RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 CDC42SE1Q9NRR8 79 aa6.71□□□□□ -1.34
CPSF4-206ENST00000441580 SVIPQ8NHG7 77 aa6.7□□□□□ -1.34
CPSF4-206ENST00000441580 S4R3F8 94 aa6.7□□□□□ -1.34
CPSF4-206ENST00000441580 H1FX-AS1Q4G0G2 97 aa6.67□□□□□ -1.34
CPSF4-206ENST00000441580 UQCR11O14957 56 aa6.65□□□□□ -1.34
CPSF4-206ENST00000441580 LCA10Q71F78 164 aa6.63□□□□□ -1.35
CPSF4-206ENST00000441580 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
CPSF4-206ENST00000441580 MIR22HGQ0VDD5 57 aa6.58□□□□□ -1.36
CPSF4-206ENST00000441580 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
CPSF4-206ENST00000441580 A8MU10 97 aa6.55□□□□□ -1.36
CPSF4-206ENST00000441580 LRP2P98164 4655 aa6.54□□□□□ -1.36
CPSF4-206ENST00000441580 MUC17Q685J3 4493 aa6.52□□□□□ -1.37
CPSF4-206ENST00000441580 A0A1B0GU33 70 aa6.52□□□□□ -1.37
CPSF4-206ENST00000441580 LPAP08519 4548 aa6.51□□□□□ -1.37
CPSF4-206ENST00000441580 CSAG1Q6PB30 78 aa6.5□□□□□ -1.37
CPSF4-206ENST00000441580 PCLOQ9Y6V0 5065 aa6.5□□□□□ -1.37
CPSF4-206ENST00000441580 KRTAP4-1Q9BYQ7 146 aa6.47□□□□□ -1.37
CPSF4-206ENST00000441580 PMAIP1Q13794 54 aa6.45□□□□□ -1.38
CPSF4-206ENST00000441580 H0YAA0 97 aa6.44□□□□□ -1.38
CPSF4-206ENST00000441580 KRTAP10-6P60371 365 aaPredicted RBP6.43□□□□□ -1.38
CPSF4-206ENST00000441580 A6NN06 94 aa6.41□□□□□ -1.38
CPSF4-206ENST00000441580 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
CPSF4-206ENST00000441580 ADM2Q7Z4H4 148 aa6.38□□□□□ -1.39
CPSF4-206ENST00000441580 HERC1Q15751 4861 aa6.38□□□□□ -1.39
CPSF4-206ENST00000441580 HMCN2Q8NDA2 5059 aa6.37□□□□□ -1.39
CPSF4-206ENST00000441580 KRTAP19-2Q3LHN2 52 aa6.35□□□□□ -1.39
CPSF4-206ENST00000441580 P0C880 135 aa6.33□□□□□ -1.4
CPSF4-206ENST00000441580 K7ERS5 55 aa6.32□□□□□ -1.4
CPSF4-206ENST00000441580 KTN1-AS1Q86SY8 53 aa6.31□□□□□ -1.4
CPSF4-206ENST00000441580 M0QZ58 72 aa6.28□□□□□ -1.4
CPSF4-206ENST00000441580 KRTAP13-4Q3LI77 160 aa6.27□□□□□ -1.41
CPSF4-206ENST00000441580 A0A0D9SG42 100 aa6.19□□□□□ -1.42
CPSF4-206ENST00000441580 R4GN34 69 aa6.17□□□□□ -1.42
CPSF4-206ENST00000441580 FLGP20930 4061 aaPredicted RBP6.14□□□□□ -1.43
CPSF4-206ENST00000441580 LCE2CQ5TA81 110 aa6.12□□□□□ -1.43
CPSF4-206ENST00000441580 CRIPTQ9P021 101 aa6.1□□□□□ -1.43
CPSF4-206ENST00000441580 KRTAP12-1P59990 96 aa6.07□□□□□ -1.44
CPSF4-206ENST00000441580 KRTAP12-2P59991 146 aa6.05□□□□□ -1.44
CPSF4-206ENST00000441580 RNF213Q63HN8 5207 aa6.05□□□□□ -1.44
CPSF4-206ENST00000441580 SPINT4Q6UDR6 99 aa6.04□□□□□ -1.44
CPSF4-206ENST00000441580 ROMO1P60602 79 aa6.03□□□□□ -1.44
CPSF4-206ENST00000441580 MT1HP80294 61 aa6.03□□□□□ -1.44
CPSF4-206ENST00000441580 M0R2T5 61 aa6.01□□□□□ -1.45
CPSF4-206ENST00000441580 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
CPSF4-206ENST00000441580 LINC01554Q52M75 96 aa6.01□□□□□ -1.45
CPSF4-206ENST00000441580 PRAC1Q96KF2 57 aa6□□□□□ -1.45
CPSF4-206ENST00000441580 UBR4Q5T4S7 5183 aa6□□□□□ -1.45
CPSF4-206ENST00000441580 MUC2Q02817 5179 aa5.98□□□□□ -1.45
CPSF4-206ENST00000441580 KRTAP25-1Q3LHN0 102 aa5.87□□□□□ -1.47
CPSF4-206ENST00000441580 SPRR2GQ9BYE4 73 aa5.85□□□□□ -1.47
CPSF4-206ENST00000441580 MT2AP02795 61 aa5.84□□□□□ -1.47
CPSF4-206ENST00000441580 FAT4Q6V0I7 4981 aa5.82□□□□□ -1.48
CPSF4-206ENST00000441580 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
CPSF4-206ENST00000441580 MT1FP04733 61 aa5.8□□□□□ -1.48
CPSF4-206ENST00000441580 KRTAP9-8Q9BYQ0 159 aa5.8□□□□□ -1.48
CPSF4-206ENST00000441580 KRTAP10-10P60014 251 aa5.79□□□□□ -1.48
CPSF4-206ENST00000441580 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
CPSF4-206ENST00000441580 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
CPSF4-206ENST00000441580 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
CPSF4-206ENST00000441580 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
CPSF4-206ENST00000441580 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
CPSF4-206ENST00000441580 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.51
CPSF4-206ENST00000441580 PP632Q6XCG6 107 aa5.58□□□□□ -1.52
CPSF4-206ENST00000441580 TNP1P09430 55 aa5.57□□□□□ -1.52
CPSF4-206ENST00000441580 MT1BP07438 61 aa5.54□□□□□ -1.52
CPSF4-206ENST00000441580 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
CPSF4-206ENST00000441580 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
CPSF4-206ENST00000441580 MT1XP80297 61 aa5.41□□□□□ -1.54
CPSF4-206ENST00000441580 KRTAP10-5P60370 271 aa5.39□□□□□ -1.55
CPSF4-206ENST00000441580 LCE2BO14633 110 aa5.38□□□□□ -1.55
CPSF4-206ENST00000441580 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
CPSF4-206ENST00000441580 LCE3AQ5TA76 89 aa5.25□□□□□ -1.57
CPSF4-206ENST00000441580 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
CPSF4-206ENST00000441580 KRTAP8-1Q8IUC2 63 aa5.18□□□□□ -1.58
CPSF4-206ENST00000441580 KRTAP10-7P60409 375 aaPredicted RBP5.17□□□□□ -1.58
CPSF4-206ENST00000441580 USH2AO75445 5202 aa5.13□□□□□ -1.59
CPSF4-206ENST00000441580 LCE2DQ5TA82 110 aaPredicted RBP5.09□□□□□ -1.59
CPSF4-206ENST00000441580 KRTAP19-6Q3LI70 58 aa5.08□□□□□ -1.6
CPSF4-206ENST00000441580 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
CPSF4-206ENST00000441580 SSPOA2VEC9 5147 aa4.99□□□□□ -1.61
CPSF4-206ENST00000441580 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
CPSF4-206ENST00000441580 LUZP6Q538Z0 58 aa4.94□□□□□ -1.62
CPSF4-206ENST00000441580 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
CPSF4-206ENST00000441580 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
CPSF4-206ENST00000441580 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
CPSF4-206ENST00000441580 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
CPSF4-206ENST00000441580 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
CPSF4-206ENST00000441580 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
CPSF4-206ENST00000441580 MT1EP04732 61 aa4.75□□□□□ -1.65
CPSF4-206ENST00000441580 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
CPSF4-206ENST00000441580 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
CPSF4-206ENST00000441580 KMT2DO14686 5537 aa4.68□□□□□ -1.66
CPSF4-206ENST00000441580 MT1LQ93083 61 aa4.68□□□□□ -1.66
CPSF4-206ENST00000441580 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
CPSF4-206ENST00000441580 H3BS24 57 aa4.63□□□□□ -1.67
CPSF4-206ENST00000441580 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
CPSF4-206ENST00000441580 FSIP2Q5CZC0 6907 aa4.58□□□□□ -1.68
CPSF4-206ENST00000441580 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
CPSF4-206ENST00000441580 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
CPSF4-206ENST00000441580 MT1GP13640 62 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms