT3Q8TDW7 4589 aa4.5□□□□□ -1.69
CPSF7-206ENST00000448745 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
CPSF7-206ENST00000448745 C9orf92A6NGG3 77 aa4.49□□□□□ -1.69
CPSF7-206ENST00000448745 COX6B2Q6YFQ2 88 aa4.49□□□□□ -1.69
CPSF7-206ENST00000448745 TNXBP22105 4242 aa4.48□□□□□ -1.69
CPSF7-206ENST00000448745 ROMO1P60602 79 aa4.48□□□□□ -1.69
CPSF7-206ENST00000448745 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
CPSF7-206ENST00000448745 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
CPSF7-206ENST00000448745 CRIPTQ9P021 101 aa4.35□□□□□ -1.71
CPSF7-206ENST00000448745 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
CPSF7-206ENST00000448745 HMCN2Q8NDA2 5059 aa4.35□□□□□ -1.71
CPSF7-206ENST00000448745 KRTAP9-2Q9BYQ4 174 aa4.34□□□□□ -1.71
CPSF7-206ENST00000448745 S4R3F8 94 aa4.32□□□□□ -1.72
CPSF7-206ENST00000448745 A0A0D9SG42 100 aa4.3□□□□□ -1.72
CPSF7-206ENST00000448745 P0C880 135 aa4.3□□□□□ -1.72
CPSF7-206ENST00000448745 KRTAP13-4Q3LI77 160 aa4.3□□□□□ -1.72
CPSF7-206ENST00000448745 SPINT4Q6UDR6 99 aa4.3□□□□□ -1.72
CPSF7-206ENST00000448745 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
CPSF7-206ENST00000448745 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
CPSF7-206ENST00000448745 LPAP08519 4548 aa4.22□□□□□ -1.73
CPSF7-206ENST00000448745 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
CPSF7-206ENST00000448745 XP32Q5T750 250 aa4.21□□□□□ -1.74
CPSF7-206ENST00000448745 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
CPSF7-206ENST00000448745 KRTAP12-2P59991 146 aa4.19□□□□□ -1.74
CPSF7-206ENST00000448745 LRP2P98164 4655 aa4.18□□□□□ -1.74
CPSF7-206ENST00000448745 MUC2Q02817 5179 aa4.18□□□□□ -1.74
CPSF7-206ENST00000448745 M0QZ58 72 aa4.18□□□□□ -1.74
CPSF7-206ENST00000448745 KRTAP12-1P59990 96 aa4.18□□□□□ -1.74
CPSF7-206ENST00000448745 KRTAP23-1A1A580 65 aa4.15□□□□□ -1.74
CPSF7-206ENST00000448745 FAT4Q6V0I7 4981 aa4.14□□□□□ -1.75
CPSF7-206ENST00000448745 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
CPSF7-206ENST00000448745 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
CPSF7-206ENST00000448745 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
CPSF7-206ENST00000448745 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
CPSF7-206ENST00000448745 SEC61BP60468 96 aaKnown RBP4.01□□□□□ -1.77
CPSF7-206ENST00000448745 CRCT1Q9UGL9 99 aa3.99□□□□□ -1.77
CPSF7-206ENST00000448745 R4GN34 69 aa3.99□□□□□ -1.77
CPSF7-206ENST00000448745 FSIP2Q5CZC0 6907 aa3.97□□□□□ -1.77
CPSF7-206ENST00000448745 PLAC4Q8WY50 150 aa3.95□□□□□ -1.78
CPSF7-206ENST00000448745 KRTAP19-2Q3LHN2 52 aa3.94□□□□□ -1.78
CPSF7-206ENST00000448745 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
CPSF7-206ENST00000448745 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
CPSF7-206ENST00000448745 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
CPSF7-206ENST00000448745 KRTAP9-7A8MTY7 169 aa3.87□□□□□ -1.79
CPSF7-206ENST00000448745 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
CPSF7-206ENST00000448745 A0A0A0MQY5 61 aa3.84□□□□□ -1.8
CPSF7-206ENST00000448745 CAMK2N1Q7Z7J9 78 aa3.83□□□□□ -1.8
CPSF7-206ENST00000448745 KRTAP19-1Q8IUB9 90 aa3.82□□□□□ -1.8
CPSF7-206ENST00000448745 FLGP20930 4061 aaPredicted RBP3.79□□□□□ -1.8
CPSF7-206ENST00000448745 MT1HP80294 61 aa3.79□□□□□ -1.8
CPSF7-206ENST00000448745 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
CPSF7-206ENST00000448745 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.75□□□□□ -1.81
CPSF7-206ENST00000448745 KRTAP4-8Q9BYQ9 185 aa3.74□□□□□ -1.81
CPSF7-206ENST00000448745 TNP1P09430 55 aa3.73□□□□□ -1.81
CPSF7-206ENST00000448745 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
CPSF7-206ENST00000448745 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
CPSF7-206ENST00000448745 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.82
CPSF7-206ENST00000448745 M0R2T5 61 aa3.64□□□□□ -1.83
CPSF7-206ENST00000448745 MT2AP02795 61 aa3.61□□□□□ -1.83
CPSF7-206ENST00000448745 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
CPSF7-206ENST00000448745 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
CPSF7-206ENST00000448745 MT1FP04733 61 aa3.58□□□□□ -1.84
CPSF7-206ENST00000448745 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
CPSF7-206ENST00000448745 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
CPSF7-206ENST00000448745 KRTAP9-3Q9BYQ3 159 aa3.55□□□□□ -1.84
CPSF7-206ENST00000448745 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
CPSF7-206ENST00000448745 SPRR2GQ9BYE4 73 aa3.5□□□□□ -1.85
CPSF7-206ENST00000448745 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.86
CPSF7-206ENST00000448745 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
CPSF7-206ENST00000448745 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
CPSF7-206ENST00000448745 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
CPSF7-206ENST00000448745 PRO2289Q9P1D8 64 aa3.44□□□□□ -1.86
CPSF7-206ENST00000448745 INE1O15225 51 aa3.43□□□□□ -1.86
CPSF7-206ENST00000448745 USH2AO75445 5202 aa3.42□□□□□ -1.86
CPSF7-206ENST00000448745 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
CPSF7-206ENST00000448745 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.87
CPSF7-206ENST00000448745 KRTAP19-8Q3LI54 63 aa3.39□□□□□ -1.87
CPSF7-206ENST00000448745 MT1BP07438 61 aa3.37□□□□□ -1.87
CPSF7-206ENST00000448745 LCE1DQ5T752 114 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms