RNA–Protein interactions for RNA: ENST00000442738.6

POLR2F-205, Transcript of RNA polymerase II subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2F, Length 2,106 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-205ENST00000442738 H1FX-AS1Q4G0G2 97 aa10.79□□□□□ -0.68
POLR2F-205ENST00000442738 H0YAA0 97 aa10.79□□□□□ -0.68
POLR2F-205ENST00000442738 KIAA1109Q2LD37 5005 aa10.78□□□□□ -0.68
POLR2F-205ENST00000442738 KRTAP3-3Q9BYR6 98 aa10.71□□□□□ -0.69
POLR2F-205ENST00000442738 TPRXLQ17RH7 258 aa10.7□□□□□ -0.7
POLR2F-205ENST00000442738 RBM12B-AS1Q9P1G2 102 aa10.7□□□□□ -0.7
POLR2F-205ENST00000442738 MYCBP2O75592 4640 aa10.7□□□□□ -0.7
POLR2F-205ENST00000442738 S4R3F8 94 aa10.66□□□□□ -0.7
POLR2F-205ENST00000442738 KRTAP10-6P60371 365 aaPredicted RBP10.57□□□□□ -0.72
POLR2F-205ENST00000442738 ADM2Q7Z4H4 148 aa10.55□□□□□ -0.72
POLR2F-205ENST00000442738 PRAC1Q96KF2 57 aa10.55□□□□□ -0.72
POLR2F-205ENST00000442738 EPPK1P58107 5090 aaKnown RBP10.54□□□□□ -0.72
POLR2F-205ENST00000442738 H3BS24 57 aa10.53□□□□□ -0.72
POLR2F-205ENST00000442738 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
POLR2F-205ENST00000442738 K7ERS5 55 aa10.45□□□□□ -0.74
POLR2F-205ENST00000442738 KRTAP4-5Q9BYR2 181 aa10.43□□□□□ -0.74
POLR2F-205ENST00000442738 LRP2P98164 4655 aa10.4□□□□□ -0.74
POLR2F-205ENST00000442738 KRTAP13-4Q3LI77 160 aa10.36□□□□□ -0.75
POLR2F-205ENST00000442738 P0C880 135 aa10.33□□□□□ -0.76
POLR2F-205ENST00000442738 CSAG1Q6PB30 78 aa10.33□□□□□ -0.76
POLR2F-205ENST00000442738 LPAP08519 4548 aa10.32□□□□□ -0.76
POLR2F-205ENST00000442738 SEC61BP60468 96 aaKnown RBP10.29□□□□□ -0.76
POLR2F-205ENST00000442738 ABCA13Q86UQ4 5058 aa10.27□□□□□ -0.76
POLR2F-205ENST00000442738 LINC01554Q52M75 96 aa10.24□□□□□ -0.77
POLR2F-205ENST00000442738 A0A0D9SG42 100 aa10.21□□□□□ -0.78
POLR2F-205ENST00000442738 J3QL48 77 aa10.19□□□□□ -0.78
POLR2F-205ENST00000442738 KRTAP25-1Q3LHN0 102 aa10.16□□□□□ -0.78
POLR2F-205ENST00000442738 ROMO1P60602 79 aa10.15□□□□□ -0.78
POLR2F-205ENST00000442738 M0QZ58 72 aa10.15□□□□□ -0.79
POLR2F-205ENST00000442738 MUC17Q685J3 4493 aa10.05□□□□□ -0.8
POLR2F-205ENST00000442738 HERC2O95714 4834 aa10.03□□□□□ -0.8
POLR2F-205ENST00000442738 KRTAP4-1Q9BYQ7 146 aa10.03□□□□□ -0.8
POLR2F-205ENST00000442738 KRTAP12-2P59991 146 aa10.02□□□□□ -0.81
POLR2F-205ENST00000442738 KRTAP12-1P59990 96 aa10.01□□□□□ -0.81
POLR2F-205ENST00000442738 KRTAP19-2Q3LHN2 52 aa9.92□□□□□ -0.82
POLR2F-205ENST00000442738 SPINT4Q6UDR6 99 aa9.92□□□□□ -0.82
POLR2F-205ENST00000442738 BIRC6Q9NR09 4857 aa9.9□□□□□ -0.82
POLR2F-205ENST00000442738 CRIPTQ9P021 101 aa9.88□□□□□ -0.83
POLR2F-205ENST00000442738 R4GN34 69 aa9.86□□□□□ -0.83
POLR2F-205ENST00000442738 LORP23490 312 aaPredicted RBP9.7□□□□□ -0.86
POLR2F-205ENST00000442738 A0A0A0MQY5 61 aa9.69□□□□□ -0.86
POLR2F-205ENST00000442738 C10orf95Q9H7T3 257 aa9.64□□□□□ -0.87
POLR2F-205ENST00000442738 FLGP20930 4061 aaPredicted RBP9.62□□□□□ -0.87
POLR2F-205ENST00000442738 HMCN2Q8NDA2 5059 aa9.51□□□□□ -0.89
POLR2F-205ENST00000442738 HERC1Q15751 4861 aa9.5□□□□□ -0.89
POLR2F-205ENST00000442738 MUC2Q02817 5179 aa9.46□□□□□ -0.89
POLR2F-205ENST00000442738 PCLOQ9Y6V0 5065 aa9.46□□□□□ -0.9
POLR2F-205ENST00000442738 LCE2CQ5TA81 110 aa9.38□□□□□ -0.91
POLR2F-205ENST00000442738 CAMK2N1Q7Z7J9 78 aa9.31□□□□□ -0.92
POLR2F-205ENST00000442738 KRTAP15-1Q3LI76 137 aa9.2□□□□□ -0.94
POLR2F-205ENST00000442738 PP632Q6XCG6 107 aa9.17□□□□□ -0.94
POLR2F-205ENST00000442738 SPRR2GQ9BYE4 73 aa9.15□□□□□ -0.94
POLR2F-205ENST00000442738 MT1HP80294 61 aa9.13□□□□□ -0.95
POLR2F-205ENST00000442738 M0R2T5 61 aa9.08□□□□□ -0.96
POLR2F-205ENST00000442738 FAT4Q6V0I7 4981 aa9.04□□□□□ -0.96
POLR2F-205ENST00000442738 RNF213Q63HN8 5207 aa9.04□□□□□ -0.96
POLR2F-205ENST00000442738 KRTAP19-1Q8IUB9 90 aa9.04□□□□□ -0.96
POLR2F-205ENST00000442738 TNP1P09430 55 aa8.99□□□□□ -0.97
POLR2F-205ENST00000442738 KRTAP23-1A1A580 65 aa8.99□□□□□ -0.97
POLR2F-205ENST00000442738 PLAC4Q8WY50 150 aa8.97□□□□□ -0.97
POLR2F-205ENST00000442738 UBR4Q5T4S7 5183 aa8.95□□□□□ -0.98
POLR2F-205ENST00000442738 MT2AP02795 61 aa8.94□□□□□ -0.98
POLR2F-205ENST00000442738 MT1FP04733 61 aa8.91□□□□□ -0.98
POLR2F-205ENST00000442738 KRTAP9-8Q9BYQ0 159 aa8.9□□□□□ -0.98
POLR2F-205ENST00000442738 KRTAP10-10P60014 251 aa8.89□□□□□ -0.99
POLR2F-205ENST00000442738 NDUFAF8A1L188 74 aa8.78□□□□□ -1
POLR2F-205ENST00000442738 KRTAP19-8Q3LI54 63 aa8.78□□□□□ -1
POLR2F-205ENST00000442738 MT1BP07438 61 aa8.6□□□□□ -1.03
POLR2F-205ENST00000442738 KRTAP9-3Q9BYQ3 159 aa8.56□□□□□ -1.04
POLR2F-205ENST00000442738 KRTAP10-5P60370 271 aa8.5□□□□□ -1.05
POLR2F-205ENST00000442738 LUZP6Q538Z0 58 aa8.5□□□□□ -1.05
POLR2F-205ENST00000442738 MT1XP80297 61 aa8.5□□□□□ -1.05
POLR2F-205ENST00000442738 LCE3AQ5TA76 89 aa8.48□□□□□ -1.05
POLR2F-205ENST00000442738 SPRR5A0A1B0GTR4 108 aa8.44□□□□□ -1.06
POLR2F-205ENST00000442738 KRTAP8-1Q8IUC2 63 aa8.38□□□□□ -1.07
POLR2F-205ENST00000442738 PRO2289Q9P1D8 64 aa8.3□□□□□ -1.08
POLR2F-205ENST00000442738 KRTAP10-12P60413 245 aa8.27□□□□□ -1.08
POLR2F-205ENST00000442738 LCE2AQ5TA79 106 aaPredicted RBP8.26□□□□□ -1.09
POLR2F-205ENST00000442738 LCE2BO14633 110 aa8.19□□□□□ -1.1
POLR2F-205ENST00000442738 KRTAP10-7P60409 375 aaPredicted RBP8.18□□□□□ -1.1
POLR2F-205ENST00000442738 KRTAP12-3P60328 96 aa8.13□□□□□ -1.11
POLR2F-205ENST00000442738 KRTAP19-5Q3LI72 72 aa7.82□□□□□ -1.16
POLR2F-205ENST00000442738 USH2AO75445 5202 aa7.77□□□□□ -1.16
POLR2F-205ENST00000442738 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
POLR2F-205ENST00000442738 KRTAP4-8Q9BYQ9 185 aa7.66□□□□□ -1.18
POLR2F-205ENST00000442738 LCE3CQ5T5A8 94 aa7.66□□□□□ -1.18
POLR2F-205ENST00000442738 KRTAP19-7Q3SYF9 63 aa7.57□□□□□ -1.2
POLR2F-205ENST00000442738 KRTAP19-4Q3LI73 84 aa7.55□□□□□ -1.2
POLR2F-205ENST00000442738 KMT2DO14686 5537 aa7.54□□□□□ -1.2
POLR2F-205ENST00000442738 KRTAP19-6Q3LI70 58 aa7.52□□□□□ -1.21
POLR2F-205ENST00000442738 SSPOA2VEC9 5147 aa7.52□□□□□ -1.21
POLR2F-205ENST00000442738 MT1EP04732 61 aa7.39□□□□□ -1.23
POLR2F-205ENST00000442738 MT1LQ93083 61 aa7.35□□□□□ -1.23
POLR2F-205ENST00000442738 KRTAP9-6A8MVA2 160 aa7.28□□□□□ -1.24
POLR2F-205ENST00000442738 INE1O15225 51 aa7.26□□□□□ -1.25
POLR2F-205ENST00000442738 LCE2DQ5TA82 110 aaPredicted RBP7.22□□□□□ -1.25
POLR2F-205ENST00000442738 KRTAP4-7Q9BYR0 210 aa7.21□□□□□ -1.26
POLR2F-205ENST00000442738 KRTAP2-3P0C7H8 128 aa7.06□□□□□ -1.28
POLR2F-205ENST00000442738 KRTAP2-4Q9BYR9 128 aa7.06□□□□□ -1.28
POLR2F-205ENST00000442738 KRTAP2-1Q9BYU5 128 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms