RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 FCGBPQ9Y6R7 5405 aaPredicted RBP5.81□□□□□ -1.48
PRPF40A-203ENST00000448428 OCR1Q9BZK8 76 aa5.78□□□□□ -1.48
PRPF40A-203ENST00000448428 LINC00208Q96KT6 92 aa5.77□□□□□ -1.49
PRPF40A-203ENST00000448428 J3QR89 54 aa5.76□□□□□ -1.49
PRPF40A-203ENST00000448428 KLKP1Q107X0 134 aa5.74□□□□□ -1.49
PRPF40A-203ENST00000448428 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
PRPF40A-203ENST00000448428 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
PRPF40A-203ENST00000448428 MP68P56378 58 aa5.72□□□□□ -1.49
PRPF40A-203ENST00000448428 A8MUN3 132 aa5.7□□□□□ -1.5
PRPF40A-203ENST00000448428 NDUFC1O43677 76 aa5.7□□□□□ -1.5
PRPF40A-203ENST00000448428 MT1BP07438 61 aa5.7□□□□□ -1.5
PRPF40A-203ENST00000448428 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
PRPF40A-203ENST00000448428 Q5VV11 94 aa5.68□□□□□ -1.5
PRPF40A-203ENST00000448428 IMUPQ9GZP8 106 aa5.68□□□□□ -1.5
PRPF40A-203ENST00000448428 SCGB1A1P11684 91 aa5.66□□□□□ -1.5
PRPF40A-203ENST00000448428 H3BPC8 53 aa5.65□□□□□ -1.5
PRPF40A-203ENST00000448428 CRIPTQ9P021 101 aa5.65□□□□□ -1.5
PRPF40A-203ENST00000448428 H0YAA0 97 aa5.63□□□□□ -1.51
PRPF40A-203ENST00000448428 A6NN06 94 aa5.6□□□□□ -1.51
PRPF40A-203ENST00000448428 MT-ATP8P03928 68 aa5.59□□□□□ -1.51
PRPF40A-203ENST00000448428 ADM2Q7Z4H4 148 aa5.59□□□□□ -1.51
PRPF40A-203ENST00000448428 DMAC1Q96GE9 116 aa5.57□□□□□ -1.52
PRPF40A-203ENST00000448428 K7ERU9 68 aa5.56□□□□□ -1.52
PRPF40A-203ENST00000448428 KRTAP10-5P60370 271 aa5.55□□□□□ -1.52
PRPF40A-203ENST00000448428 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
PRPF40A-203ENST00000448428 KRTAP6-3Q3LI67 103 aa5.53□□□□□ -1.52
PRPF40A-203ENST00000448428 TRAV7A0A075B6U4 112 aa5.51□□□□□ -1.53
PRPF40A-203ENST00000448428 SMIM20Q8N5G0 67 aa5.5□□□□□ -1.53
PRPF40A-203ENST00000448428 P0C880 135 aa5.48□□□□□ -1.53
PRPF40A-203ENST00000448428 ACYP2P14621 99 aa5.45□□□□□ -1.54
PRPF40A-203ENST00000448428 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
PRPF40A-203ENST00000448428 C20orf197Q8N268 126 aa5.43□□□□□ -1.54
PRPF40A-203ENST00000448428 R4GN34 69 aa5.43□□□□□ -1.54
PRPF40A-203ENST00000448428 SNURFQ9Y675 71 aa5.41□□□□□ -1.54
PRPF40A-203ENST00000448428 M0QZ58 72 aa5.39□□□□□ -1.55
PRPF40A-203ENST00000448428 LCE3BQ5TA77 95 aa5.39□□□□□ -1.55
PRPF40A-203ENST00000448428 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
PRPF40A-203ENST00000448428 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
PRPF40A-203ENST00000448428 MT1XP80297 61 aa5.36□□□□□ -1.55
PRPF40A-203ENST00000448428 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
PRPF40A-203ENST00000448428 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
PRPF40A-203ENST00000448428 SPTSSBQ8NFR3 76 aa5.35□□□□□ -1.55
PRPF40A-203ENST00000448428 SERP2Q8N6R1 65 aa5.34□□□□□ -1.55
PRPF40A-203ENST00000448428 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
PRPF40A-203ENST00000448428 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
PRPF40A-203ENST00000448428 LINC01554Q52M75 96 aa5.32□□□□□ -1.56
PRPF40A-203ENST00000448428 SPANXA2-OT1Q8N9U9 137 aa5.31□□□□□ -1.56
PRPF40A-203ENST00000448428 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
PRPF40A-203ENST00000448428 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
PRPF40A-203ENST00000448428 KRTAP12-2P59991 146 aa5.2□□□□□ -1.58
PRPF40A-203ENST00000448428 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
