RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 KRTAP9-6A0A140TA67 174 aa7.1□□□□□ -1.27
PLOD3-205ENST00000440925 A8MUN3 132 aa7.09□□□□□ -1.27
PLOD3-205ENST00000440925 S4R3F8 94 aa7.09□□□□□ -1.27
PLOD3-205ENST00000440925 H7BZZ5 65 aa7.07□□□□□ -1.28
PLOD3-205ENST00000440925 MT2AP02795 61 aa7.07□□□□□ -1.28
PLOD3-205ENST00000440925 SPANXA2-OT1Q8N9U9 137 aa7.05□□□□□ -1.28
PLOD3-205ENST00000440925 MT1FP04733 61 aa7.02□□□□□ -1.29
PLOD3-205ENST00000440925 CSAG1Q6PB30 78 aa6.99□□□□□ -1.29
PLOD3-205ENST00000440925 NDUFC1O43677 76 aa6.97□□□□□ -1.29
PLOD3-205ENST00000440925 ACYP2P14621 99 aa6.97□□□□□ -1.29
PLOD3-205ENST00000440925 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
PLOD3-205ENST00000440925 KRTAP10-10P60014 251 aa6.9□□□□□ -1.3
PLOD3-205ENST00000440925 LCE2DQ5TA82 110 aaPredicted RBP6.9□□□□□ -1.3
PLOD3-205ENST00000440925 COA5Q86WW8 74 aa6.84□□□□□ -1.31
PLOD3-205ENST00000440925 KRTAP3-2Q9BYR7 98 aa6.84□□□□□ -1.31
PLOD3-205ENST00000440925 H0YAA0 97 aa6.82□□□□□ -1.32
PLOD3-205ENST00000440925 LCE2BO14633 110 aa6.81□□□□□ -1.32
PLOD3-205ENST00000440925 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
PLOD3-205ENST00000440925 FSIP2Q5CZC0 6907 aa6.81□□□□□ -1.32
PLOD3-205ENST00000440925 PCP4P48539 62 aa6.79□□□□□ -1.32
PLOD3-205ENST00000440925 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
PLOD3-205ENST00000440925 USH2AO75445 5202 aa6.78□□□□□ -1.32
PLOD3-205ENST00000440925 CHKB-CPT1BH3BT56 60 aa6.77□□□□□ -1.33
PLOD3-205ENST00000440925 ADM2Q7Z4H4 148 aa6.77□□□□□ -1.33
PLOD3-205ENST00000440925 P0C880 135 aa6.76□□□□□ -1.33
PLOD3-205ENST00000440925 TMEM258P61165 79 aa6.75□□□□□ -1.33
PLOD3-205ENST00000440925 ATP5EP56381 51 aaPredicted RBP6.7□□□□□ -1.34
PLOD3-205ENST00000440925 SPTSSBQ8NFR3 76 aa6.7□□□□□ -1.34
PLOD3-205ENST00000440925 SPRR2GQ9BYE4 73 aa6.69□□□□□ -1.34
PLOD3-205ENST00000440925 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
PLOD3-205ENST00000440925 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
PLOD3-205ENST00000440925 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
PLOD3-205ENST00000440925 MT1BP07438 61 aa6.58□□□□□ -1.36
PLOD3-205ENST00000440925 SERP1Q9Y6X1 66 aa6.57□□□□□ -1.36
PLOD3-205ENST00000440925 KRTAP13-4Q3LI77 160 aa6.53□□□□□ -1.36
PLOD3-205ENST00000440925 M0QZ58 72 aa6.49□□□□□ -1.37
PLOD3-205ENST00000440925 LINC01558Q9Y6Z2 57 aa6.49□□□□□ -1.37
PLOD3-205ENST00000440925 R4GN34 69 aa6.49□□□□□ -1.37
PLOD3-205ENST00000440925 Q5VV11 94 aa6.44□□□□□ -1.38
PLOD3-205ENST00000440925 RPS28P62857 69 aaKnown RBP6.42□□□□□ -1.38
PLOD3-205ENST00000440925 KRTAP19-6Q3LI70 58 aa6.42□□□□□ -1.38
PLOD3-205ENST00000440925 A0A1B0GU69 56 aa6.41□□□□□ -1.38
PLOD3-205ENST00000440925 SEC61GP60059 68 aa6.41□□□□□ -1.38
PLOD3-205ENST00000440925 A0A1B0GU33 70 aa6.4□□□□□ -1.38
PLOD3-205ENST00000440925 SPATA8Q6RVD6 105 aa6.38□□□□□ -1.39
PLOD3-205ENST00000440925 FCGBPQ9Y6R7 5405 aaPredicted RBP6.38□□□□□ -1.39
PLOD3-205ENST00000440925 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
PLOD3-205ENST00000440925 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
PLOD3-205ENST00000440925 KRTAP9-7A8MTY7 169 aa6.36□□□□□ -1.39
PLOD3-205ENST00000440925 Q1T7F1 81 aa6.35□□□□□ -1.39
PLOD3-205ENST00000440925 SMIM26A0A096LP01 95 aa6.33□□□□□ -1.4
PLOD3-205ENST00000440925 KRTAP10-5P60370 271 aa6.28□□□□□ -1.4
PLOD3-205ENST00000440925 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
PLOD3-205ENST00000440925 A6NN06 94 aa6.27□□□□□ -1.41
PLOD3-205ENST00000440925 MT1XP80297 61 aa6.26□□□□□ -1.41
PLOD3-205ENST00000440925 A0A0D9SG42 100 aa6.25□□□□□ -1.41
PLOD3-205ENST00000440925 A8MU10 97 aa6.25□□□□□ -1.41
PLOD3-205ENST00000440925 PSPHP1O15172 72 aa6.25□□□□□ -1.41
PLOD3-205ENST00000440925 PLAC4Q8WY50 150 aa6.25□□□□□ -1.41
PLOD3-205ENST00000440925 V9GYY9 64 aa6.23□□□□□ -1.41
PLOD3-205ENST00000440925 KRTAP12-1P59990 96 aa6.2□□□□□ -1.42
PLOD3-205ENST00000440925 KRTAP12-2P59991 146 aa6.18□□□□□ -1.42
PLOD3-205ENST00000440925 UQCR11O14957 56 aa6.15□□□□□ -1.42
PLOD3-205ENST00000440925 SPINT4Q6UDR6 99 aa6.1□□□□□ -1.43
PLOD3-205ENST00000440925 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
PLOD3-205ENST00000440925 MACF1Q9UPN3 7388 aaKnown RBP6.06□□□□□ -1.44
PLOD3-205ENST00000440925 PRO2289Q9P1D8 64 aa6.03□□□□□ -1.44
PLOD3-205ENST00000440925 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
PLOD3-205ENST00000440925 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
PLOD3-205ENST00000440925 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
PLOD3-205ENST00000440925 A6NED7 52 aa5.98□□□□□ -1.45
PLOD3-205ENST00000440925 C10orf95Q9H7T3 257 aa5.94□□□□□ -1.46
PLOD3-205ENST00000440925 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
PLOD3-205ENST00000440925 KMT2DO14686 5537 aa5.93□□□□□ -1.46
PLOD3-205ENST00000440925 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
PLOD3-205ENST00000440925 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.46
PLOD3-205ENST00000440925 CDC42SE1Q9NRR8 79 aa5.86□□□□□ -1.47
PLOD3-205ENST00000440925 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
PLOD3-205ENST00000440925 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
PLOD3-205ENST00000440925 K7ERS5 55 aa5.72□□□□□ -1.49
PLOD3-205ENST00000440925 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
PLOD3-205ENST00000440925 NEBP20929 6669 aa5.7□□□□□ -1.5
PLOD3-205ENST00000440925 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
PLOD3-205ENST00000440925 TNP1P09430 55 aa5.66□□□□□ -1.5
PLOD3-205ENST00000440925 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
PLOD3-205ENST00000440925 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
PLOD3-205ENST00000440925 LCE3AQ5TA76 89 aa5.61□□□□□ -1.51
PLOD3-205ENST00000440925 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
PLOD3-205ENST00000440925 SPRR2FQ96RM1 72 aa5.6□□□□□ -1.51
PLOD3-205ENST00000440925 ROMO1P60602 79 aa5.57□□□□□ -1.52
PLOD3-205ENST00000440925 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
PLOD3-205ENST00000440925 MDN1Q9NU22 5596 aa5.56□□□□□ -1.52
PLOD3-205ENST00000440925 KRTAP20-1Q3LI63 56 aa5.55□□□□□ -1.52
PLOD3-205ENST00000440925 KRTAP19-5Q3LI72 72 aa5.55□□□□□ -1.52
PLOD3-205ENST00000440925 MT1EP04732 61 aa5.5□□□□□ -1.53
PLOD3-205ENST00000440925 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
PLOD3-205ENST00000440925 PRO0628Q9UI54 55 aa5.44□□□□□ -1.54
PLOD3-205ENST00000440925 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
PLOD3-205ENST00000440925 SPRR2EP22531 72 aa5.41□□□□□ -1.54
PLOD3-205ENST00000440925 SPRR2BP35325 72 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms