RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 DNAH11Q96DT5 4516 aa3.34□□□□□ -1.88
BDNF-210ENST00000438929 KRTAP3-3Q9BYR6 98 aa3.33□□□□□ -1.88
BDNF-210ENST00000438929 KRTAP3-2Q9BYR7 98 aa3.33□□□□□ -1.88
BDNF-210ENST00000438929 ALMS1Q8TCU4 4167 aa3.32□□□□□ -1.88
BDNF-210ENST00000438929 S4R3F8 94 aa3.32□□□□□ -1.88
BDNF-210ENST00000438929 KRTAP1-4P0C5Y4 121 aa3.3□□□□□ -1.88
BDNF-210ENST00000438929 DNAH17Q9UFH2 4485 aa3.29□□□□□ -1.88
BDNF-210ENST00000438929 DNAH5Q8TE73 4624 aa3.26□□□□□ -1.89
BDNF-210ENST00000438929 R4GN34 69 aa3.26□□□□□ -1.89
BDNF-210ENST00000438929 TPRXLQ17RH7 258 aa3.24□□□□□ -1.89
BDNF-210ENST00000438929 KRTAP3-1Q9BYR8 98 aa3.24□□□□□ -1.89
BDNF-210ENST00000438929 RPS29P62273 56 aaKnown RBP3.22□□□□□ -1.89
BDNF-210ENST00000438929 M0QZ58 72 aa3.21□□□□□ -1.9
BDNF-210ENST00000438929 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
BDNF-210ENST00000438929 DNAH8Q96JB1 4490 aa3.19□□□□□ -1.9
BDNF-210ENST00000438929 DYNC1H1Q14204 4646 aaKnown RBP3.18□□□□□ -1.9
BDNF-210ENST00000438929 HSPG2P98160 4391 aa3.18□□□□□ -1.9
BDNF-210ENST00000438929 PCLOQ9Y6V0 5065 aa3.18□□□□□ -1.9
BDNF-210ENST00000438929 APOBP04114 4563 aaKnown RBP3.18□□□□□ -1.9
BDNF-210ENST00000438929 KRTAP13-4Q3LI77 160 aa3.17□□□□□ -1.9
BDNF-210ENST00000438929 LRP1BQ9NZR2 4599 aa3.16□□□□□ -1.9
BDNF-210ENST00000438929 KRTAP12-2P59991 146 aa3.15□□□□□ -1.9
BDNF-210ENST00000438929 VPS13BQ7Z7G8 4022 aa3.15□□□□□ -1.9
BDNF-210ENST00000438929 A0A1B0GVY2 172 aa3.14□□□□□ -1.91
BDNF-210ENST00000438929 BIRC6Q9NR09 4857 aa3.14□□□□□ -1.91
BDNF-210ENST00000438929 KIAA1109Q2LD37 5005 aa3.14□□□□□ -1.91
BDNF-210ENST00000438929 KRTAP10-10P60014 251 aa3.14□□□□□ -1.91
BDNF-210ENST00000438929 KRTAP10-6P60371 365 aaPredicted RBP3.14□□□□□ -1.91
BDNF-210ENST00000438929 HERC2O95714 4834 aa3.12□□□□□ -1.91
BDNF-210ENST00000438929 KRTAP17-1Q9BYP8 105 aa3.12□□□□□ -1.91
BDNF-210ENST00000438929 ABCA13Q86UQ4 5058 aa3.11□□□□□ -1.91
BDNF-210ENST00000438929 RYR1P21817 5038 aa3.1□□□□□ -1.91
BDNF-210ENST00000438929 KRTAP10-8P60410 259 aa3.1□□□□□ -1.91
BDNF-210ENST00000438929 KRTAP12-1P59990 96 aa3.09□□□□□ -1.92
BDNF-210ENST00000438929 FAT1Q14517 4588 aa3.08□□□□□ -1.92
BDNF-210ENST00000438929 PKHD1L1Q86WI1 4243 aa3.08□□□□□ -1.92
BDNF-210ENST00000438929 XP32Q5T750 250 aa3.08□□□□□ -1.92
BDNF-210ENST00000438929 MYCBP2O75592 4640 aa3.07□□□□□ -1.92
BDNF-210ENST00000438929 FAT3Q8TDW7 4589 aa3.06□□□□□ -1.92
BDNF-210ENST00000438929 HERC1Q15751 4861 aa3.02□□□□□ -1.93
BDNF-210ENST00000438929 LRP1Q07954 4544 aaKnown RBP3.02□□□□□ -1.93
BDNF-210ENST00000438929 LCE2DQ5TA82 110 aaPredicted RBP3.01□□□□□ -1.93
BDNF-210ENST00000438929 TNXBP22105 4242 aa2.99□□□□□ -1.93
BDNF-210ENST00000438929 LOC100996750A0A140TA64 210 aa2.97□□□□□ -1.93
BDNF-210ENST00000438929 KRTAP4-6Q9BYQ5 205 aa2.97□□□□□ -1.93
BDNF-210ENST00000438929 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
BDNF-210ENST00000438929 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
BDNF-210ENST00000438929 KRTAP23-1A1A580 65 aa2.96□□□□□ -1.94
BDNF-210ENST00000438929 TNP1P09430 55 aa2.94□□□□□ -1.94
BDNF-210ENST00000438929 KRTAP4-5Q9BYR2 181 aa2.94□□□□□ -1.94
BDNF-210ENST00000438929 KRTAP10-4P60372 401 aaPredicted RBP2.86□□□□□ -1.95
BDNF-210ENST00000438929 HMCN2Q8NDA2 5059 aa2.86□□□□□ -1.95
BDNF-210ENST00000438929 LORP23490 312 aaPredicted RBP2.86□□□□□ -1.95
BDNF-210ENST00000438929 LPAP08519 4548 aa2.85□□□□□ -1.95
BDNF-210ENST00000438929 UBR4Q5T4S7 5183 aa2.83□□□□□ -1.96
BDNF-210ENST00000438929 MUC2Q02817 5179 aa2.8□□□□□ -1.96
BDNF-210ENST00000438929 INE1O15225 51 aa2.79□□□□□ -1.96
BDNF-210ENST00000438929 RNF213Q63HN8 5207 aa2.78□□□□□ -1.96
BDNF-210ENST00000438929 LRP2P98164 4655 aa2.78□□□□□ -1.96
BDNF-210ENST00000438929 MT1HL1P0DM35 61 aa2.76□□□□□ -1.97
BDNF-210ENST00000438929 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
BDNF-210ENST00000438929 CRCT1Q9UGL9 99 aa2.72□□□□□ -1.97
BDNF-210ENST00000438929 LCE2BO14633 110 aa2.72□□□□□ -1.97
BDNF-210ENST00000438929 LCE2CQ5TA81 110 aa2.7□□□□□ -1.98
BDNF-210ENST00000438929 LCE2AQ5TA79 106 aaPredicted RBP2.68□□□□□ -1.98
BDNF-210ENST00000438929 MUC17Q685J3 4493 aa2.65□□□□□ -1.98
BDNF-210ENST00000438929 FAT4Q6V0I7 4981 aa2.63□□□□□ -1.99
BDNF-210ENST00000438929 MACF1Q9UPN3 7388 aaKnown RBP2.63□□□□□ -1.99
BDNF-210ENST00000438929 KRTAP4-1Q9BYQ7 146 aa2.6□□□□□ -1.99
BDNF-210ENST00000438929 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
BDNF-210ENST00000438929 FLGP20930 4061 aaPredicted RBP2.57□□□□□ -2
BDNF-210ENST00000438929 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
BDNF-210ENST00000438929 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
BDNF-210ENST00000438929 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
BDNF-210ENST00000438929 FSIP2Q5CZC0 6907 aa2.51□□□□□ -2.01
BDNF-210ENST00000438929 KRTAP8-1Q8IUC2 63 aa2.5□□□□□ -2.01
BDNF-210ENST00000438929 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
BDNF-210ENST00000438929 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
BDNF-210ENST00000438929 KRTAP4-8Q9BYQ9 185 aa2.48□□□□□ -2.01
BDNF-210ENST00000438929 DSTQ03001 7570 aaKnown RBP2.48□□□□□ -2.01
BDNF-210ENST00000438929 SPRR2FQ96RM1 72 aa2.46□□□□□ -2.02
BDNF-210ENST00000438929 KRTAP19-2Q3LHN2 52 aa2.45□□□□□ -2.02
BDNF-210ENST00000438929 SPRR2GQ9BYE4 73 aa2.42□□□□□ -2.02
BDNF-210ENST00000438929 KRTAP19-4Q3LI73 84 aa2.4□□□□□ -2.03
BDNF-210ENST00000438929 KRTAP10-7P60409 375 aaPredicted RBP2.4□□□□□ -2.03
BDNF-210ENST00000438929 KRTAP19-1Q8IUB9 90 aa2.39□□□□□ -2.03
BDNF-210ENST00000438929 KRTAP4-7Q9BYR0 210 aa2.36□□□□□ -2.03
BDNF-210ENST00000438929 MT1HP80294 61 aa2.35□□□□□ -2.03
BDNF-210ENST00000438929 MT1FP04733 61 aa2.35□□□□□ -2.03
BDNF-210ENST00000438929 MT2AP02795 61 aa2.34□□□□□ -2.03
BDNF-210ENST00000438929 KRTAP4-8A0A0G2JLE6 195 aa2.33□□□□□ -2.04
BDNF-210ENST00000438929 SPRR2EP22531 72 aa2.33□□□□□ -2.04
BDNF-210ENST00000438929 SPRR2BP35325 72 aa2.33□□□□□ -2.04
BDNF-210ENST00000438929 SPRR2AP35326 72 aa2.33□□□□□ -2.04
BDNF-210ENST00000438929 KRTAP9-6A0A140TA67 174 aa2.33□□□□□ -2.04
BDNF-210ENST00000438929 USH2AO75445 5202 aa2.32□□□□□ -2.04
BDNF-210ENST00000438929 KRTAP9-2Q9BYQ4 174 aa2.32□□□□□ -2.04
BDNF-210ENST00000438929 SYNE2Q8WXH0 6885 aaKnown RBP2.31□□□□□ -2.04
BDNF-210ENST00000438929 KRTAP19-5Q3LI72 72 aa2.29□□□□□ -2.04
BDNF-210ENST00000438929 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 465 ms