RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 LINC00643Q86TS7 51 aa7.34□□□□□ -1.23
CTDSP1-204ENST00000443891 UQCRQO14949 82 aa7.33□□□□□ -1.24
CTDSP1-204ENST00000443891 ATOX1O00244 68 aa7.32□□□□□ -1.24
CTDSP1-204ENST00000443891 SCGB1A1P11684 91 aa7.32□□□□□ -1.24
CTDSP1-204ENST00000443891 CYP4F30PQ9H0H9 118 aa7.31□□□□□ -1.24
CTDSP1-204ENST00000443891 KLKP1Q107X0 134 aa7.3□□□□□ -1.24
CTDSP1-204ENST00000443891 H0Y9P7 68 aa7.28□□□□□ -1.24
CTDSP1-204ENST00000443891 CRIPTQ9P021 101 aa7.27□□□□□ -1.25
CTDSP1-204ENST00000443891 KRTAP10-5P60370 271 aa7.26□□□□□ -1.25
CTDSP1-204ENST00000443891 A0A087WVE0 104 aa7.24□□□□□ -1.25
CTDSP1-204ENST00000443891 MP68P56378 58 aa7.22□□□□□ -1.25
CTDSP1-204ENST00000443891 KRTAP3-3Q9BYR6 98 aa7.22□□□□□ -1.25
CTDSP1-204ENST00000443891 IMUPQ9GZP8 106 aa7.22□□□□□ -1.25
CTDSP1-204ENST00000443891 MT-ATP8P03928 68 aa7.2□□□□□ -1.26
CTDSP1-204ENST00000443891 PCP4P48539 62 aa7.2□□□□□ -1.26
CTDSP1-204ENST00000443891 NEBP20929 6669 aa7.18□□□□□ -1.26
CTDSP1-204ENST00000443891 LINC00208Q96KT6 92 aa7.18□□□□□ -1.26
CTDSP1-204ENST00000443891 KRTAP5-9P26371 169 aa7.15□□□□□ -1.26
CTDSP1-204ENST00000443891 NDUFC1O43677 76 aa7.14□□□□□ -1.27
CTDSP1-204ENST00000443891 A8MUN3 132 aa7.12□□□□□ -1.27
CTDSP1-204ENST00000443891 H0YAA0 97 aa7.12□□□□□ -1.27
CTDSP1-204ENST00000443891 MUC12Q9UKN1 5478 aa7.1□□□□□ -1.27
CTDSP1-204ENST00000443891 OCR1Q9BZK8 76 aa7.08□□□□□ -1.28
CTDSP1-204ENST00000443891 H3BPC8 53 aa7.07□□□□□ -1.28
CTDSP1-204ENST00000443891 ANAPC13Q9BS18 74 aa7.07□□□□□ -1.28
CTDSP1-204ENST00000443891 KRTAP20-1Q3LI63 56 aa7.06□□□□□ -1.28
CTDSP1-204ENST00000443891 PRO2289Q9P1D8 64 aa6.98□□□□□ -1.29
CTDSP1-204ENST00000443891 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.3
CTDSP1-204ENST00000443891 KMT2DO14686 5537 aa6.96□□□□□ -1.3
CTDSP1-204ENST00000443891 ADM2Q7Z4H4 148 aa6.94□□□□□ -1.3
CTDSP1-204ENST00000443891 C20orf197Q8N268 126 aa6.89□□□□□ -1.31
CTDSP1-204ENST00000443891 SERP2Q8N6R1 65 aa6.89□□□□□ -1.31
CTDSP1-204ENST00000443891 PLAC4Q8WY50 150 aa6.89□□□□□ -1.31
CTDSP1-204ENST00000443891 MDN1Q9NU22 5596 aa6.89□□□□□ -1.31
CTDSP1-204ENST00000443891 COX7CP15954 63 aa6.87□□□□□ -1.31
CTDSP1-204ENST00000443891 DMAC1Q96GE9 116 aa6.87□□□□□ -1.31
CTDSP1-204ENST00000443891 TRAV7A0A075B6U4 112 aa6.86□□□□□ -1.31
CTDSP1-204ENST00000443891 KRTAP2-3P0C7H8 128 aa6.86□□□□□ -1.31
CTDSP1-204ENST00000443891 KRTAP2-4Q9BYR9 128 aa6.86□□□□□ -1.31
CTDSP1-204ENST00000443891 MT1XP80297 61 aa6.85□□□□□ -1.31
CTDSP1-204ENST00000443891 SPRR2FQ96RM1 72 aa6.83□□□□□ -1.32
CTDSP1-204ENST00000443891 R4GN34 69 aa6.83□□□□□ -1.32
CTDSP1-204ENST00000443891 ACYP2P14621 99 aa6.82□□□□□ -1.32
CTDSP1-204ENST00000443891 SPTSSBQ8NFR3 76 aa6.82□□□□□ -1.32
CTDSP1-204ENST00000443891 KRTAP12-2P59991 146 aa6.8□□□□□ -1.32
CTDSP1-204ENST00000443891 CCDC179H3BU77 68 aa6.79□□□□□ -1.32
CTDSP1-204ENST00000443891 CHKB-CPT1BH3BT56 60 aa6.78□□□□□ -1.32
CTDSP1-204ENST00000443891 SPRR2EP22531 72 aa6.78□□□□□ -1.32
CTDSP1-204ENST00000443891 SPRR2BP35325 72 aa6.78□□□□□ -1.32
CTDSP1-204ENST00000443891 SPRR2AP35326 72 aa6.78□□□□□ -1.32
CTDSP1-204ENST00000443891 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
CTDSP1-204ENST00000443891 M0QZ58 72 aa6.73□□□□□ -1.33
CTDSP1-204ENST00000443891 P0C880 135 aa6.73□□□□□ -1.33
CTDSP1-204ENST00000443891 SNURFQ9Y675 71 aa6.71□□□□□ -1.34
CTDSP1-204ENST00000443891 TMEM258P61165 79 aa6.7□□□□□ -1.34
CTDSP1-204ENST00000443891 LCE1AQ5T7P2 110 aa6.68□□□□□ -1.34
CTDSP1-204ENST00000443891 LINC01554Q52M75 96 aa6.66□□□□□ -1.34
CTDSP1-204ENST00000443891 ATP5EP56381 51 aaPredicted RBP6.65□□□□□ -1.34
CTDSP1-204ENST00000443891 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.34
CTDSP1-204ENST00000443891 KRTAP2-2Q9BYT5 123 aa6.64□□□□□ -1.35
CTDSP1-204ENST00000443891 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
CTDSP1-204ENST00000443891 SPANXA2-OT1Q8N9U9 137 aa6.61□□□□□ -1.35
CTDSP1-204ENST00000443891 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
CTDSP1-204ENST00000443891 H7BZZ5 65 aa6.57□□□□□ -1.36
CTDSP1-204ENST00000443891 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
CTDSP1-204ENST00000443891 SPRR2DP22532 72 aa6.56□□□□□ -1.36
CTDSP1-204ENST00000443891 KRTAP10-12P60413 245 aa6.54□□□□□ -1.36
CTDSP1-204ENST00000443891 CYSTM1Q9H1C7 97 aa6.53□□□□□ -1.36
CTDSP1-204ENST00000443891 RPS28P62857 69 aaKnown RBP6.51□□□□□ -1.37
CTDSP1-204ENST00000443891 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
CTDSP1-204ENST00000443891 SEC61GP60059 68 aa6.47□□□□□ -1.37
CTDSP1-204ENST00000443891 SERP1Q9Y6X1 66 aa6.47□□□□□ -1.37
CTDSP1-204ENST00000443891 COA5Q86WW8 74 aa6.43□□□□□ -1.38
CTDSP1-204ENST00000443891 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
CTDSP1-204ENST00000443891 SMIM26A0A096LP01 95 aa6.33□□□□□ -1.4
CTDSP1-204ENST00000443891 CAMK2N1Q7Z7J9 78 aa6.32□□□□□ -1.4
CTDSP1-204ENST00000443891 V9GYY9 64 aa6.24□□□□□ -1.41
CTDSP1-204ENST00000443891 A0A0D9SG42 100 aa6.22□□□□□ -1.41
CTDSP1-204ENST00000443891 A0A1B0GU33 70 aa6.22□□□□□ -1.41
CTDSP1-204ENST00000443891 KRTAP13-4Q3LI77 160 aa6.22□□□□□ -1.41
CTDSP1-204ENST00000443891 A0A1B0GU69 56 aa6.19□□□□□ -1.42
CTDSP1-204ENST00000443891 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
CTDSP1-204ENST00000443891 SPINT4Q6UDR6 99 aa6.16□□□□□ -1.42
CTDSP1-204ENST00000443891 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.42
CTDSP1-204ENST00000443891 Q1T7F1 81 aa6.14□□□□□ -1.43
CTDSP1-204ENST00000443891 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
CTDSP1-204ENST00000443891 KRTAP19-3Q7Z4W3 81 aa6.1□□□□□ -1.43
CTDSP1-204ENST00000443891 PRR15LQ9BU68 103 aa6.1□□□□□ -1.43
CTDSP1-204ENST00000443891 MT1EP04732 61 aa6.09□□□□□ -1.43
CTDSP1-204ENST00000443891 DSTQ03001 7570 aaKnown RBP6.01□□□□□ -1.45
CTDSP1-204ENST00000443891 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
CTDSP1-204ENST00000443891 MT1GP13640 62 aa5.98□□□□□ -1.45
CTDSP1-204ENST00000443891 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
CTDSP1-204ENST00000443891 PSPHP1O15172 72 aa5.96□□□□□ -1.46
CTDSP1-204ENST00000443891 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
CTDSP1-204ENST00000443891 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
CTDSP1-204ENST00000443891 A8MU10 97 aa5.92□□□□□ -1.46
CTDSP1-204ENST00000443891 GPR98Q8WXG9 6306 aa5.91□□□□□ -1.46
CTDSP1-204ENST00000443891 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
CTDSP1-204ENST00000443891 BRK1Q8WUW1 75 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 190.1 ms