PRPF40A-203ENST00000448428 COX7CP15954 63 aa5.18□□□□□ -1.58
PRPF40A-203ENST00000448428 COA5Q86WW8 74 aa5.17□□□□□ -1.58
PRPF40A-203ENST00000448428 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
PRPF40A-203ENST00000448428 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
PRPF40A-203ENST00000448428 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.59
PRPF40A-203ENST00000448428 KRTAP13-4Q3LI77 160 aa5.14□□□□□ -1.59
PRPF40A-203ENST00000448428 KRTAP10-7P60409 375 aaPredicted RBP5.12□□□□□ -1.59
PRPF40A-203ENST00000448428 CYSTM1Q9H1C7 97 aa5.12□□□□□ -1.59
PRPF40A-203ENST00000448428 H7BZZ5 65 aa5.11□□□□□ -1.59
PRPF40A-203ENST00000448428 NEBP20929 6669 aa5.11□□□□□ -1.59
PRPF40A-203ENST00000448428 KMT2DO14686 5537 aa5.11□□□□□ -1.59
PRPF40A-203ENST00000448428 KRTAP10-12P60413 245 aa5.09□□□□□ -1.59
PRPF40A-203ENST00000448428 KRTAP20-1Q3LI63 56 aa5.09□□□□□ -1.59
PRPF40A-203ENST00000448428 SPRR2EP22531 72 aa5.06□□□□□ -1.6
PRPF40A-203ENST00000448428 SPRR2BP35325 72 aa5.06□□□□□ -1.6
PRPF40A-203ENST00000448428 SPRR2AP35326 72 aa5.06□□□□□ -1.6
PRPF40A-203ENST00000448428 SEC61GP60059 68 aa5.05□□□□□ -1.6
PRPF40A-203ENST00000448428 SERP1Q9Y6X1 66 aa5.04□□□□□ -1.6
PRPF40A-203ENST00000448428 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
PRPF40A-203ENST00000448428 LCE1AQ5T7P2 110 aa5.02□□□□□ -1.61
PRPF40A-203ENST00000448428 ANAPC13Q9BS18 74 aa5.01□□□□□ -1.61
PRPF40A-203ENST00000448428 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
PRPF40A-203ENST00000448428 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
PRPF40A-203ENST00000448428 SPATA8Q6RVD6 105 aa4.99□□□□□ -1.61
PRPF40A-203ENST00000448428 CAMK2N1Q7Z7J9 78 aa4.99□□□□□ -1.61
PRPF40A-203ENST00000448428 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
PRPF40A-203ENST00000448428 A0A0D9SG42 100 aa4.98□□□□□ -1.61
PRPF40A-203ENST00000448428 A0A1B0GU33 70 aa4.98□□□□□ -1.61
PRPF40A-203ENST00000448428 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
PRPF40A-203ENST00000448428 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
PRPF40A-203ENST00000448428 CCDC179H3BU77 68 aa4.93□□□□□ -1.62
PRPF40A-203ENST00000448428 A0A1B0GU69 56 aa4.9□□□□□ -1.63
PRPF40A-203ENST00000448428 SPINT4Q6UDR6 99 aa4.9□□□□□ -1.63
PRPF40A-203ENST00000448428 SPRR2DP22532 72 aa4.89□□□□□ -1.63
PRPF40A-203ENST00000448428 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
PRPF40A-203ENST00000448428 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
PRPF40A-203ENST00000448428 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
PRPF40A-203ENST00000448428 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
PRPF40A-203ENST00000448428 SMIM26A0A096LP01 95 aa4.82□□□□□ -1.64
PRPF40A-203ENST00000448428 ATP5EP56381 51 aaPredicted RBP4.82□□□□□ -1.64
PRPF40A-203ENST00000448428 A8MU10 97 aa4.81□□□□□ -1.64
PRPF40A-203ENST00000448428 KRTAP19-7Q3SYF9 63 aa4.79□□□□□ -1.64
PRPF40A-203ENST00000448428 PRR15LQ9BU68 103 aa4.75□□□□□ -1.65
PRPF40A-203ENST00000448428 LINC01558Q9Y6Z2 57 aa4.74□□□□□ -1.65
PRPF40A-203ENST00000448428 MT1EP04732 61 aa4.73□□□□□ -1.65
PRPF40A-203ENST00000448428 TMEM258P61165 79 aa4.72□□□□□ -1.65
PRPF40A-203ENST00000448428 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
PRPF40A-203ENST00000448428 LCE5AQ5TCM9 118 aa4.7□□□□□ -1.66
PRPF40A-203ENST00000448428 KRTAP19-5Q3LI72 72 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms