RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 S4R3F8 94 aa12.25□□□□□ -0.45
RFFL-206ENST00000447669 RPS28P62857 69 aaKnown RBP12.24□□□□□ -0.45
RFFL-206ENST00000447669 LCE2CQ5TA81 110 aa12.23□□□□□ -0.45
RFFL-206ENST00000447669 KRTAP3-3Q9BYR6 98 aa12.23□□□□□ -0.45
RFFL-206ENST00000447669 FLGP20930 4061 aaPredicted RBP12.18□□□□□ -0.46
RFFL-206ENST00000447669 SMIM26A0A096LP01 95 aa12.03□□□□□ -0.48
RFFL-206ENST00000447669 MT1HP80294 61 aa11.98□□□□□ -0.49
RFFL-206ENST00000447669 SPTSSBQ8NFR3 76 aa11.98□□□□□ -0.49
RFFL-206ENST00000447669 CSAG1Q6PB30 78 aa11.96□□□□□ -0.5
RFFL-206ENST00000447669 Q1T7F1 81 aa11.86□□□□□ -0.51
RFFL-206ENST00000447669 M0R2T5 61 aa11.86□□□□□ -0.51
RFFL-206ENST00000447669 LINC01558Q9Y6Z2 57 aa11.85□□□□□ -0.51
RFFL-206ENST00000447669 PSPHP1O15172 72 aa11.82□□□□□ -0.52
RFFL-206ENST00000447669 PRR15LQ9BU68 103 aa11.78□□□□□ -0.52
RFFL-206ENST00000447669 A0A1B0GU69 56 aa11.76□□□□□ -0.53
RFFL-206ENST00000447669 ADM2Q7Z4H4 148 aa11.74□□□□□ -0.53
RFFL-206ENST00000447669 KRTAP3-2Q9BYR7 98 aa11.74□□□□□ -0.53
RFFL-206ENST00000447669 V9GYY9 64 aa11.74□□□□□ -0.53
RFFL-206ENST00000447669 P0C880 135 aa11.7□□□□□ -0.54
RFFL-206ENST00000447669 KRTAP10-6P60371 365 aaPredicted RBP11.69□□□□□ -0.54
RFFL-206ENST00000447669 SEC61GP60059 68 aa11.67□□□□□ -0.54
RFFL-206ENST00000447669 Q5VV11 94 aa11.64□□□□□ -0.55
RFFL-206ENST00000447669 LCE2AQ5TA79 106 aaPredicted RBP11.61□□□□□ -0.55
RFFL-206ENST00000447669 H0YAA0 97 aa11.59□□□□□ -0.55
RFFL-206ENST00000447669 LORP23490 312 aaPredicted RBP11.55□□□□□ -0.56
RFFL-206ENST00000447669 KRTAP9-8Q9BYQ0 159 aa11.52□□□□□ -0.57
RFFL-206ENST00000447669 A0A1B0GU33 70 aa11.47□□□□□ -0.57
RFFL-206ENST00000447669 MT2AP02795 61 aa11.46□□□□□ -0.57
RFFL-206ENST00000447669 MT1FP04733 61 aa11.42□□□□□ -0.58
RFFL-206ENST00000447669 KRTAP13-4Q3LI77 160 aa11.42□□□□□ -0.58
RFFL-206ENST00000447669 SPATA8Q6RVD6 105 aa11.42□□□□□ -0.58
RFFL-206ENST00000447669 A6NED7 52 aa11.37□□□□□ -0.59
RFFL-206ENST00000447669 KRTAP10-10P60014 251 aa11.36□□□□□ -0.59
RFFL-206ENST00000447669 UQCR11O14957 56 aa11.33□□□□□ -0.6
RFFL-206ENST00000447669 M0QZ58 72 aa11.29□□□□□ -0.6
RFFL-206ENST00000447669 A8MU10 97 aa11.28□□□□□ -0.6
RFFL-206ENST00000447669 R4GN34 69 aa11.28□□□□□ -0.6
RFFL-206ENST00000447669 MIR22HGQ0VDD5 57 aa11.23□□□□□ -0.61
RFFL-206ENST00000447669 A0A0D9SG42 100 aa11.19□□□□□ -0.62
RFFL-206ENST00000447669 LINC01554Q52M75 96 aa11.19□□□□□ -0.62
RFFL-206ENST00000447669 BRK1Q8WUW1 75 aa11.14□□□□□ -0.63
RFFL-206ENST00000447669 KRTAP19-1Q8IUB9 90 aa11.13□□□□□ -0.63
RFFL-206ENST00000447669 CRIPTQ9P021 101 aa11.12□□□□□ -0.63
RFFL-206ENST00000447669 KRTAP9-3Q9BYQ3 159 aa11.09□□□□□ -0.63
RFFL-206ENST00000447669 CDC42SE1Q9NRR8 79 aa11.08□□□□□ -0.64
RFFL-206ENST00000447669 SPRR2GQ9BYE4 73 aa11.06□□□□□ -0.64
RFFL-206ENST00000447669 KRTAP12-2P59991 146 aa10.91□□□□□ -0.66
RFFL-206ENST00000447669 SPINT4Q6UDR6 99 aa10.9□□□□□ -0.66
RFFL-206ENST00000447669 KRTAP12-1P59990 96 aa10.89□□□□□ -0.67
RFFL-206ENST00000447669 LCE2BO14633 110 aa10.87□□□□□ -0.67
RFFL-206ENST00000447669 KRTAP19-8Q3LI54 63 aa10.79□□□□□ -0.68
RFFL-206ENST00000447669 MT1BP07438 61 aa10.75□□□□□ -0.69
RFFL-206ENST00000447669 A6NN06 94 aa10.72□□□□□ -0.69
RFFL-206ENST00000447669 USH2AO75445 5202 aa10.71□□□□□ -0.69
RFFL-206ENST00000447669 PRO0628Q9UI54 55 aa10.69□□□□□ -0.7
RFFL-206ENST00000447669 SVIPQ8NHG7 77 aa10.65□□□□□ -0.71
RFFL-206ENST00000447669 K7ERS5 55 aa10.64□□□□□ -0.71
RFFL-206ENST00000447669 PLAC4Q8WY50 150 aa10.64□□□□□ -0.71
RFFL-206ENST00000447669 FSIP2Q5CZC0 6907 aa10.57□□□□□ -0.72
RFFL-206ENST00000447669 CAMK2N1Q7Z7J9 78 aa10.55□□□□□ -0.72
RFFL-206ENST00000447669 LCE2DQ5TA82 110 aaPredicted RBP10.52□□□□□ -0.73
RFFL-206ENST00000447669 PMAIP1Q13794 54 aa10.5□□□□□ -0.73
RFFL-206ENST00000447669 SSPOA2VEC9 5147 aa10.4□□□□□ -0.74
RFFL-206ENST00000447669 MT1XP80297 61 aa10.36□□□□□ -0.75
RFFL-206ENST00000447669 C10orf95Q9H7T3 257 aa10.36□□□□□ -0.75
RFFL-206ENST00000447669 KRTAP10-5P60370 271 aa10.34□□□□□ -0.75
RFFL-206ENST00000447669 KRTAP9-2Q9BYQ4 174 aa10.34□□□□□ -0.75
RFFL-206ENST00000447669 ROMO1P60602 79 aa10.25□□□□□ -0.77
RFFL-206ENST00000447669 KRTAP19-6Q3LI70 58 aa10.13□□□□□ -0.79
RFFL-206ENST00000447669 PRO2289Q9P1D8 64 aa10.12□□□□□ -0.79
RFFL-206ENST00000447669 KRTAP10-7P60409 375 aaPredicted RBP10□□□□□ -0.81
RFFL-206ENST00000447669 PRAC1Q96KF2 57 aa9.98□□□□□ -0.81
RFFL-206ENST00000447669 FCGBPQ9Y6R7 5405 aaPredicted RBP9.97□□□□□ -0.81
RFFL-206ENST00000447669 TNP1P09430 55 aa9.95□□□□□ -0.82
RFFL-206ENST00000447669 KTN1-AS1Q86SY8 53 aa9.94□□□□□ -0.82
RFFL-206ENST00000447669 CRCT1Q9UGL9 99 aa9.91□□□□□ -0.82
RFFL-206ENST00000447669 KRTAP25-1Q3LHN0 102 aa9.89□□□□□ -0.83
RFFL-206ENST00000447669 KMT2DO14686 5537 aa9.86□□□□□ -0.83
RFFL-206ENST00000447669 KRTAP10-12P60413 245 aa9.76□□□□□ -0.85
RFFL-206ENST00000447669 KRTAP4-8A0A0G2JLE6 195 aa9.71□□□□□ -0.86
RFFL-206ENST00000447669 KRTAP4-8Q9BYQ9 185 aa9.71□□□□□ -0.86
RFFL-206ENST00000447669 LCE3AQ5TA76 89 aa9.69□□□□□ -0.86
RFFL-206ENST00000447669 KRTAP9-6A0A140TA67 174 aa9.55□□□□□ -0.88
RFFL-206ENST00000447669 MACF1Q9UPN3 7388 aaKnown RBP9.54□□□□□ -0.88
RFFL-206ENST00000447669 KRTAP23-1A1A580 65 aa9.46□□□□□ -0.9
RFFL-206ENST00000447669 PP632Q6XCG6 107 aa9.45□□□□□ -0.9
RFFL-206ENST00000447669 KRTAP8-1Q8IUC2 63 aa9.36□□□□□ -0.91
RFFL-206ENST00000447669 SYNE2Q8WXH0 6885 aaKnown RBP9.35□□□□□ -0.91
RFFL-206ENST00000447669 KRTAP19-5Q3LI72 72 aa9.34□□□□□ -0.91
RFFL-206ENST00000447669 KRTAP12-3P60328 96 aa9.25□□□□□ -0.93
RFFL-206ENST00000447669 KRTAP19-7Q3SYF9 63 aa9.25□□□□□ -0.93
RFFL-206ENST00000447669 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.19□□□□□ -0.94
RFFL-206ENST00000447669 MUC12Q9UKN1 5478 aa9.12□□□□□ -0.95
RFFL-206ENST00000447669 SPRR2FQ96RM1 72 aa9.07□□□□□ -0.96
RFFL-206ENST00000447669 MT1EP04732 61 aa9.07□□□□□ -0.96
RFFL-206ENST00000447669 KRTAP15-1Q3LI76 137 aa8.99□□□□□ -0.97
RFFL-206ENST00000447669 KRTAP5-9P26371 169 aa8.93□□□□□ -0.98
RFFL-206ENST00000447669 MT1LQ93083 61 aa8.87□□□□□ -0.99
RFFL-206ENST00000447669 MDN1Q9NU22 5596 aa8.85□□□□□ -0.99
RFFL-206ENST00000447669 KRTAP6-3Q3LI67 103 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms