RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 KRTAP1-4P0C5Y4 121 aa7.41□□□□□ -1.22
DDX56-206ENST00000446987 LINC00304Q8N9R0 145 aa7.39□□□□□ -1.23
DDX56-206ENST00000446987 IGKV2D-30A0A075B6S6 120 aa7.36□□□□□ -1.23
DDX56-206ENST00000446987 P0C880 135 aa7.36□□□□□ -1.23
DDX56-206ENST00000446987 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
DDX56-206ENST00000446987 J3QL48 77 aa7.34□□□□□ -1.23
DDX56-206ENST00000446987 H0YAA0 97 aa7.31□□□□□ -1.24
DDX56-206ENST00000446987 HMCN2Q8NDA2 5059 aa7.3□□□□□ -1.24
DDX56-206ENST00000446987 ANAPC11Q9NYG5 84 aa7.3□□□□□ -1.24
DDX56-206ENST00000446987 KRTAP13-2Q52LG2 175 aa7.26□□□□□ -1.25
DDX56-206ENST00000446987 K7ERS5 55 aa7.23□□□□□ -1.25
DDX56-206ENST00000446987 KRTAP16-1A8MUX0 517 aa7.21□□□□□ -1.26
DDX56-206ENST00000446987 SSBP3-AS1Q7Z2R9 100 aa7.21□□□□□ -1.26
DDX56-206ENST00000446987 A0A1B0GU33 70 aa7.2□□□□□ -1.26
DDX56-206ENST00000446987 H1FX-AS1Q4G0G2 97 aa7.17□□□□□ -1.26
DDX56-206ENST00000446987 TYMSOSQ8TAI1 123 aa7.17□□□□□ -1.26
DDX56-206ENST00000446987 C20orf166-AS1Q96NR2 134 aa7.14□□□□□ -1.27
DDX56-206ENST00000446987 A0A0A0MQY5 61 aa7.11□□□□□ -1.27
DDX56-206ENST00000446987 LRP2P98164 4655 aa7.1□□□□□ -1.27
DDX56-206ENST00000446987 SPINK1P00995 79 aa7.09□□□□□ -1.27
DDX56-206ENST00000446987 LPAP08519 4548 aa7.09□□□□□ -1.27
DDX56-206ENST00000446987 KRTAP15-1Q3LI76 137 aa7.09□□□□□ -1.28
DDX56-206ENST00000446987 SPINT4Q6UDR6 99 aa7.09□□□□□ -1.28
DDX56-206ENST00000446987 NDUFAF8A1L188 74 aa7.04□□□□□ -1.28
DDX56-206ENST00000446987 UBR4Q5T4S7 5183 aa7.03□□□□□ -1.28
DDX56-206ENST00000446987 CRIPTQ9P021 101 aa6.99□□□□□ -1.29
DDX56-206ENST00000446987 COX6B2Q6YFQ2 88 aa6.98□□□□□ -1.29
DDX56-206ENST00000446987 RPS29P62273 56 aaKnown RBP6.97□□□□□ -1.29
DDX56-206ENST00000446987 TPRXLQ17RH7 258 aa6.96□□□□□ -1.29
DDX56-206ENST00000446987 RPL37P61927 97 aaKnown RBP6.94□□□□□ -1.3
DDX56-206ENST00000446987 RNF213Q63HN8 5207 aa6.87□□□□□ -1.31
DDX56-206ENST00000446987 MUC17Q685J3 4493 aa6.85□□□□□ -1.31
DDX56-206ENST00000446987 KRTAP3-1Q9BYR8 98 aa6.84□□□□□ -1.31
DDX56-206ENST00000446987 LUZP6Q538Z0 58 aa6.75□□□□□ -1.33
DDX56-206ENST00000446987 MUC2Q02817 5179 aa6.74□□□□□ -1.33
DDX56-206ENST00000446987 XP32Q5T750 250 aa6.73□□□□□ -1.33
DDX56-206ENST00000446987 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.34
DDX56-206ENST00000446987 C9orf92A6NGG3 77 aa6.7□□□□□ -1.34
DDX56-206ENST00000446987 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
DDX56-206ENST00000446987 KRTAP4-1Q9BYQ7 146 aa6.65□□□□□ -1.34
DDX56-206ENST00000446987 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
DDX56-206ENST00000446987 S4R3F8 94 aa6.64□□□□□ -1.35
DDX56-206ENST00000446987 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
DDX56-206ENST00000446987 A0A0D9SG42 100 aa6.59□□□□□ -1.35
DDX56-206ENST00000446987 SEC61BP60468 96 aaKnown RBP6.58□□□□□ -1.36
DDX56-206ENST00000446987 FAT4Q6V0I7 4981 aa6.57□□□□□ -1.36
DDX56-206ENST00000446987 KRTAP3-3Q9BYR6 98 aa6.53□□□□□ -1.36
DDX56-206ENST00000446987 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
DDX56-206ENST00000446987 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
DDX56-206ENST00000446987 KRTAP19-2Q3LHN2 52 aa6.48□□□□□ -1.37
DDX56-206ENST00000446987 PLAC4Q8WY50 150 aa6.44□□□□□ -1.38
DDX56-206ENST00000446987 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
DDX56-206ENST00000446987 LCE2CQ5TA81 110 aa6.43□□□□□ -1.38
DDX56-206ENST00000446987 M0QZ58 72 aa6.39□□□□□ -1.39
DDX56-206ENST00000446987 FLGP20930 4061 aaPredicted RBP6.34□□□□□ -1.39
DDX56-206ENST00000446987 MT1HP80294 61 aa6.29□□□□□ -1.4
DDX56-206ENST00000446987 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
DDX56-206ENST00000446987 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
DDX56-206ENST00000446987 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
DDX56-206ENST00000446987 M0R2T5 61 aa6.06□□□□□ -1.44
DDX56-206ENST00000446987 PRO2289Q9P1D8 64 aa6.05□□□□□ -1.44
DDX56-206ENST00000446987 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
DDX56-206ENST00000446987 KRTAP9-2Q9BYQ4 174 aa6.02□□□□□ -1.45
DDX56-206ENST00000446987 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
DDX56-206ENST00000446987 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.45
DDX56-206ENST00000446987 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
DDX56-206ENST00000446987 MT2AP02795 61 aa5.94□□□□□ -1.46
DDX56-206ENST00000446987 R4GN34 69 aa5.94□□□□□ -1.46
DDX56-206ENST00000446987 MT1FP04733 61 aa5.9□□□□□ -1.46
DDX56-206ENST00000446987 INE1O15225 51 aa5.88□□□□□ -1.47
DDX56-206ENST00000446987 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
DDX56-206ENST00000446987 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
DDX56-206ENST00000446987 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
DDX56-206ENST00000446987 USH2AO75445 5202 aa5.77□□□□□ -1.49
DDX56-206ENST00000446987 LCE2BO14633 110 aa5.75□□□□□ -1.49
DDX56-206ENST00000446987 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
DDX56-206ENST00000446987 CRCT1Q9UGL9 99 aa5.71□□□□□ -1.5
DDX56-206ENST00000446987 SSPOA2VEC9 5147 aa5.68□□□□□ -1.5
DDX56-206ENST00000446987 TNP1P09430 55 aa5.66□□□□□ -1.5
DDX56-206ENST00000446987 KRTAP19-1Q8IUB9 90 aa5.62□□□□□ -1.51
DDX56-206ENST00000446987 SPRR2GQ9BYE4 73 aa5.54□□□□□ -1.52
DDX56-206ENST00000446987 FCGBPQ9Y6R7 5405 aaPredicted RBP5.5□□□□□ -1.53
DDX56-206ENST00000446987 MT1BP07438 61 aa5.49□□□□□ -1.53
DDX56-206ENST00000446987 KRTAP19-8Q3LI54 63 aa5.49□□□□□ -1.53
DDX56-206ENST00000446987 KRTAP19-6Q3LI70 58 aa5.47□□□□□ -1.53
DDX56-206ENST00000446987 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
DDX56-206ENST00000446987 KRTAP10-5P60370 271 aa5.28□□□□□ -1.56
DDX56-206ENST00000446987 MACF1Q9UPN3 7388 aaKnown RBP5.26□□□□□ -1.57
DDX56-206ENST00000446987 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
DDX56-206ENST00000446987 MT1XP80297 61 aa5.19□□□□□ -1.58
DDX56-206ENST00000446987 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
DDX56-206ENST00000446987 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
DDX56-206ENST00000446987 SYNE2Q8WXH0 6885 aaKnown RBP5.12□□□□□ -1.59
DDX56-206ENST00000446987 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
DDX56-206ENST00000446987 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
DDX56-206ENST00000446987 KMT2DO14686 5537 aa5.02□□□□□ -1.61
DDX56-206ENST00000446987 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
DDX56-206ENST00000446987 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
DDX56-206ENST00000446987 KRTAP5-9P26371 169 aa4.93□□□□□ -1.62
DDX56-206ENST00000446987 MUC12Q9UKN1 5478 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms