RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 LINC01554Q52M75 96 aa9.38□□□□□ -0.91
LRCH1-204ENST00000443945 MRPL34Q9BQ48 92 aaKnown RBP9.37□□□□□ -0.91
LRCH1-204ENST00000443945 COX6B2Q6YFQ2 88 aa9.36□□□□□ -0.91
LRCH1-204ENST00000443945 MT1HP80294 61 aa9.36□□□□□ -0.91
LRCH1-204ENST00000443945 TP53AIP1Q9HCN2 124 aa9.36□□□□□ -0.91
LRCH1-204ENST00000443945 C7orf65Q6ZTY9 151 aa9.31□□□□□ -0.92
LRCH1-204ENST00000443945 FLGP20930 4061 aaPredicted RBP9.28□□□□□ -0.92
LRCH1-204ENST00000443945 Q5VV11 94 aa9.28□□□□□ -0.92
LRCH1-204ENST00000443945 COA5Q86WW8 74 aa9.24□□□□□ -0.93
LRCH1-204ENST00000443945 SPINK7P58062 85 aa9.22□□□□□ -0.93
LRCH1-204ENST00000443945 PRR15LQ9BU68 103 aa9.22□□□□□ -0.93
LRCH1-204ENST00000443945 CHKB-CPT1BH3BT56 60 aa9.22□□□□□ -0.93
LRCH1-204ENST00000443945 M0R2T5 61 aa9.21□□□□□ -0.93
LRCH1-204ENST00000443945 A8MU10 97 aa9.19□□□□□ -0.94
LRCH1-204ENST00000443945 HRES1P13985 223 aa9.19□□□□□ -0.94
LRCH1-204ENST00000443945 PRAC1Q96KF2 57 aa9.19□□□□□ -0.94
LRCH1-204ENST00000443945 KRTAP3-3Q9BYR6 98 aa9.17□□□□□ -0.94
LRCH1-204ENST00000443945 KRTAP3-2Q9BYR7 98 aa9.17□□□□□ -0.94
LRCH1-204ENST00000443945 Q5W150 140 aa9.16□□□□□ -0.94
LRCH1-204ENST00000443945 KRTAP9-2Q9BYQ4 174 aa9.15□□□□□ -0.94
LRCH1-204ENST00000443945 A6NN06 94 aa9.14□□□□□ -0.95
LRCH1-204ENST00000443945 KRTAP10-6P60371 365 aaPredicted RBP9.12□□□□□ -0.95
LRCH1-204ENST00000443945 LOC101927531A0A1B0GV80 90 aa9.12□□□□□ -0.95
LRCH1-204ENST00000443945 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
LRCH1-204ENST00000443945 IGKV2D-30A0A075B6S6 120 aa9.1□□□□□ -0.95
LRCH1-204ENST00000443945 IGKV2-30P06310 120 aa9.1□□□□□ -0.95
LRCH1-204ENST00000443945 A6NED7 52 aa9.09□□□□□ -0.95
LRCH1-204ENST00000443945 LINC01558Q9Y6Z2 57 aa9.06□□□□□ -0.96
LRCH1-204ENST00000443945 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
LRCH1-204ENST00000443945 KRTAP23-1A1A580 65 aa9.03□□□□□ -0.96
LRCH1-204ENST00000443945 ADM2Q7Z4H4 148 aa9.01□□□□□ -0.97
LRCH1-204ENST00000443945 CDC42SE1Q9NRR8 79 aa8.99□□□□□ -0.97
LRCH1-204ENST00000443945 LCE2DQ5TA82 110 aaPredicted RBP8.93□□□□□ -0.98
LRCH1-204ENST00000443945 ACYP2P14621 99 aa8.9□□□□□ -0.99
LRCH1-204ENST00000443945 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
LRCH1-204ENST00000443945 KRTAP9-8Q9BYQ0 159 aa8.89□□□□□ -0.99
LRCH1-204ENST00000443945 DMAC1Q96GE9 116 aa8.85□□□□□ -0.99
LRCH1-204ENST00000443945 H1FX-AS1Q4G0G2 97 aa8.83□□□□□ -1
LRCH1-204ENST00000443945 LUZP6Q538Z0 58 aa8.81□□□□□ -1
LRCH1-204ENST00000443945 MT2AP02795 61 aa8.79□□□□□ -1
LRCH1-204ENST00000443945 KRTAP9-6A0A140TA67 174 aa8.74□□□□□ -1.01
LRCH1-204ENST00000443945 MT1FP04733 61 aa8.74□□□□□ -1.01
LRCH1-204ENST00000443945 KRTAP3-1Q9BYR8 98 aa8.72□□□□□ -1.01
LRCH1-204ENST00000443945 A0A1B0GU69 56 aa8.71□□□□□ -1.01
LRCH1-204ENST00000443945 KRTAP10-10P60014 251 aa8.68□□□□□ -1.02
LRCH1-204ENST00000443945 ROMO1P60602 79 aa8.67□□□□□ -1.02
LRCH1-204ENST00000443945 CRCT1Q9UGL9 99 aa8.66□□□□□ -1.02
LRCH1-204ENST00000443945 USH2AO75445 5202 aa8.62□□□□□ -1.03
LRCH1-204ENST00000443945 S4R3F8 94 aa8.62□□□□□ -1.03
LRCH1-204ENST00000443945 SPATA8Q6RVD6 105 aa8.61□□□□□ -1.03
LRCH1-204ENST00000443945 K7ERS5 55 aa8.59□□□□□ -1.03
LRCH1-204ENST00000443945 KRTAP9-3Q9BYQ3 159 aa8.58□□□□□ -1.04
LRCH1-204ENST00000443945 UQCR11O14957 56 aa8.57□□□□□ -1.04
LRCH1-204ENST00000443945 MIR22HGQ0VDD5 57 aa8.57□□□□□ -1.04
LRCH1-204ENST00000443945 LCE2BO14633 110 aa8.53□□□□□ -1.04
LRCH1-204ENST00000443945 CSAG1Q6PB30 78 aa8.53□□□□□ -1.04
LRCH1-204ENST00000443945 SSPOA2VEC9 5147 aa8.51□□□□□ -1.05
LRCH1-204ENST00000443945 CAMK2N1Q7Z7J9 78 aa8.48□□□□□ -1.05
LRCH1-204ENST00000443945 P0C880 135 aa8.39□□□□□ -1.07
LRCH1-204ENST00000443945 KRTAP19-1Q8IUB9 90 aa8.28□□□□□ -1.08
LRCH1-204ENST00000443945 FCGBPQ9Y6R7 5405 aaPredicted RBP8.27□□□□□ -1.09
LRCH1-204ENST00000443945 H0YAA0 97 aa8.23□□□□□ -1.09
LRCH1-204ENST00000443945 A0A1B0GU33 70 aa8.19□□□□□ -1.1
LRCH1-204ENST00000443945 NDUFAF8A1L188 74 aa8.14□□□□□ -1.11
LRCH1-204ENST00000443945 KRTAP19-6Q3LI70 58 aa8.13□□□□□ -1.11
LRCH1-204ENST00000443945 SPRR2GQ9BYE4 73 aa8.12□□□□□ -1.11
LRCH1-204ENST00000443945 CRIPTQ9P021 101 aa8.08□□□□□ -1.12
LRCH1-204ENST00000443945 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.06□□□□□ -1.12
LRCH1-204ENST00000443945 MT1BP07438 61 aa8.06□□□□□ -1.12
LRCH1-204ENST00000443945 KRTAP19-8Q3LI54 63 aa8.03□□□□□ -1.12
LRCH1-204ENST00000443945 KRTAP25-1Q3LHN0 102 aa8.01□□□□□ -1.13
LRCH1-204ENST00000443945 R4GN34 69 aa7.96□□□□□ -1.13
LRCH1-204ENST00000443945 MACF1Q9UPN3 7388 aaKnown RBP7.92□□□□□ -1.14
LRCH1-204ENST00000443945 M0QZ58 72 aa7.9□□□□□ -1.15
LRCH1-204ENST00000443945 KRTAP9-7A8MTY7 169 aa7.89□□□□□ -1.15
LRCH1-204ENST00000443945 SYNE2Q8WXH0 6885 aaKnown RBP7.83□□□□□ -1.16
LRCH1-204ENST00000443945 KRTAP13-4Q3LI77 160 aa7.81□□□□□ -1.16
LRCH1-204ENST00000443945 A0A0D9SG42 100 aa7.8□□□□□ -1.16
LRCH1-204ENST00000443945 KRTAP10-5P60370 271 aa7.8□□□□□ -1.16
LRCH1-204ENST00000443945 PLAC4Q8WY50 150 aa7.75□□□□□ -1.17
LRCH1-204ENST00000443945 KRTAP15-1Q3LI76 137 aa7.68□□□□□ -1.18
LRCH1-204ENST00000443945 MT1XP80297 61 aa7.62□□□□□ -1.19
LRCH1-204ENST00000443945 PRO2289Q9P1D8 64 aa7.58□□□□□ -1.2
LRCH1-204ENST00000443945 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
LRCH1-204ENST00000443945 KRTAP6-3Q3LI67 103 aa7.56□□□□□ -1.2
LRCH1-204ENST00000443945 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
LRCH1-204ENST00000443945 SPINT4Q6UDR6 99 aa7.53□□□□□ -1.2
LRCH1-204ENST00000443945 KMT2DO14686 5537 aa7.52□□□□□ -1.21
LRCH1-204ENST00000443945 KRTAP12-1P59990 96 aa7.51□□□□□ -1.21
LRCH1-204ENST00000443945 MUC12Q9UKN1 5478 aa7.44□□□□□ -1.22
LRCH1-204ENST00000443945 KRTAP5-9P26371 169 aa7.32□□□□□ -1.24
LRCH1-204ENST00000443945 KRTAP10-7P60409 375 aaPredicted RBP7.31□□□□□ -1.24
LRCH1-204ENST00000443945 MDN1Q9NU22 5596 aa7.3□□□□□ -1.24
LRCH1-204ENST00000443945 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
LRCH1-204ENST00000443945 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
LRCH1-204ENST00000443945 NEBP20929 6669 aa7.24□□□□□ -1.25
LRCH1-204ENST00000443945 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
LRCH1-204ENST00000443945 SPRR2FQ96RM1 72 aa7.22□□□□□ -1.25
LRCH1-204ENST00000443945 KRTAP10-12P60413 245 aa7.2□□□□□ -1.26
LRCH1-204ENST00000443945 SPRR2EP22531 72 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms