RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 CYSTM1Q9H1C7 97 aa4.96□□□□□ -1.62
LIN54-203ENST00000446851 PCP4P48539 62 aa4.95□□□□□ -1.62
LIN54-203ENST00000446851 KRTAP10-6P60371 365 aaPredicted RBP4.95□□□□□ -1.62
LIN54-203ENST00000446851 LCE2AQ5TA79 106 aaPredicted RBP4.93□□□□□ -1.62
LIN54-203ENST00000446851 DMAC1Q96GE9 116 aa4.93□□□□□ -1.62
LIN54-203ENST00000446851 SEC61GP60059 68 aa4.92□□□□□ -1.62
LIN54-203ENST00000446851 ADM2Q7Z4H4 148 aa4.92□□□□□ -1.62
LIN54-203ENST00000446851 COA5Q86WW8 74 aa4.92□□□□□ -1.62
LIN54-203ENST00000446851 H7BZZ5 65 aa4.9□□□□□ -1.62
LIN54-203ENST00000446851 SERP1Q9Y6X1 66 aa4.88□□□□□ -1.63
LIN54-203ENST00000446851 R4GN34 69 aa4.86□□□□□ -1.63
LIN54-203ENST00000446851 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
LIN54-203ENST00000446851 FLGP20930 4061 aaPredicted RBP4.85□□□□□ -1.63
LIN54-203ENST00000446851 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.63
LIN54-203ENST00000446851 MT2AP02795 61 aa4.83□□□□□ -1.64
LIN54-203ENST00000446851 M0QZ58 72 aa4.82□□□□□ -1.64
LIN54-203ENST00000446851 MT1FP04733 61 aa4.81□□□□□ -1.64
LIN54-203ENST00000446851 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
LIN54-203ENST00000446851 KRTAP3-3Q9BYR6 98 aa4.8□□□□□ -1.64
LIN54-203ENST00000446851 A0A0D9SG42 100 aa4.78□□□□□ -1.64
LIN54-203ENST00000446851 TMEM258P61165 79 aa4.78□□□□□ -1.64
LIN54-203ENST00000446851 P0C880 135 aa4.78□□□□□ -1.64
LIN54-203ENST00000446851 KRTAP9-8Q9BYQ0 159 aa4.77□□□□□ -1.65
LIN54-203ENST00000446851 A0A1B0GU69 56 aa4.77□□□□□ -1.65
LIN54-203ENST00000446851 LCE2DQ5TA82 110 aaPredicted RBP4.77□□□□□ -1.65
LIN54-203ENST00000446851 ATP5EP56381 51 aaPredicted RBP4.74□□□□□ -1.65
LIN54-203ENST00000446851 USH2AO75445 5202 aa4.73□□□□□ -1.65
LIN54-203ENST00000446851 PSPHP1O15172 72 aa4.69□□□□□ -1.66
LIN54-203ENST00000446851 PRR15LQ9BU68 103 aa4.69□□□□□ -1.66
LIN54-203ENST00000446851 SPINT4Q6UDR6 99 aa4.68□□□□□ -1.66
LIN54-203ENST00000446851 PLAC4Q8WY50 150 aa4.67□□□□□ -1.66
LIN54-203ENST00000446851 KRTAP3-2Q9BYR7 98 aa4.67□□□□□ -1.66
LIN54-203ENST00000446851 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
LIN54-203ENST00000446851 A0A1B0GU33 70 aa4.65□□□□□ -1.66
LIN54-203ENST00000446851 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
LIN54-203ENST00000446851 Q5VV11 94 aa4.63□□□□□ -1.67
LIN54-203ENST00000446851 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
LIN54-203ENST00000446851 LCE2BO14633 110 aa4.6□□□□□ -1.67
LIN54-203ENST00000446851 CRCT1Q9UGL9 99 aa4.6□□□□□ -1.67
LIN54-203ENST00000446851 CRIPTQ9P021 101 aa4.58□□□□□ -1.68
LIN54-203ENST00000446851 H0YAA0 97 aa4.57□□□□□ -1.68
LIN54-203ENST00000446851 A6NN06 94 aa4.56□□□□□ -1.68
LIN54-203ENST00000446851 A6NED7 52 aa4.56□□□□□ -1.68
LIN54-203ENST00000446851 A8MU10 97 aa4.54□□□□□ -1.68
LIN54-203ENST00000446851 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
LIN54-203ENST00000446851 SMIM26A0A096LP01 95 aa4.53□□□□□ -1.68
LIN54-203ENST00000446851 KRTAP9-6A0A140TA67 174 aa4.53□□□□□ -1.68
LIN54-203ENST00000446851 V9GYY9 64 aa4.51□□□□□ -1.69
LIN54-203ENST00000446851 UQCR11O14957 56 aa4.51□□□□□ -1.69
LIN54-203ENST00000446851 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
LIN54-203ENST00000446851 LINC01558Q9Y6Z2 57 aa4.48□□□□□ -1.69
LIN54-203ENST00000446851 K7ERS5 55 aa4.47□□□□□ -1.69
LIN54-203ENST00000446851 SPRR2GQ9BYE4 73 aa4.47□□□□□ -1.69
LIN54-203ENST00000446851 SSPOA2VEC9 5147 aa4.46□□□□□ -1.69
LIN54-203ENST00000446851 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.7
LIN54-203ENST00000446851 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
LIN54-203ENST00000446851 MT1BP07438 61 aa4.4□□□□□ -1.7
LIN54-203ENST00000446851 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
LIN54-203ENST00000446851 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
LIN54-203ENST00000446851 Q1T7F1 81 aa4.36□□□□□ -1.71
LIN54-203ENST00000446851 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
LIN54-203ENST00000446851 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
LIN54-203ENST00000446851 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
LIN54-203ENST00000446851 KRTAP12-2P59991 146 aa4.33□□□□□ -1.72
LIN54-203ENST00000446851 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
LIN54-203ENST00000446851 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
LIN54-203ENST00000446851 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
LIN54-203ENST00000446851 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
LIN54-203ENST00000446851 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
LIN54-203ENST00000446851 MT1XP80297 61 aa4.21□□□□□ -1.73
LIN54-203ENST00000446851 KMT2DO14686 5537 aa4.21□□□□□ -1.73
LIN54-203ENST00000446851 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.2□□□□□ -1.74
LIN54-203ENST00000446851 TNP1P09430 55 aa4.18□□□□□ -1.74
LIN54-203ENST00000446851 CDC42SE1Q9NRR8 79 aa4.17□□□□□ -1.74
LIN54-203ENST00000446851 KRTAP8-1Q8IUC2 63 aa4.16□□□□□ -1.74
LIN54-203ENST00000446851 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.74
LIN54-203ENST00000446851 KRTAP4-8A0A0G2JLE6 195 aa4.14□□□□□ -1.75
LIN54-203ENST00000446851 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
LIN54-203ENST00000446851 KRTAP4-8Q9BYQ9 185 aa4.14□□□□□ -1.75
LIN54-203ENST00000446851 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
LIN54-203ENST00000446851 KRTAP10-12P60413 245 aa4.09□□□□□ -1.76
LIN54-203ENST00000446851 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
LIN54-203ENST00000446851 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
LIN54-203ENST00000446851 ROMO1P60602 79 aa4.03□□□□□ -1.76
LIN54-203ENST00000446851 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
LIN54-203ENST00000446851 LCE3AQ5TA76 89 aa3.96□□□□□ -1.77
LIN54-203ENST00000446851 SPRR2EP22531 72 aa3.95□□□□□ -1.78
LIN54-203ENST00000446851 SPRR2BP35325 72 aa3.95□□□□□ -1.78
LIN54-203ENST00000446851 SPRR2AP35326 72 aa3.95□□□□□ -1.78
LIN54-203ENST00000446851 DSTQ03001 7570 aaKnown RBP3.94□□□□□ -1.78
LIN54-203ENST00000446851 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
LIN54-203ENST00000446851 MDN1Q9NU22 5596 aa3.93□□□□□ -1.78
LIN54-203ENST00000446851 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
LIN54-203ENST00000446851 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
LIN54-203ENST00000446851 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
LIN54-203ENST00000446851 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
LIN54-203ENST00000446851 PRO0628Q9UI54 55 aa3.81□□□□□ -1.8
LIN54-203ENST00000446851 SPRR2DP22532 72 aa3.8□□□□□ -1.8
LIN54-203ENST00000446851 NEBP20929 6669 aa3.74□□□□□ -1.81
LIN54-203ENST00000446851 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms